Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01278 and MPMX26_01279 are separated by 105 nucleotides MPMX26_01279 and MPMX26_01280 overlap by 1 nucleotides MPMX26_01280 and MPMX26_01281 are separated by 86 nucleotides
MPMX26_01278: MPMX26_01278 - L-threonine dehydratase biosynthetic IlvA, at 1,353,937 to 1,355,475
_01278
MPMX26_01279: MPMX26_01279 - Ribose-5-phosphate isomerase A, at 1,355,581 to 1,356,252
_01279
MPMX26_01280: MPMX26_01280 - hypothetical protein, at 1,356,252 to 1,356,926
_01280
MPMX26_01281: MPMX26_01281 - N-acetyl-gamma-glutamyl-phosphate reductase, at 1,357,013 to 1,358,062
_01281
Position (kb)
1355
1356
1357 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1354.639 kb on - strand, within MPMX26_01278 at 1354.690 kb on - strand, within MPMX26_01278 at 1354.705 kb on - strand, within MPMX26_01278 at 1354.711 kb on - strand, within MPMX26_01278 at 1354.767 kb on - strand, within MPMX26_01278 at 1354.789 kb on - strand, within MPMX26_01278 at 1354.789 kb on - strand, within MPMX26_01278 at 1354.789 kb on - strand, within MPMX26_01278 at 1354.789 kb on - strand, within MPMX26_01278 at 1354.789 kb on - strand, within MPMX26_01278 at 1354.789 kb on - strand, within MPMX26_01278 at 1354.798 kb on - strand, within MPMX26_01278 at 1354.842 kb on - strand, within MPMX26_01278 at 1354.853 kb on - strand, within MPMX26_01278 at 1354.915 kb on - strand, within MPMX26_01278 at 1354.926 kb on - strand, within MPMX26_01278 at 1354.948 kb on - strand, within MPMX26_01278 at 1355.013 kb on - strand, within MPMX26_01278 at 1355.013 kb on - strand, within MPMX26_01278 at 1355.013 kb on - strand, within MPMX26_01278 at 1355.026 kb on - strand, within MPMX26_01278 at 1355.026 kb on - strand, within MPMX26_01278 at 1355.044 kb on - strand, within MPMX26_01278 at 1355.124 kb on - strand, within MPMX26_01278 at 1355.148 kb on - strand, within MPMX26_01278 at 1355.226 kb on - strand, within MPMX26_01278 at 1355.238 kb on - strand, within MPMX26_01278 at 1355.289 kb on - strand, within MPMX26_01278 at 1355.290 kb on - strand, within MPMX26_01278 at 1355.313 kb on - strand, within MPMX26_01278 at 1355.313 kb on - strand, within MPMX26_01278 at 1355.313 kb on - strand, within MPMX26_01278 at 1355.313 kb on - strand, within MPMX26_01278 at 1355.313 kb on - strand, within MPMX26_01278 at 1355.313 kb on - strand, within MPMX26_01278 at 1355.313 kb on - strand, within MPMX26_01278 at 1355.313 kb on - strand, within MPMX26_01278 at 1355.313 kb on - strand, within MPMX26_01278 at 1355.315 kb on - strand, within MPMX26_01278 at 1355.355 kb on - strand at 1355.410 kb on - strand at 1355.410 kb on - strand at 1355.410 kb on - strand at 1356.237 kb on + strand at 1356.237 kb on + strand at 1356.260 kb on + strand at 1356.328 kb on + strand, within MPMX26_01280 at 1356.351 kb on + strand, within MPMX26_01280 at 1356.410 kb on + strand, within MPMX26_01280 at 1356.421 kb on + strand, within MPMX26_01280 at 1356.421 kb on + strand, within MPMX26_01280 at 1356.429 kb on + strand, within MPMX26_01280 at 1356.798 kb on + strand, within MPMX26_01280 at 1357.036 kb on + strand at 1357.042 kb on + strand at 1357.043 kb on + strand at 1357.045 kb on + strand at 1357.052 kb on + strand at 1357.067 kb on + strand at 1357.083 kb on + strand at 1357.091 kb on + strand at 1357.091 kb on + strand at 1357.091 kb on + strand at 1357.091 kb on + strand at 1357.091 kb on + strand at 1357.091 kb on + strand at 1357.091 kb on + strand at 1357.091 kb on + strand at 1357.091 kb on + strand at 1357.103 kb on + strand at 1357.103 kb on + strand at 1357.103 kb on + strand at 1357.103 kb on + strand at 1357.103 kb on + strand at 1357.134 kb on + strand, within MPMX26_01281 at 1357.139 kb on + strand, within MPMX26_01281 at 1357.147 kb on + strand, within MPMX26_01281 at 1357.147 kb on + strand, within MPMX26_01281 at 1357.147 kb on + strand, within MPMX26_01281 at 1357.149 kb on + strand, within MPMX26_01281 at 1357.149 kb on + strand, within MPMX26_01281 at 1357.212 kb on + strand, within MPMX26_01281 at 1357.225 kb on + strand, within MPMX26_01281 at 1357.245 kb on + strand, within MPMX26_01281 at 1357.245 kb on + strand, within MPMX26_01281 at 1357.245 kb on + strand, within MPMX26_01281 at 1357.245 kb on + strand, within MPMX26_01281 at 1357.245 kb on + strand, within MPMX26_01281
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 1,354,639 - MPMX26_01278 0.46 -5.4 1,354,690 - MPMX26_01278 0.49 -6.2 1,354,705 - MPMX26_01278 0.50 -3.2 1,354,711 - MPMX26_01278 0.50 -3.7 1,354,767 - MPMX26_01278 0.54 -5.3 1,354,789 - MPMX26_01278 0.55 -4.2 1,354,789 - MPMX26_01278 0.55 -5.2 1,354,789 - MPMX26_01278 0.55 -5.9 1,354,789 - MPMX26_01278 0.55 -4.5 1,354,789 - MPMX26_01278 0.55 -5.2 1,354,789 - MPMX26_01278 0.55 -5.9 1,354,798 - MPMX26_01278 0.56 -4.4 1,354,842 - MPMX26_01278 0.59 -5.2 1,354,853 - MPMX26_01278 0.60 -5.0 1,354,915 - MPMX26_01278 0.64 -6.0 1,354,926 - MPMX26_01278 0.64 -2.9 1,354,948 - MPMX26_01278 0.66 -1.2 1,355,013 - MPMX26_01278 0.70 -4.8 1,355,013 - MPMX26_01278 0.70 -5.1 1,355,013 - MPMX26_01278 0.70 -4.8 1,355,026 - MPMX26_01278 0.71 -4.4 1,355,026 - MPMX26_01278 0.71 -2.8 1,355,044 - MPMX26_01278 0.72 -2.7 1,355,124 - MPMX26_01278 0.77 -3.0 1,355,148 - MPMX26_01278 0.79 -6.0 1,355,226 - MPMX26_01278 0.84 -4.8 1,355,238 - MPMX26_01278 0.85 -5.2 1,355,289 - MPMX26_01278 0.88 -3.5 1,355,290 - MPMX26_01278 0.88 -6.3 1,355,313 - MPMX26_01278 0.89 -6.0 1,355,313 - MPMX26_01278 0.89 -5.8 1,355,313 - MPMX26_01278 0.89 -3.9 1,355,313 - MPMX26_01278 0.89 -3.7 1,355,313 - MPMX26_01278 0.89 -4.7 1,355,313 - MPMX26_01278 0.89 -4.4 1,355,313 - MPMX26_01278 0.89 -4.9 1,355,313 - MPMX26_01278 0.89 -5.7 1,355,313 - MPMX26_01278 0.89 -5.2 1,355,315 - MPMX26_01278 0.90 -1.2 1,355,355 - -3.4 1,355,410 - -3.6 1,355,410 - -4.6 1,355,410 - -6.2 1,356,237 + +0.3 1,356,237 + +0.7 1,356,260 + -0.5 1,356,328 + MPMX26_01280 0.11 -0.2 1,356,351 + MPMX26_01280 0.15 +0.3 1,356,410 + MPMX26_01280 0.23 +0.0 1,356,421 + MPMX26_01280 0.25 +0.9 1,356,421 + MPMX26_01280 0.25 -0.1 1,356,429 + MPMX26_01280 0.26 +0.3 1,356,798 + MPMX26_01280 0.81 -0.2 1,357,036 + -5.2 1,357,042 + -1.0 1,357,043 + -3.5 1,357,045 + -5.8 1,357,052 + -5.8 1,357,067 + -5.8 1,357,083 + -1.4 1,357,091 + -2.3 1,357,091 + -2.7 1,357,091 + -5.3 1,357,091 + -1.2 1,357,091 + -3.3 1,357,091 + -4.5 1,357,091 + -5.6 1,357,091 + -6.1 1,357,091 + -5.8 1,357,103 + -5.1 1,357,103 + -3.3 1,357,103 + -5.0 1,357,103 + -4.5 1,357,103 + -6.0 1,357,134 + MPMX26_01281 0.12 -5.6 1,357,139 + MPMX26_01281 0.12 -4.9 1,357,147 + MPMX26_01281 0.13 -4.5 1,357,147 + MPMX26_01281 0.13 -4.8 1,357,147 + MPMX26_01281 0.13 -4.3 1,357,149 + MPMX26_01281 0.13 -5.5 1,357,149 + MPMX26_01281 0.13 -3.8 1,357,212 + MPMX26_01281 0.19 -2.9 1,357,225 + MPMX26_01281 0.20 -5.3 1,357,245 + MPMX26_01281 0.22 -2.6 1,357,245 + MPMX26_01281 0.22 -4.5 1,357,245 + MPMX26_01281 0.22 -4.1 1,357,245 + MPMX26_01281 0.22 -4.3 1,357,245 + MPMX26_01281 0.22 -4.2
Or see this region's nucleotide sequence