Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01294

Experiment: Ethanolamine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_01293 and MPMX26_01294 are separated by 339 nucleotidesMPMX26_01294 and MPMX26_01295 are separated by 58 nucleotidesMPMX26_01295 and MPMX26_01296 are separated by 77 nucleotides MPMX26_01293: MPMX26_01293 - Sensory histidine kinase/phosphatase NtrB, at 1,368,934 to 1,370,043 _01293 MPMX26_01294: MPMX26_01294 - Ribosomal protein S12 methylthiotransferase RimO, at 1,370,383 to 1,371,726 _01294 MPMX26_01295: MPMX26_01295 - Uridylate kinase, at 1,371,785 to 1,372,513 _01295 MPMX26_01296: MPMX26_01296 - Ribosome-recycling factor, at 1,372,591 to 1,373,145 _01296 Position (kb) 1370 1371 1372Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1369.407 kb on - strand, within MPMX26_01293at 1369.416 kb on - strand, within MPMX26_01293at 1369.613 kb on - strand, within MPMX26_01293at 1369.813 kb on - strand, within MPMX26_01293at 1369.813 kb on - strand, within MPMX26_01293at 1369.932 kb on - strand, within MPMX26_01293at 1370.001 kb on - strandat 1370.362 kb on + strandat 1370.548 kb on + strand, within MPMX26_01294at 1370.548 kb on + strand, within MPMX26_01294at 1370.548 kb on + strand, within MPMX26_01294at 1370.707 kb on + strand, within MPMX26_01294at 1370.715 kb on + strand, within MPMX26_01294at 1370.725 kb on + strand, within MPMX26_01294at 1370.728 kb on + strand, within MPMX26_01294at 1370.764 kb on + strand, within MPMX26_01294at 1370.810 kb on + strand, within MPMX26_01294at 1370.818 kb on + strand, within MPMX26_01294at 1370.818 kb on + strand, within MPMX26_01294at 1370.829 kb on + strand, within MPMX26_01294at 1370.831 kb on + strand, within MPMX26_01294at 1370.843 kb on + strand, within MPMX26_01294at 1370.848 kb on + strand, within MPMX26_01294at 1370.866 kb on + strand, within MPMX26_01294at 1370.888 kb on + strand, within MPMX26_01294at 1370.911 kb on + strand, within MPMX26_01294at 1370.911 kb on + strand, within MPMX26_01294at 1370.955 kb on + strand, within MPMX26_01294at 1370.959 kb on + strand, within MPMX26_01294at 1370.960 kb on + strand, within MPMX26_01294at 1370.985 kb on + strand, within MPMX26_01294at 1371.039 kb on + strand, within MPMX26_01294at 1371.039 kb on + strand, within MPMX26_01294at 1371.046 kb on + strand, within MPMX26_01294at 1371.046 kb on + strand, within MPMX26_01294at 1371.046 kb on + strand, within MPMX26_01294at 1371.046 kb on + strand, within MPMX26_01294at 1371.046 kb on + strand, within MPMX26_01294at 1371.078 kb on + strand, within MPMX26_01294at 1371.084 kb on + strand, within MPMX26_01294at 1371.084 kb on + strand, within MPMX26_01294at 1371.084 kb on + strand, within MPMX26_01294at 1371.084 kb on + strand, within MPMX26_01294at 1371.084 kb on + strand, within MPMX26_01294at 1371.090 kb on + strand, within MPMX26_01294at 1371.100 kb on + strand, within MPMX26_01294at 1371.112 kb on + strand, within MPMX26_01294at 1371.112 kb on + strand, within MPMX26_01294at 1371.112 kb on + strand, within MPMX26_01294at 1371.112 kb on + strand, within MPMX26_01294at 1371.132 kb on + strand, within MPMX26_01294at 1371.132 kb on + strand, within MPMX26_01294at 1371.138 kb on + strand, within MPMX26_01294at 1371.138 kb on + strand, within MPMX26_01294at 1371.138 kb on + strand, within MPMX26_01294at 1371.184 kb on + strand, within MPMX26_01294at 1371.184 kb on + strand, within MPMX26_01294at 1371.203 kb on + strand, within MPMX26_01294at 1371.339 kb on + strand, within MPMX26_01294at 1371.349 kb on + strand, within MPMX26_01294at 1371.357 kb on + strand, within MPMX26_01294at 1371.371 kb on + strand, within MPMX26_01294at 1371.371 kb on + strand, within MPMX26_01294at 1371.371 kb on + strand, within MPMX26_01294at 1371.385 kb on + strand, within MPMX26_01294at 1371.385 kb on + strand, within MPMX26_01294at 1371.511 kb on + strand, within MPMX26_01294at 1371.573 kb on + strand, within MPMX26_01294at 1371.573 kb on + strand, within MPMX26_01294at 1371.573 kb on + strand, within MPMX26_01294at 1371.573 kb on + strand, within MPMX26_01294at 1371.573 kb on + strand, within MPMX26_01294at 1371.575 kb on + strand, within MPMX26_01294at 1371.683 kb on + strandat 1371.695 kb on + strandat 1371.700 kb on + strandat 1371.702 kb on + strandat 1371.702 kb on + strandat 1371.702 kb on + strandat 1372.507 kb on + strandat 1372.524 kb on + strandat 1372.534 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
remove
1,369,407 - MPMX26_01293 0.43 -3.2
1,369,416 - MPMX26_01293 0.43 -2.3
1,369,613 - MPMX26_01293 0.61 -2.0
1,369,813 - MPMX26_01293 0.79 -1.4
1,369,813 - MPMX26_01293 0.79 -2.3
1,369,932 - MPMX26_01293 0.90 -3.3
1,370,001 - -2.2
1,370,362 + -1.3
1,370,548 + MPMX26_01294 0.12 -2.0
1,370,548 + MPMX26_01294 0.12 +0.0
1,370,548 + MPMX26_01294 0.12 -1.0
1,370,707 + MPMX26_01294 0.24 +0.9
1,370,715 + MPMX26_01294 0.25 -0.3
1,370,725 + MPMX26_01294 0.25 -1.6
1,370,728 + MPMX26_01294 0.26 -4.1
1,370,764 + MPMX26_01294 0.28 -1.7
1,370,810 + MPMX26_01294 0.32 -1.7
1,370,818 + MPMX26_01294 0.32 -1.7
1,370,818 + MPMX26_01294 0.32 -1.7
1,370,829 + MPMX26_01294 0.33 -1.2
1,370,831 + MPMX26_01294 0.33 -3.3
1,370,843 + MPMX26_01294 0.34 +1.1
1,370,848 + MPMX26_01294 0.35 -1.6
1,370,866 + MPMX26_01294 0.36 -2.9
1,370,888 + MPMX26_01294 0.38 -1.3
1,370,911 + MPMX26_01294 0.39 -0.2
1,370,911 + MPMX26_01294 0.39 -1.0
1,370,955 + MPMX26_01294 0.43 -0.3
1,370,959 + MPMX26_01294 0.43 -1.2
1,370,960 + MPMX26_01294 0.43 -0.7
1,370,985 + MPMX26_01294 0.45 -1.2
1,371,039 + MPMX26_01294 0.49 -1.5
1,371,039 + MPMX26_01294 0.49 -1.5
1,371,046 + MPMX26_01294 0.49 +0.2
1,371,046 + MPMX26_01294 0.49 -0.4
1,371,046 + MPMX26_01294 0.49 -0.9
1,371,046 + MPMX26_01294 0.49 -0.9
1,371,046 + MPMX26_01294 0.49 -2.3
1,371,078 + MPMX26_01294 0.52 -1.1
1,371,084 + MPMX26_01294 0.52 -1.2
1,371,084 + MPMX26_01294 0.52 -1.5
1,371,084 + MPMX26_01294 0.52 -1.4
1,371,084 + MPMX26_01294 0.52 -0.4
1,371,084 + MPMX26_01294 0.52 -1.0
1,371,090 + MPMX26_01294 0.53 -0.5
1,371,100 + MPMX26_01294 0.53 -0.3
1,371,112 + MPMX26_01294 0.54 -1.1
1,371,112 + MPMX26_01294 0.54 -0.8
1,371,112 + MPMX26_01294 0.54 -2.8
1,371,112 + MPMX26_01294 0.54 -0.0
1,371,132 + MPMX26_01294 0.56 -1.0
1,371,132 + MPMX26_01294 0.56 -0.5
1,371,138 + MPMX26_01294 0.56 -0.2
1,371,138 + MPMX26_01294 0.56 -1.0
1,371,138 + MPMX26_01294 0.56 -0.7
1,371,184 + MPMX26_01294 0.60 -0.5
1,371,184 + MPMX26_01294 0.60 -0.7
1,371,203 + MPMX26_01294 0.61 -1.2
1,371,339 + MPMX26_01294 0.71 -0.1
1,371,349 + MPMX26_01294 0.72 -0.5
1,371,357 + MPMX26_01294 0.72 +0.5
1,371,371 + MPMX26_01294 0.74 +0.5
1,371,371 + MPMX26_01294 0.74 +0.7
1,371,371 + MPMX26_01294 0.74 -0.5
1,371,385 + MPMX26_01294 0.75 -1.4
1,371,385 + MPMX26_01294 0.75 -0.6
1,371,511 + MPMX26_01294 0.84 -1.4
1,371,573 + MPMX26_01294 0.89 -0.5
1,371,573 + MPMX26_01294 0.89 -1.5
1,371,573 + MPMX26_01294 0.89 -0.2
1,371,573 + MPMX26_01294 0.89 -0.3
1,371,573 + MPMX26_01294 0.89 -0.2
1,371,575 + MPMX26_01294 0.89 -0.4
1,371,683 + -0.8
1,371,695 + -0.3
1,371,700 + +0.2
1,371,702 + -1.6
1,371,702 + -1.0
1,371,702 + +0.0
1,372,507 + -2.1
1,372,524 + -4.4
1,372,534 + -2.7

Or see this region's nucleotide sequence