Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01587

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01586 and MPMX26_01587 are separated by 24 nucleotidesMPMX26_01587 and MPMX26_01588 are separated by 41 nucleotidesMPMX26_01588 and MPMX26_01589 overlap by 4 nucleotides MPMX26_01586: MPMX26_01586 - putative transporter, at 1,645,883 to 1,647,085 _01586 MPMX26_01587: MPMX26_01587 - hypothetical protein, at 1,647,110 to 1,648,375 _01587 MPMX26_01588: MPMX26_01588 - 3-oxoadipate CoA-transferase subunit B, at 1,648,417 to 1,649,067 _01588 MPMX26_01589: MPMX26_01589 - 3-oxoadipate CoA-transferase subunit A, at 1,649,064 to 1,649,738 _01589 Position (kb) 1647 1648 1649Strain fitness (log2 ratio) -3 -2 -1 0 1at 1647.656 kb on - strand, within MPMX26_01587at 1648.835 kb on - strand, within MPMX26_01588at 1649.350 kb on + strand, within MPMX26_01589

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,647,656 - MPMX26_01587 0.43 -3.7
1,648,835 - MPMX26_01588 0.64 -1.3
1,649,350 + MPMX26_01589 0.42 -1.9

Or see this region's nucleotide sequence