Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01123

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01122 and MPMX26_01123 are separated by 80 nucleotidesMPMX26_01123 and MPMX26_01124 are separated by 131 nucleotidesMPMX26_01124 and MPMX26_01125 are separated by 21 nucleotides MPMX26_01122: MPMX26_01122 - Amidophosphoribosyltransferase, at 1,190,350 to 1,191,888 _01122 MPMX26_01123: MPMX26_01123 - Protease HtpX, at 1,191,969 to 1,193,858 _01123 MPMX26_01124: MPMX26_01124 - hypothetical protein, at 1,193,990 to 1,194,664 _01124 MPMX26_01125: MPMX26_01125 - Glyoxylate/hydroxypyruvate reductase B, at 1,194,686 to 1,195,657 _01125 Position (kb) 1191 1192 1193 1194Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 1191.014 kb on + strand, within MPMX26_01122at 1191.014 kb on + strand, within MPMX26_01122at 1191.014 kb on + strand, within MPMX26_01122at 1191.014 kb on + strand, within MPMX26_01122at 1191.044 kb on + strand, within MPMX26_01122at 1191.057 kb on + strand, within MPMX26_01122at 1191.137 kb on + strand, within MPMX26_01122at 1191.159 kb on + strand, within MPMX26_01122at 1191.253 kb on + strand, within MPMX26_01122at 1191.261 kb on + strand, within MPMX26_01122at 1191.274 kb on + strand, within MPMX26_01122at 1191.301 kb on + strand, within MPMX26_01122at 1191.352 kb on + strand, within MPMX26_01122at 1191.361 kb on + strand, within MPMX26_01122at 1191.442 kb on + strand, within MPMX26_01122at 1191.464 kb on + strand, within MPMX26_01122at 1191.464 kb on + strand, within MPMX26_01122at 1191.531 kb on + strand, within MPMX26_01122at 1191.584 kb on + strand, within MPMX26_01122at 1191.594 kb on + strand, within MPMX26_01122at 1191.672 kb on + strand, within MPMX26_01122at 1191.672 kb on + strand, within MPMX26_01122at 1191.685 kb on + strand, within MPMX26_01122at 1191.730 kb on + strand, within MPMX26_01122at 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.740 kb on + strandat 1191.754 kb on + strandat 1191.862 kb on + strandat 1193.562 kb on - strand, within MPMX26_01123at 1194.722 kb on + strandat 1194.803 kb on + strand, within MPMX26_01125at 1194.856 kb on + strand, within MPMX26_01125at 1194.856 kb on + strand, within MPMX26_01125

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,191,014 + MPMX26_01122 0.43 -4.5
1,191,014 + MPMX26_01122 0.43 -3.9
1,191,014 + MPMX26_01122 0.43 -4.2
1,191,014 + MPMX26_01122 0.43 -4.5
1,191,044 + MPMX26_01122 0.45 -4.2
1,191,057 + MPMX26_01122 0.46 -4.2
1,191,137 + MPMX26_01122 0.51 -4.7
1,191,159 + MPMX26_01122 0.53 -4.7
1,191,253 + MPMX26_01122 0.59 -3.8
1,191,261 + MPMX26_01122 0.59 -1.6
1,191,274 + MPMX26_01122 0.60 -4.1
1,191,301 + MPMX26_01122 0.62 -3.7
1,191,352 + MPMX26_01122 0.65 -4.8
1,191,361 + MPMX26_01122 0.66 -3.8
1,191,442 + MPMX26_01122 0.71 -3.0
1,191,464 + MPMX26_01122 0.72 -3.9
1,191,464 + MPMX26_01122 0.72 -4.4
1,191,531 + MPMX26_01122 0.77 -3.7
1,191,584 + MPMX26_01122 0.80 -2.4
1,191,594 + MPMX26_01122 0.81 -4.5
1,191,672 + MPMX26_01122 0.86 -5.0
1,191,672 + MPMX26_01122 0.86 -5.1
1,191,685 + MPMX26_01122 0.87 -1.7
1,191,730 + MPMX26_01122 0.90 -5.8
1,191,740 + -4.1
1,191,740 + -3.7
1,191,740 + -3.9
1,191,740 + -4.8
1,191,740 + -4.1
1,191,740 + -4.1
1,191,754 + -2.1
1,191,862 + -2.8
1,193,562 - MPMX26_01123 0.84 -4.4
1,194,722 + -2.0
1,194,803 + MPMX26_01125 0.12 +0.3
1,194,856 + MPMX26_01125 0.17 -0.7
1,194,856 + MPMX26_01125 0.17 +1.2

Or see this region's nucleotide sequence