Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01683

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01682 and MPMX26_01683 are separated by 226 nucleotidesMPMX26_01683 and MPMX26_01684 are separated by 86 nucleotidesMPMX26_01684 and MPMX26_01685 are separated by 114 nucleotides MPMX26_01682: MPMX26_01682 - CTP synthase, at 1,737,110 to 1,738,750 _01682 MPMX26_01683: MPMX26_01683 - hypothetical protein, at 1,738,977 to 1,739,408 _01683 MPMX26_01684: MPMX26_01684 - hypothetical protein, at 1,739,495 to 1,739,905 _01684 MPMX26_01685: MPMX26_01685 - hypothetical protein, at 1,740,020 to 1,741,120 _01685 Position (kb) 1738 1739 1740Strain fitness (log2 ratio) -3 -2 -1 0 1at 1739.016 kb on + strandat 1739.016 kb on + strandat 1739.016 kb on + strandat 1739.016 kb on + strandat 1739.021 kb on + strand, within MPMX26_01683at 1739.025 kb on + strand, within MPMX26_01683at 1739.082 kb on + strand, within MPMX26_01683at 1739.109 kb on + strand, within MPMX26_01683at 1739.114 kb on + strand, within MPMX26_01683at 1739.122 kb on + strand, within MPMX26_01683at 1739.122 kb on + strand, within MPMX26_01683at 1739.122 kb on + strand, within MPMX26_01683at 1739.132 kb on + strand, within MPMX26_01683at 1739.132 kb on + strand, within MPMX26_01683at 1739.229 kb on + strand, within MPMX26_01683at 1739.233 kb on + strand, within MPMX26_01683at 1739.235 kb on + strand, within MPMX26_01683at 1739.240 kb on + strand, within MPMX26_01683at 1739.252 kb on + strand, within MPMX26_01683at 1739.252 kb on + strand, within MPMX26_01683at 1739.252 kb on + strand, within MPMX26_01683at 1739.252 kb on + strand, within MPMX26_01683at 1739.252 kb on + strand, within MPMX26_01683at 1739.272 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.279 kb on + strand, within MPMX26_01683at 1739.307 kb on + strand, within MPMX26_01683at 1739.309 kb on + strand, within MPMX26_01683at 1739.340 kb on + strand, within MPMX26_01683at 1739.340 kb on + strand, within MPMX26_01683at 1739.350 kb on + strand, within MPMX26_01683at 1739.350 kb on + strand, within MPMX26_01683at 1739.350 kb on + strand, within MPMX26_01683at 1739.373 kb on + strandat 1739.807 kb on - strand, within MPMX26_01684at 1740.103 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,739,016 + -0.9
1,739,016 + -1.8
1,739,016 + -1.0
1,739,016 + -0.5
1,739,021 + MPMX26_01683 0.10 -0.6
1,739,025 + MPMX26_01683 0.11 -0.3
1,739,082 + MPMX26_01683 0.24 -1.4
1,739,109 + MPMX26_01683 0.31 -1.0
1,739,114 + MPMX26_01683 0.32 -0.9
1,739,122 + MPMX26_01683 0.34 -2.0
1,739,122 + MPMX26_01683 0.34 -0.9
1,739,122 + MPMX26_01683 0.34 -0.4
1,739,132 + MPMX26_01683 0.36 -1.0
1,739,132 + MPMX26_01683 0.36 -1.1
1,739,229 + MPMX26_01683 0.58 -1.1
1,739,233 + MPMX26_01683 0.59 -0.7
1,739,235 + MPMX26_01683 0.60 -0.7
1,739,240 + MPMX26_01683 0.61 -1.8
1,739,252 + MPMX26_01683 0.64 -0.9
1,739,252 + MPMX26_01683 0.64 -2.2
1,739,252 + MPMX26_01683 0.64 -0.9
1,739,252 + MPMX26_01683 0.64 -1.3
1,739,252 + MPMX26_01683 0.64 -0.4
1,739,272 + MPMX26_01683 0.68 -1.3
1,739,279 + MPMX26_01683 0.70 -1.1
1,739,279 + MPMX26_01683 0.70 -1.7
1,739,279 + MPMX26_01683 0.70 -1.7
1,739,279 + MPMX26_01683 0.70 -2.9
1,739,279 + MPMX26_01683 0.70 -1.2
1,739,279 + MPMX26_01683 0.70 -1.0
1,739,279 + MPMX26_01683 0.70 -0.7
1,739,279 + MPMX26_01683 0.70 +1.3
1,739,279 + MPMX26_01683 0.70 -1.9
1,739,279 + MPMX26_01683 0.70 -1.1
1,739,279 + MPMX26_01683 0.70 -0.6
1,739,279 + MPMX26_01683 0.70 -0.9
1,739,279 + MPMX26_01683 0.70 -1.5
1,739,279 + MPMX26_01683 0.70 -0.8
1,739,307 + MPMX26_01683 0.76 -1.5
1,739,309 + MPMX26_01683 0.77 +0.2
1,739,340 + MPMX26_01683 0.84 -1.1
1,739,340 + MPMX26_01683 0.84 -1.3
1,739,350 + MPMX26_01683 0.86 -1.5
1,739,350 + MPMX26_01683 0.86 -2.4
1,739,350 + MPMX26_01683 0.86 -1.5
1,739,373 + -1.1
1,739,807 - MPMX26_01684 0.76 -1.0
1,740,103 - +0.8

Or see this region's nucleotide sequence