Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01161

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01158 and MPMX26_01159 are separated by 10 nucleotidesMPMX26_01159 and MPMX26_01160 overlap by 1 nucleotidesMPMX26_01160 and MPMX26_01161 are separated by 4 nucleotidesMPMX26_01161 and MPMX26_01162 are separated by 3 nucleotides MPMX26_01158: MPMX26_01158 - Protoheme IX farnesyltransferase, at 1,224,697 to 1,225,575 _01158 MPMX26_01159: MPMX26_01159 - Cytochrome bo(3) ubiquinol oxidase subunit 4, at 1,225,586 to 1,225,912 _01159 MPMX26_01160: MPMX26_01160 - Cytochrome bo(3) ubiquinol oxidase subunit 3, at 1,225,912 to 1,226,532 _01160 MPMX26_01161: MPMX26_01161 - Cytochrome bo(3) ubiquinol oxidase subunit 1, at 1,226,537 to 1,228,519 _01161 MPMX26_01162: MPMX26_01162 - Cytochrome bo(3) ubiquinol oxidase subunit 2, at 1,228,523 to 1,229,590 _01162 Position (kb) 1226 1227 1228 1229Strain fitness (log2 ratio) -3 -2 -1 0 1at 1225.584 kb on + strandat 1225.584 kb on + strandat 1225.584 kb on + strandat 1225.592 kb on - strandat 1225.592 kb on - strandat 1225.652 kb on + strand, within MPMX26_01159at 1225.657 kb on + strand, within MPMX26_01159at 1225.660 kb on - strand, within MPMX26_01159at 1225.660 kb on - strand, within MPMX26_01159at 1225.660 kb on - strand, within MPMX26_01159at 1225.660 kb on - strand, within MPMX26_01159at 1225.701 kb on - strand, within MPMX26_01159at 1225.701 kb on - strand, within MPMX26_01159at 1225.734 kb on + strand, within MPMX26_01159at 1225.800 kb on + strand, within MPMX26_01159at 1225.831 kb on + strand, within MPMX26_01159at 1225.843 kb on + strand, within MPMX26_01159at 1225.843 kb on + strand, within MPMX26_01159at 1225.851 kb on - strand, within MPMX26_01159at 1225.851 kb on - strand, within MPMX26_01159at 1225.851 kb on - strand, within MPMX26_01159at 1225.851 kb on - strand, within MPMX26_01159at 1225.918 kb on - strandat 1225.959 kb on - strandat 1225.959 kb on - strandat 1225.961 kb on + strandat 1226.093 kb on + strand, within MPMX26_01160at 1226.093 kb on + strand, within MPMX26_01160at 1226.093 kb on + strand, within MPMX26_01160at 1226.101 kb on - strand, within MPMX26_01160at 1226.101 kb on - strand, within MPMX26_01160at 1226.111 kb on - strand, within MPMX26_01160at 1226.194 kb on - strand, within MPMX26_01160at 1226.293 kb on + strand, within MPMX26_01160at 1226.349 kb on + strand, within MPMX26_01160at 1226.381 kb on + strand, within MPMX26_01160at 1226.383 kb on + strand, within MPMX26_01160at 1226.391 kb on - strand, within MPMX26_01160at 1226.391 kb on - strand, within MPMX26_01160at 1226.391 kb on - strand, within MPMX26_01160at 1226.391 kb on - strand, within MPMX26_01160at 1226.536 kb on - strandat 1226.536 kb on - strandat 1226.543 kb on - strandat 1226.616 kb on - strandat 1226.651 kb on + strandat 1226.670 kb on + strandat 1226.702 kb on + strandat 1226.705 kb on - strandat 1226.714 kb on + strandat 1226.714 kb on + strandat 1226.722 kb on - strandat 1226.722 kb on - strandat 1226.724 kb on + strandat 1226.826 kb on + strand, within MPMX26_01161at 1226.852 kb on - strand, within MPMX26_01161at 1226.892 kb on + strand, within MPMX26_01161at 1226.892 kb on + strand, within MPMX26_01161at 1226.900 kb on - strand, within MPMX26_01161at 1226.900 kb on - strand, within MPMX26_01161at 1226.927 kb on - strand, within MPMX26_01161at 1226.927 kb on - strand, within MPMX26_01161at 1227.018 kb on + strand, within MPMX26_01161at 1227.021 kb on - strand, within MPMX26_01161at 1227.026 kb on - strand, within MPMX26_01161at 1227.071 kb on - strand, within MPMX26_01161at 1227.167 kb on - strand, within MPMX26_01161at 1227.181 kb on + strand, within MPMX26_01161at 1227.331 kb on - strand, within MPMX26_01161at 1227.331 kb on - strand, within MPMX26_01161at 1227.373 kb on - strand, within MPMX26_01161at 1227.380 kb on - strand, within MPMX26_01161at 1227.385 kb on + strand, within MPMX26_01161at 1227.509 kb on - strand, within MPMX26_01161at 1227.529 kb on + strand, within MPMX26_01161at 1227.535 kb on + strand, within MPMX26_01161at 1227.545 kb on - strand, within MPMX26_01161at 1227.598 kb on - strand, within MPMX26_01161at 1227.664 kb on - strand, within MPMX26_01161at 1227.774 kb on - strand, within MPMX26_01161at 1227.790 kb on - strand, within MPMX26_01161at 1227.791 kb on + strand, within MPMX26_01161at 1227.811 kb on + strand, within MPMX26_01161at 1227.814 kb on - strand, within MPMX26_01161at 1227.816 kb on + strand, within MPMX26_01161at 1227.816 kb on + strand, within MPMX26_01161at 1227.824 kb on - strand, within MPMX26_01161at 1227.829 kb on - strand, within MPMX26_01161at 1227.834 kb on - strand, within MPMX26_01161at 1227.870 kb on + strand, within MPMX26_01161at 1227.909 kb on + strand, within MPMX26_01161at 1228.002 kb on + strand, within MPMX26_01161at 1228.010 kb on - strand, within MPMX26_01161at 1228.018 kb on - strand, within MPMX26_01161at 1228.095 kb on + strand, within MPMX26_01161at 1228.095 kb on + strand, within MPMX26_01161at 1228.103 kb on - strand, within MPMX26_01161at 1228.105 kb on - strand, within MPMX26_01161at 1228.179 kb on - strand, within MPMX26_01161at 1228.242 kb on + strand, within MPMX26_01161at 1228.249 kb on - strand, within MPMX26_01161at 1228.268 kb on - strand, within MPMX26_01161at 1228.276 kb on + strand, within MPMX26_01161at 1228.284 kb on - strand, within MPMX26_01161at 1228.313 kb on - strand, within MPMX26_01161at 1228.366 kb on + strandat 1228.374 kb on - strandat 1228.374 kb on - strandat 1228.442 kb on + strandat 1228.442 kb on + strandat 1228.461 kb on + strandat 1228.469 kb on - strandat 1228.474 kb on + strandat 1228.484 kb on + strandat 1228.484 kb on + strandat 1228.588 kb on - strandat 1228.597 kb on - strandat 1228.597 kb on - strandat 1228.603 kb on + strandat 1228.607 kb on - strandat 1228.611 kb on - strandat 1228.611 kb on - strandat 1228.611 kb on - strandat 1228.611 kb on - strandat 1228.611 kb on - strandat 1228.710 kb on - strand, within MPMX26_01162at 1228.884 kb on - strand, within MPMX26_01162at 1228.955 kb on + strand, within MPMX26_01162at 1228.963 kb on - strand, within MPMX26_01162at 1228.970 kb on - strand, within MPMX26_01162at 1229.043 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.048 kb on + strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.056 kb on - strand, within MPMX26_01162at 1229.159 kb on + strand, within MPMX26_01162at 1229.192 kb on - strand, within MPMX26_01162at 1229.192 kb on - strand, within MPMX26_01162at 1229.192 kb on - strand, within MPMX26_01162at 1229.204 kb on + strand, within MPMX26_01162at 1229.236 kb on + strand, within MPMX26_01162at 1229.250 kb on + strand, within MPMX26_01162at 1229.251 kb on + strand, within MPMX26_01162at 1229.251 kb on + strand, within MPMX26_01162at 1229.259 kb on - strand, within MPMX26_01162at 1229.285 kb on + strand, within MPMX26_01162at 1229.324 kb on - strand, within MPMX26_01162at 1229.358 kb on + strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.366 kb on - strand, within MPMX26_01162at 1229.405 kb on + strand, within MPMX26_01162at 1229.482 kb on - strand, within MPMX26_01162

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,225,584 + -0.7
1,225,584 + -0.2
1,225,584 + -2.0
1,225,592 - +1.2
1,225,592 - +0.8
1,225,652 + MPMX26_01159 0.20 -1.2
1,225,657 + MPMX26_01159 0.22 -0.4
1,225,660 - MPMX26_01159 0.23 +1.6
1,225,660 - MPMX26_01159 0.23 -2.2
1,225,660 - MPMX26_01159 0.23 -0.0
1,225,660 - MPMX26_01159 0.23 -1.9
1,225,701 - MPMX26_01159 0.35 -0.4
1,225,701 - MPMX26_01159 0.35 -1.9
1,225,734 + MPMX26_01159 0.45 +0.6
1,225,800 + MPMX26_01159 0.65 -0.7
1,225,831 + MPMX26_01159 0.75 -0.7
1,225,843 + MPMX26_01159 0.79 -1.0
1,225,843 + MPMX26_01159 0.79 -1.0
1,225,851 - MPMX26_01159 0.81 -0.0
1,225,851 - MPMX26_01159 0.81 -1.0
1,225,851 - MPMX26_01159 0.81 -2.9
1,225,851 - MPMX26_01159 0.81 +0.6
1,225,918 - -0.7
1,225,959 - -1.4
1,225,959 - -0.7
1,225,961 + -0.7
1,226,093 + MPMX26_01160 0.29 -1.0
1,226,093 + MPMX26_01160 0.29 -0.7
1,226,093 + MPMX26_01160 0.29 -1.2
1,226,101 - MPMX26_01160 0.30 -1.4
1,226,101 - MPMX26_01160 0.30 -0.2
1,226,111 - MPMX26_01160 0.32 +0.6
1,226,194 - MPMX26_01160 0.45 -0.6
1,226,293 + MPMX26_01160 0.61 -1.0
1,226,349 + MPMX26_01160 0.70 +0.3
1,226,381 + MPMX26_01160 0.76 +0.6
1,226,383 + MPMX26_01160 0.76 -1.7
1,226,391 - MPMX26_01160 0.77 -0.4
1,226,391 - MPMX26_01160 0.77 -1.9
1,226,391 - MPMX26_01160 0.77 +0.2
1,226,391 - MPMX26_01160 0.77 -0.7
1,226,536 - -0.4
1,226,536 - -1.2
1,226,543 - -0.4
1,226,616 - -0.4
1,226,651 + -1.2
1,226,670 + -1.0
1,226,702 + -0.7
1,226,705 - +0.6
1,226,714 + -1.4
1,226,714 + -0.4
1,226,722 - -0.0
1,226,722 - +1.6
1,226,724 + -1.1
1,226,826 + MPMX26_01161 0.15 -1.2
1,226,852 - MPMX26_01161 0.16 -0.4
1,226,892 + MPMX26_01161 0.18 -2.2
1,226,892 + MPMX26_01161 0.18 -0.7
1,226,900 - MPMX26_01161 0.18 -1.2
1,226,900 - MPMX26_01161 0.18 -1.0
1,226,927 - MPMX26_01161 0.20 -1.6
1,226,927 - MPMX26_01161 0.20 +0.6
1,227,018 + MPMX26_01161 0.24 +0.6
1,227,021 - MPMX26_01161 0.24 -1.6
1,227,026 - MPMX26_01161 0.25 -1.0
1,227,071 - MPMX26_01161 0.27 -0.7
1,227,167 - MPMX26_01161 0.32 -0.4
1,227,181 + MPMX26_01161 0.32 -0.0
1,227,331 - MPMX26_01161 0.40 -1.0
1,227,331 - MPMX26_01161 0.40 -1.0
1,227,373 - MPMX26_01161 0.42 -1.6
1,227,380 - MPMX26_01161 0.43 -0.4
1,227,385 + MPMX26_01161 0.43 -0.7
1,227,509 - MPMX26_01161 0.49 -0.4
1,227,529 + MPMX26_01161 0.50 +0.6
1,227,535 + MPMX26_01161 0.50 +0.6
1,227,545 - MPMX26_01161 0.51 -1.6
1,227,598 - MPMX26_01161 0.54 -0.7
1,227,664 - MPMX26_01161 0.57 +1.2
1,227,774 - MPMX26_01161 0.62 +0.6
1,227,790 - MPMX26_01161 0.63 -0.0
1,227,791 + MPMX26_01161 0.63 -0.4
1,227,811 + MPMX26_01161 0.64 -0.7
1,227,814 - MPMX26_01161 0.64 -1.0
1,227,816 + MPMX26_01161 0.64 -0.7
1,227,816 + MPMX26_01161 0.64 -2.2
1,227,824 - MPMX26_01161 0.65 -0.4
1,227,829 - MPMX26_01161 0.65 -1.4
1,227,834 - MPMX26_01161 0.65 +0.6
1,227,870 + MPMX26_01161 0.67 +0.6
1,227,909 + MPMX26_01161 0.69 -1.6
1,228,002 + MPMX26_01161 0.74 -0.0
1,228,010 - MPMX26_01161 0.74 -0.0
1,228,018 - MPMX26_01161 0.75 -0.0
1,228,095 + MPMX26_01161 0.79 -0.4
1,228,095 + MPMX26_01161 0.79 -0.4
1,228,103 - MPMX26_01161 0.79 -2.6
1,228,105 - MPMX26_01161 0.79 -0.0
1,228,179 - MPMX26_01161 0.83 -1.2
1,228,242 + MPMX26_01161 0.86 -0.4
1,228,249 - MPMX26_01161 0.86 -1.2
1,228,268 - MPMX26_01161 0.87 -0.7
1,228,276 + MPMX26_01161 0.88 -0.7
1,228,284 - MPMX26_01161 0.88 -0.0
1,228,313 - MPMX26_01161 0.90 -1.0
1,228,366 + -1.4
1,228,374 - -1.4
1,228,374 - -0.0
1,228,442 + -1.0
1,228,442 + -1.0
1,228,461 + -0.7
1,228,469 - -0.4
1,228,474 + -1.4
1,228,484 + +1.0
1,228,484 + -0.4
1,228,588 - +0.6
1,228,597 - -0.0
1,228,597 - -2.0
1,228,603 + -0.4
1,228,607 - -1.2
1,228,611 - -1.2
1,228,611 - -0.4
1,228,611 - -1.0
1,228,611 - +0.6
1,228,611 - +1.0
1,228,710 - MPMX26_01162 0.18 -1.2
1,228,884 - MPMX26_01162 0.34 -0.4
1,228,955 + MPMX26_01162 0.40 -1.2
1,228,963 - MPMX26_01162 0.41 +1.6
1,228,970 - MPMX26_01162 0.42 -0.7
1,229,043 + MPMX26_01162 0.49 -0.7
1,229,048 + MPMX26_01162 0.49 -0.4
1,229,048 + MPMX26_01162 0.49 -0.0
1,229,048 + MPMX26_01162 0.49 -0.0
1,229,048 + MPMX26_01162 0.49 -0.4
1,229,056 - MPMX26_01162 0.50 -0.4
1,229,056 - MPMX26_01162 0.50 -0.4
1,229,056 - MPMX26_01162 0.50 -0.7
1,229,056 - MPMX26_01162 0.50 -0.7
1,229,056 - MPMX26_01162 0.50 -0.4
1,229,159 + MPMX26_01162 0.60 -1.4
1,229,192 - MPMX26_01162 0.63 -0.7
1,229,192 - MPMX26_01162 0.63 -0.4
1,229,192 - MPMX26_01162 0.63 -0.0
1,229,204 + MPMX26_01162 0.64 -0.0
1,229,236 + MPMX26_01162 0.67 +1.6
1,229,250 + MPMX26_01162 0.68 +0.6
1,229,251 + MPMX26_01162 0.68 -1.8
1,229,251 + MPMX26_01162 0.68 -0.7
1,229,259 - MPMX26_01162 0.69 +0.6
1,229,285 + MPMX26_01162 0.71 -0.0
1,229,324 - MPMX26_01162 0.75 -0.0
1,229,358 + MPMX26_01162 0.78 -0.4
1,229,366 - MPMX26_01162 0.79 -0.7
1,229,366 - MPMX26_01162 0.79 -1.0
1,229,366 - MPMX26_01162 0.79 -1.9
1,229,366 - MPMX26_01162 0.79 -0.4
1,229,366 - MPMX26_01162 0.79 -0.7
1,229,405 + MPMX26_01162 0.83 -1.0
1,229,482 - MPMX26_01162 0.90 -0.7

Or see this region's nucleotide sequence