Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01831

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01829 and MPMX26_01830 overlap by 20 nucleotidesMPMX26_01830 and MPMX26_01831 overlap by 4 nucleotidesMPMX26_01831 and MPMX26_01832 are separated by 46 nucleotidesMPMX26_01832 and MPMX26_01833 are separated by 128 nucleotides MPMX26_01829: MPMX26_01829 - hypothetical protein, at 1,876,413 to 1,877,147 _01829 MPMX26_01830: MPMX26_01830 - hypothetical protein, at 1,877,128 to 1,878,093 _01830 MPMX26_01831: MPMX26_01831 - hypothetical protein, at 1,878,090 to 1,878,761 _01831 MPMX26_01832: MPMX26_01832 - hypothetical protein, at 1,878,808 to 1,879,014 _01832 MPMX26_01833: MPMX26_01833 - LexA repressor, at 1,879,143 to 1,879,895 _01833 Position (kb) 1878 1879Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 1878.335 kb on + strand, within MPMX26_01831at 1878.769 kb on + strandat 1878.797 kb on + strandat 1878.797 kb on + strandat 1878.797 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,878,335 + MPMX26_01831 0.36 -6.0
1,878,769 + -0.3
1,878,797 + -0.9
1,878,797 + -1.0
1,878,797 + -1.3

Or see this region's nucleotide sequence