Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01339

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01337 and MPMX26_01338 are separated by 217 nucleotidesMPMX26_01338 and MPMX26_01339 are separated by 130 nucleotidesMPMX26_01339 and MPMX26_01340 are separated by 12 nucleotides MPMX26_01337: MPMX26_01337 - hypothetical protein, at 1,412,579 to 1,412,881 _01337 MPMX26_01338: MPMX26_01338 - hypothetical protein, at 1,413,099 to 1,413,443 _01338 MPMX26_01339: MPMX26_01339 - 50S ribosomal protein L3 glutamine methyltransferase, at 1,413,574 to 1,414,584 _01339 MPMX26_01340: MPMX26_01340 - Chorismate synthase, at 1,414,597 to 1,415,688 _01340 Position (kb) 1413 1414 1415Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1412.609 kb on - strandat 1412.709 kb on - strand, within MPMX26_01337at 1412.719 kb on - strand, within MPMX26_01337at 1412.719 kb on - strand, within MPMX26_01337at 1412.719 kb on - strand, within MPMX26_01337at 1412.719 kb on - strand, within MPMX26_01337at 1413.658 kb on + strandat 1413.696 kb on + strand, within MPMX26_01339at 1413.727 kb on + strand, within MPMX26_01339at 1413.727 kb on + strand, within MPMX26_01339at 1413.782 kb on + strand, within MPMX26_01339at 1413.836 kb on + strand, within MPMX26_01339at 1413.836 kb on + strand, within MPMX26_01339at 1413.836 kb on + strand, within MPMX26_01339at 1413.836 kb on + strand, within MPMX26_01339at 1413.836 kb on + strand, within MPMX26_01339at 1413.836 kb on + strand, within MPMX26_01339at 1413.836 kb on + strand, within MPMX26_01339at 1413.906 kb on + strand, within MPMX26_01339at 1413.915 kb on + strand, within MPMX26_01339at 1413.964 kb on + strand, within MPMX26_01339at 1413.969 kb on + strand, within MPMX26_01339at 1413.979 kb on + strand, within MPMX26_01339at 1413.993 kb on + strand, within MPMX26_01339at 1414.025 kb on + strand, within MPMX26_01339at 1414.025 kb on + strand, within MPMX26_01339at 1414.059 kb on + strand, within MPMX26_01339at 1414.069 kb on + strand, within MPMX26_01339at 1414.095 kb on + strand, within MPMX26_01339at 1414.095 kb on + strand, within MPMX26_01339at 1414.095 kb on + strand, within MPMX26_01339at 1414.095 kb on + strand, within MPMX26_01339at 1414.095 kb on + strand, within MPMX26_01339at 1414.095 kb on + strand, within MPMX26_01339at 1414.095 kb on + strand, within MPMX26_01339at 1414.095 kb on + strand, within MPMX26_01339at 1414.119 kb on + strand, within MPMX26_01339at 1414.164 kb on + strand, within MPMX26_01339at 1414.164 kb on + strand, within MPMX26_01339at 1414.164 kb on + strand, within MPMX26_01339at 1414.164 kb on + strand, within MPMX26_01339at 1414.164 kb on + strand, within MPMX26_01339at 1414.164 kb on + strand, within MPMX26_01339at 1414.164 kb on + strand, within MPMX26_01339at 1414.164 kb on + strand, within MPMX26_01339at 1414.174 kb on + strand, within MPMX26_01339at 1414.201 kb on + strand, within MPMX26_01339at 1414.272 kb on + strand, within MPMX26_01339at 1414.290 kb on + strand, within MPMX26_01339at 1414.295 kb on + strand, within MPMX26_01339at 1414.295 kb on + strand, within MPMX26_01339at 1414.295 kb on + strand, within MPMX26_01339at 1414.295 kb on + strand, within MPMX26_01339at 1414.295 kb on + strand, within MPMX26_01339at 1414.320 kb on + strand, within MPMX26_01339at 1414.325 kb on + strand, within MPMX26_01339at 1414.335 kb on + strand, within MPMX26_01339at 1414.353 kb on + strand, within MPMX26_01339at 1414.358 kb on + strand, within MPMX26_01339at 1414.358 kb on + strand, within MPMX26_01339at 1414.358 kb on + strand, within MPMX26_01339at 1414.363 kb on + strand, within MPMX26_01339at 1414.383 kb on + strand, within MPMX26_01339at 1414.383 kb on + strand, within MPMX26_01339at 1414.383 kb on + strand, within MPMX26_01339at 1414.383 kb on + strand, within MPMX26_01339at 1414.383 kb on + strand, within MPMX26_01339at 1414.389 kb on + strand, within MPMX26_01339at 1414.425 kb on + strand, within MPMX26_01339at 1414.529 kb on + strandat 1414.529 kb on + strandat 1414.529 kb on + strandat 1414.529 kb on + strandat 1414.539 kb on + strandat 1414.539 kb on + strandat 1414.571 kb on + strandat 1414.579 kb on + strandat 1414.579 kb on + strandat 1414.579 kb on + strandat 1414.579 kb on + strandat 1415.448 kb on + strand, within MPMX26_01340

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,412,609 - -1.1
1,412,709 - MPMX26_01337 0.43 -1.4
1,412,719 - MPMX26_01337 0.46 -0.3
1,412,719 - MPMX26_01337 0.46 +0.6
1,412,719 - MPMX26_01337 0.46 +0.2
1,412,719 - MPMX26_01337 0.46 +0.1
1,413,658 + -1.9
1,413,696 + MPMX26_01339 0.12 -2.0
1,413,727 + MPMX26_01339 0.15 -2.8
1,413,727 + MPMX26_01339 0.15 -2.7
1,413,782 + MPMX26_01339 0.21 -1.4
1,413,836 + MPMX26_01339 0.26 -2.9
1,413,836 + MPMX26_01339 0.26 -2.1
1,413,836 + MPMX26_01339 0.26 -1.7
1,413,836 + MPMX26_01339 0.26 -1.7
1,413,836 + MPMX26_01339 0.26 -2.7
1,413,836 + MPMX26_01339 0.26 -1.0
1,413,836 + MPMX26_01339 0.26 -2.5
1,413,906 + MPMX26_01339 0.33 -1.6
1,413,915 + MPMX26_01339 0.34 -2.2
1,413,964 + MPMX26_01339 0.39 -0.4
1,413,969 + MPMX26_01339 0.39 -1.9
1,413,979 + MPMX26_01339 0.40 -2.6
1,413,993 + MPMX26_01339 0.41 -1.7
1,414,025 + MPMX26_01339 0.45 -1.0
1,414,025 + MPMX26_01339 0.45 -1.6
1,414,059 + MPMX26_01339 0.48 -1.2
1,414,069 + MPMX26_01339 0.49 -2.9
1,414,095 + MPMX26_01339 0.52 -2.3
1,414,095 + MPMX26_01339 0.52 -2.0
1,414,095 + MPMX26_01339 0.52 -3.6
1,414,095 + MPMX26_01339 0.52 -3.7
1,414,095 + MPMX26_01339 0.52 -2.0
1,414,095 + MPMX26_01339 0.52 -4.0
1,414,095 + MPMX26_01339 0.52 -2.8
1,414,095 + MPMX26_01339 0.52 -1.2
1,414,119 + MPMX26_01339 0.54 -2.0
1,414,164 + MPMX26_01339 0.58 -0.7
1,414,164 + MPMX26_01339 0.58 -3.3
1,414,164 + MPMX26_01339 0.58 -2.7
1,414,164 + MPMX26_01339 0.58 -2.1
1,414,164 + MPMX26_01339 0.58 -2.6
1,414,164 + MPMX26_01339 0.58 -3.2
1,414,164 + MPMX26_01339 0.58 -2.9
1,414,164 + MPMX26_01339 0.58 -2.5
1,414,174 + MPMX26_01339 0.59 -3.8
1,414,201 + MPMX26_01339 0.62 -1.9
1,414,272 + MPMX26_01339 0.69 -1.2
1,414,290 + MPMX26_01339 0.71 -3.6
1,414,295 + MPMX26_01339 0.71 -3.4
1,414,295 + MPMX26_01339 0.71 -2.1
1,414,295 + MPMX26_01339 0.71 -1.2
1,414,295 + MPMX26_01339 0.71 +0.6
1,414,295 + MPMX26_01339 0.71 -2.5
1,414,320 + MPMX26_01339 0.74 -2.0
1,414,325 + MPMX26_01339 0.74 -0.6
1,414,335 + MPMX26_01339 0.75 -3.4
1,414,353 + MPMX26_01339 0.77 -1.7
1,414,358 + MPMX26_01339 0.78 -4.2
1,414,358 + MPMX26_01339 0.78 -2.1
1,414,358 + MPMX26_01339 0.78 -1.6
1,414,363 + MPMX26_01339 0.78 -1.7
1,414,383 + MPMX26_01339 0.80 -2.7
1,414,383 + MPMX26_01339 0.80 -3.1
1,414,383 + MPMX26_01339 0.80 -2.3
1,414,383 + MPMX26_01339 0.80 -2.8
1,414,383 + MPMX26_01339 0.80 -3.2
1,414,389 + MPMX26_01339 0.81 -2.7
1,414,425 + MPMX26_01339 0.84 -3.0
1,414,529 + -1.9
1,414,529 + -2.0
1,414,529 + -2.0
1,414,529 + -2.9
1,414,539 + -1.1
1,414,539 + -0.1
1,414,571 + +0.5
1,414,579 + -2.5
1,414,579 + +0.2
1,414,579 + +0.2
1,414,579 + -0.1
1,415,448 + MPMX26_01340 0.78 -1.4

Or see this region's nucleotide sequence