Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01279

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01278 and MPMX26_01279 are separated by 105 nucleotidesMPMX26_01279 and MPMX26_01280 overlap by 1 nucleotidesMPMX26_01280 and MPMX26_01281 are separated by 86 nucleotides MPMX26_01278: MPMX26_01278 - L-threonine dehydratase biosynthetic IlvA, at 1,353,937 to 1,355,475 _01278 MPMX26_01279: MPMX26_01279 - Ribose-5-phosphate isomerase A, at 1,355,581 to 1,356,252 _01279 MPMX26_01280: MPMX26_01280 - hypothetical protein, at 1,356,252 to 1,356,926 _01280 MPMX26_01281: MPMX26_01281 - N-acetyl-gamma-glutamyl-phosphate reductase, at 1,357,013 to 1,358,062 _01281 Position (kb) 1355 1356 1357Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 1354.639 kb on - strand, within MPMX26_01278at 1354.690 kb on - strand, within MPMX26_01278at 1354.705 kb on - strand, within MPMX26_01278at 1354.711 kb on - strand, within MPMX26_01278at 1354.767 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.789 kb on - strand, within MPMX26_01278at 1354.798 kb on - strand, within MPMX26_01278at 1354.842 kb on - strand, within MPMX26_01278at 1354.853 kb on - strand, within MPMX26_01278at 1354.915 kb on - strand, within MPMX26_01278at 1354.926 kb on - strand, within MPMX26_01278at 1354.948 kb on - strand, within MPMX26_01278at 1355.013 kb on - strand, within MPMX26_01278at 1355.013 kb on - strand, within MPMX26_01278at 1355.013 kb on - strand, within MPMX26_01278at 1355.026 kb on - strand, within MPMX26_01278at 1355.026 kb on - strand, within MPMX26_01278at 1355.044 kb on - strand, within MPMX26_01278at 1355.124 kb on - strand, within MPMX26_01278at 1355.148 kb on - strand, within MPMX26_01278at 1355.226 kb on - strand, within MPMX26_01278at 1355.238 kb on - strand, within MPMX26_01278at 1355.289 kb on - strand, within MPMX26_01278at 1355.290 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.313 kb on - strand, within MPMX26_01278at 1355.315 kb on - strand, within MPMX26_01278at 1355.355 kb on - strandat 1355.410 kb on - strandat 1355.410 kb on - strandat 1355.410 kb on - strandat 1356.237 kb on + strandat 1356.237 kb on + strandat 1356.260 kb on + strandat 1356.328 kb on + strand, within MPMX26_01280at 1356.351 kb on + strand, within MPMX26_01280at 1356.410 kb on + strand, within MPMX26_01280at 1356.421 kb on + strand, within MPMX26_01280at 1356.421 kb on + strand, within MPMX26_01280at 1356.429 kb on + strand, within MPMX26_01280at 1356.798 kb on + strand, within MPMX26_01280at 1357.036 kb on + strandat 1357.042 kb on + strandat 1357.043 kb on + strandat 1357.045 kb on + strandat 1357.052 kb on + strandat 1357.067 kb on + strandat 1357.083 kb on + strandat 1357.091 kb on + strandat 1357.091 kb on + strandat 1357.091 kb on + strandat 1357.091 kb on + strandat 1357.091 kb on + strandat 1357.091 kb on + strandat 1357.091 kb on + strandat 1357.091 kb on + strandat 1357.091 kb on + strandat 1357.103 kb on + strandat 1357.103 kb on + strandat 1357.103 kb on + strandat 1357.103 kb on + strandat 1357.103 kb on + strandat 1357.134 kb on + strand, within MPMX26_01281at 1357.139 kb on + strand, within MPMX26_01281at 1357.147 kb on + strand, within MPMX26_01281at 1357.147 kb on + strand, within MPMX26_01281at 1357.147 kb on + strand, within MPMX26_01281at 1357.149 kb on + strand, within MPMX26_01281at 1357.149 kb on + strand, within MPMX26_01281at 1357.212 kb on + strand, within MPMX26_01281at 1357.225 kb on + strand, within MPMX26_01281at 1357.245 kb on + strand, within MPMX26_01281at 1357.245 kb on + strand, within MPMX26_01281at 1357.245 kb on + strand, within MPMX26_01281at 1357.245 kb on + strand, within MPMX26_01281at 1357.245 kb on + strand, within MPMX26_01281

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,354,639 - MPMX26_01278 0.46 -5.4
1,354,690 - MPMX26_01278 0.49 -6.2
1,354,705 - MPMX26_01278 0.50 -3.2
1,354,711 - MPMX26_01278 0.50 -3.7
1,354,767 - MPMX26_01278 0.54 -5.3
1,354,789 - MPMX26_01278 0.55 -4.2
1,354,789 - MPMX26_01278 0.55 -5.2
1,354,789 - MPMX26_01278 0.55 -5.9
1,354,789 - MPMX26_01278 0.55 -4.5
1,354,789 - MPMX26_01278 0.55 -5.2
1,354,789 - MPMX26_01278 0.55 -5.9
1,354,798 - MPMX26_01278 0.56 -4.4
1,354,842 - MPMX26_01278 0.59 -5.2
1,354,853 - MPMX26_01278 0.60 -5.0
1,354,915 - MPMX26_01278 0.64 -6.0
1,354,926 - MPMX26_01278 0.64 -2.9
1,354,948 - MPMX26_01278 0.66 -1.2
1,355,013 - MPMX26_01278 0.70 -4.8
1,355,013 - MPMX26_01278 0.70 -5.1
1,355,013 - MPMX26_01278 0.70 -4.8
1,355,026 - MPMX26_01278 0.71 -4.4
1,355,026 - MPMX26_01278 0.71 -2.8
1,355,044 - MPMX26_01278 0.72 -2.7
1,355,124 - MPMX26_01278 0.77 -3.0
1,355,148 - MPMX26_01278 0.79 -6.0
1,355,226 - MPMX26_01278 0.84 -4.8
1,355,238 - MPMX26_01278 0.85 -5.2
1,355,289 - MPMX26_01278 0.88 -3.5
1,355,290 - MPMX26_01278 0.88 -6.3
1,355,313 - MPMX26_01278 0.89 -6.0
1,355,313 - MPMX26_01278 0.89 -5.8
1,355,313 - MPMX26_01278 0.89 -3.9
1,355,313 - MPMX26_01278 0.89 -3.7
1,355,313 - MPMX26_01278 0.89 -4.7
1,355,313 - MPMX26_01278 0.89 -4.4
1,355,313 - MPMX26_01278 0.89 -4.9
1,355,313 - MPMX26_01278 0.89 -5.7
1,355,313 - MPMX26_01278 0.89 -5.2
1,355,315 - MPMX26_01278 0.90 -1.2
1,355,355 - -3.4
1,355,410 - -3.6
1,355,410 - -4.6
1,355,410 - -6.2
1,356,237 + +0.3
1,356,237 + +0.7
1,356,260 + -0.5
1,356,328 + MPMX26_01280 0.11 -0.2
1,356,351 + MPMX26_01280 0.15 +0.3
1,356,410 + MPMX26_01280 0.23 +0.0
1,356,421 + MPMX26_01280 0.25 +0.9
1,356,421 + MPMX26_01280 0.25 -0.1
1,356,429 + MPMX26_01280 0.26 +0.3
1,356,798 + MPMX26_01280 0.81 -0.2
1,357,036 + -5.2
1,357,042 + -1.0
1,357,043 + -3.5
1,357,045 + -5.8
1,357,052 + -5.8
1,357,067 + -5.8
1,357,083 + -1.4
1,357,091 + -2.3
1,357,091 + -2.7
1,357,091 + -5.3
1,357,091 + -1.2
1,357,091 + -3.3
1,357,091 + -4.5
1,357,091 + -5.6
1,357,091 + -6.1
1,357,091 + -5.8
1,357,103 + -5.1
1,357,103 + -3.3
1,357,103 + -5.0
1,357,103 + -4.5
1,357,103 + -6.0
1,357,134 + MPMX26_01281 0.12 -5.6
1,357,139 + MPMX26_01281 0.12 -4.9
1,357,147 + MPMX26_01281 0.13 -4.5
1,357,147 + MPMX26_01281 0.13 -4.8
1,357,147 + MPMX26_01281 0.13 -4.3
1,357,149 + MPMX26_01281 0.13 -5.5
1,357,149 + MPMX26_01281 0.13 -3.8
1,357,212 + MPMX26_01281 0.19 -2.9
1,357,225 + MPMX26_01281 0.20 -5.3
1,357,245 + MPMX26_01281 0.22 -2.6
1,357,245 + MPMX26_01281 0.22 -4.5
1,357,245 + MPMX26_01281 0.22 -4.1
1,357,245 + MPMX26_01281 0.22 -4.3
1,357,245 + MPMX26_01281 0.22 -4.2

Or see this region's nucleotide sequence