Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01972

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01970 and MPMX26_01971 are separated by 169 nucleotidesMPMX26_01971 and MPMX26_01972 are separated by 107 nucleotidesMPMX26_01972 and MPMX26_01973 are separated by 428 nucleotides MPMX26_01970: MPMX26_01970 - Cysteine--tRNA ligase, at 2,024,810 to 2,026,231 _01970 MPMX26_01971: MPMX26_01971 - tRNA-Gly, at 2,026,401 to 2,026,476 _01971 MPMX26_01972: MPMX26_01972 - hypothetical protein, at 2,026,584 to 2,027,048 _01972 MPMX26_01973: MPMX26_01973 - hypothetical protein, at 2,027,477 to 2,028,265 _01973 Position (kb) 2026 2027 2028Strain fitness (log2 ratio) -1 0 1 2at 2026.356 kb on + strandat 2026.368 kb on + strandat 2026.368 kb on + strandat 2026.368 kb on + strandat 2026.368 kb on + strandat 2026.368 kb on + strandat 2026.368 kb on + strandat 2026.373 kb on + strandat 2026.488 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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2,026,356 + +0.2
2,026,368 + -0.4
2,026,368 + -0.7
2,026,368 + -1.1
2,026,368 + +0.1
2,026,368 + +0.8
2,026,368 + +0.2
2,026,373 + +2.3
2,026,488 + +0.4

Or see this region's nucleotide sequence