Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01122 and MPMX26_01123 are separated by 80 nucleotides MPMX26_01123 and MPMX26_01124 are separated by 131 nucleotides MPMX26_01124 and MPMX26_01125 are separated by 21 nucleotides
MPMX26_01122: MPMX26_01122 - Amidophosphoribosyltransferase, at 1,190,350 to 1,191,888
_01122
MPMX26_01123: MPMX26_01123 - Protease HtpX, at 1,191,969 to 1,193,858
_01123
MPMX26_01124: MPMX26_01124 - hypothetical protein, at 1,193,990 to 1,194,664
_01124
MPMX26_01125: MPMX26_01125 - Glyoxylate/hydroxypyruvate reductase B, at 1,194,686 to 1,195,657
_01125
Position (kb)
1191
1192
1193
1194 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1191.014 kb on + strand, within MPMX26_01122 at 1191.014 kb on + strand, within MPMX26_01122 at 1191.014 kb on + strand, within MPMX26_01122 at 1191.014 kb on + strand, within MPMX26_01122 at 1191.044 kb on + strand, within MPMX26_01122 at 1191.057 kb on + strand, within MPMX26_01122 at 1191.137 kb on + strand, within MPMX26_01122 at 1191.159 kb on + strand, within MPMX26_01122 at 1191.253 kb on + strand, within MPMX26_01122 at 1191.261 kb on + strand, within MPMX26_01122 at 1191.274 kb on + strand, within MPMX26_01122 at 1191.301 kb on + strand, within MPMX26_01122 at 1191.352 kb on + strand, within MPMX26_01122 at 1191.361 kb on + strand, within MPMX26_01122 at 1191.442 kb on + strand, within MPMX26_01122 at 1191.464 kb on + strand, within MPMX26_01122 at 1191.464 kb on + strand, within MPMX26_01122 at 1191.531 kb on + strand, within MPMX26_01122 at 1191.584 kb on + strand, within MPMX26_01122 at 1191.594 kb on + strand, within MPMX26_01122 at 1191.672 kb on + strand, within MPMX26_01122 at 1191.672 kb on + strand, within MPMX26_01122 at 1191.685 kb on + strand, within MPMX26_01122 at 1191.730 kb on + strand, within MPMX26_01122 at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.740 kb on + strand at 1191.754 kb on + strand at 1191.862 kb on + strand at 1193.562 kb on - strand, within MPMX26_01123 at 1194.722 kb on + strand at 1194.803 kb on + strand, within MPMX26_01125 at 1194.856 kb on + strand, within MPMX26_01125 at 1194.856 kb on + strand, within MPMX26_01125
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 1,191,014 + MPMX26_01122 0.43 -4.5 1,191,014 + MPMX26_01122 0.43 -3.9 1,191,014 + MPMX26_01122 0.43 -4.2 1,191,014 + MPMX26_01122 0.43 -4.5 1,191,044 + MPMX26_01122 0.45 -4.2 1,191,057 + MPMX26_01122 0.46 -4.2 1,191,137 + MPMX26_01122 0.51 -4.7 1,191,159 + MPMX26_01122 0.53 -4.7 1,191,253 + MPMX26_01122 0.59 -3.8 1,191,261 + MPMX26_01122 0.59 -1.6 1,191,274 + MPMX26_01122 0.60 -4.1 1,191,301 + MPMX26_01122 0.62 -3.7 1,191,352 + MPMX26_01122 0.65 -4.8 1,191,361 + MPMX26_01122 0.66 -3.8 1,191,442 + MPMX26_01122 0.71 -3.0 1,191,464 + MPMX26_01122 0.72 -3.9 1,191,464 + MPMX26_01122 0.72 -4.4 1,191,531 + MPMX26_01122 0.77 -3.7 1,191,584 + MPMX26_01122 0.80 -2.4 1,191,594 + MPMX26_01122 0.81 -4.5 1,191,672 + MPMX26_01122 0.86 -5.0 1,191,672 + MPMX26_01122 0.86 -5.1 1,191,685 + MPMX26_01122 0.87 -1.7 1,191,730 + MPMX26_01122 0.90 -5.8 1,191,740 + -4.1 1,191,740 + -3.7 1,191,740 + -3.9 1,191,740 + -4.8 1,191,740 + -4.1 1,191,740 + -4.1 1,191,754 + -2.1 1,191,862 + -2.8 1,193,562 - MPMX26_01123 0.84 -4.4 1,194,722 + -2.0 1,194,803 + MPMX26_01125 0.12 +0.3 1,194,856 + MPMX26_01125 0.17 -0.7 1,194,856 + MPMX26_01125 0.17 +1.2
Or see this region's nucleotide sequence