Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01120

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01118 and MPMX26_01119 overlap by 1 nucleotidesMPMX26_01119 and MPMX26_01120 are separated by 90 nucleotidesMPMX26_01120 and MPMX26_01121 are separated by 3 nucleotidesMPMX26_01121 and MPMX26_01122 are separated by 24 nucleotides MPMX26_01118: MPMX26_01118 - hypothetical protein, at 1,187,018 to 1,188,160 _01118 MPMX26_01119: MPMX26_01119 - hypothetical protein, at 1,188,160 to 1,188,639 _01119 MPMX26_01120: MPMX26_01120 - Dihydroorotate dehydrogenase (quinone), at 1,188,730 to 1,189,734 _01120 MPMX26_01121: MPMX26_01121 - hypothetical protein, at 1,189,738 to 1,190,325 _01121 MPMX26_01122: MPMX26_01122 - Amidophosphoribosyltransferase, at 1,190,350 to 1,191,888 _01122 Position (kb) 1188 1189 1190Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 1187.774 kb on + strand, within MPMX26_01118at 1187.774 kb on + strand, within MPMX26_01118at 1187.774 kb on + strand, within MPMX26_01118at 1187.774 kb on + strand, within MPMX26_01118at 1187.774 kb on + strand, within MPMX26_01118at 1187.779 kb on + strand, within MPMX26_01118at 1187.914 kb on + strand, within MPMX26_01118at 1187.929 kb on + strand, within MPMX26_01118at 1187.965 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.002 kb on + strand, within MPMX26_01118at 1188.118 kb on + strandat 1188.118 kb on + strandat 1188.118 kb on + strandat 1188.131 kb on + strandat 1188.210 kb on + strand, within MPMX26_01119at 1188.282 kb on + strand, within MPMX26_01119at 1188.282 kb on + strand, within MPMX26_01119at 1188.282 kb on + strand, within MPMX26_01119at 1188.282 kb on + strand, within MPMX26_01119at 1188.289 kb on + strand, within MPMX26_01119at 1188.303 kb on + strand, within MPMX26_01119at 1188.304 kb on + strand, within MPMX26_01119at 1188.304 kb on + strand, within MPMX26_01119at 1188.304 kb on + strand, within MPMX26_01119at 1188.304 kb on + strand, within MPMX26_01119at 1188.304 kb on + strand, within MPMX26_01119at 1188.304 kb on + strand, within MPMX26_01119at 1188.376 kb on + strand, within MPMX26_01119at 1188.381 kb on + strand, within MPMX26_01119at 1188.386 kb on + strand, within MPMX26_01119at 1188.457 kb on + strand, within MPMX26_01119at 1188.457 kb on + strand, within MPMX26_01119at 1188.478 kb on + strand, within MPMX26_01119at 1188.478 kb on + strand, within MPMX26_01119at 1188.478 kb on + strand, within MPMX26_01119at 1188.522 kb on + strand, within MPMX26_01119at 1188.532 kb on + strand, within MPMX26_01119at 1188.532 kb on + strand, within MPMX26_01119at 1188.543 kb on + strand, within MPMX26_01119at 1188.549 kb on + strand, within MPMX26_01119at 1188.621 kb on + strandat 1188.732 kb on + strandat 1188.732 kb on + strandat 1188.732 kb on + strandat 1188.732 kb on + strandat 1188.732 kb on + strandat 1188.837 kb on + strand, within MPMX26_01120at 1188.856 kb on + strand, within MPMX26_01120at 1188.856 kb on + strand, within MPMX26_01120at 1188.907 kb on + strand, within MPMX26_01120at 1189.035 kb on + strand, within MPMX26_01120at 1189.046 kb on + strand, within MPMX26_01120at 1189.071 kb on + strand, within MPMX26_01120at 1189.174 kb on + strand, within MPMX26_01120at 1189.182 kb on + strand, within MPMX26_01120at 1189.323 kb on + strand, within MPMX26_01120at 1189.446 kb on + strand, within MPMX26_01120at 1189.462 kb on + strand, within MPMX26_01120at 1189.462 kb on + strand, within MPMX26_01120at 1189.485 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.486 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.496 kb on + strand, within MPMX26_01120at 1189.501 kb on + strand, within MPMX26_01120at 1189.501 kb on + strand, within MPMX26_01120at 1189.508 kb on + strand, within MPMX26_01120at 1189.513 kb on + strand, within MPMX26_01120at 1189.591 kb on + strand, within MPMX26_01120at 1189.596 kb on + strand, within MPMX26_01120at 1189.596 kb on + strand, within MPMX26_01120at 1189.596 kb on + strand, within MPMX26_01120at 1189.596 kb on + strand, within MPMX26_01120at 1189.642 kb on + strandat 1189.668 kb on + strandat 1189.668 kb on + strandat 1189.668 kb on + strandat 1189.668 kb on + strandat 1189.668 kb on + strandat 1189.678 kb on + strandat 1189.678 kb on + strandat 1189.683 kb on + strandat 1189.683 kb on + strandat 1189.683 kb on + strandat 1189.715 kb on + strandat 1189.715 kb on + strandat 1189.773 kb on + strandat 1189.773 kb on + strandat 1189.776 kb on + strandat 1189.783 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.785 kb on + strandat 1189.894 kb on + strand, within MPMX26_01121at 1189.894 kb on + strand, within MPMX26_01121at 1189.894 kb on + strand, within MPMX26_01121at 1189.904 kb on + strand, within MPMX26_01121at 1189.904 kb on + strand, within MPMX26_01121at 1189.904 kb on + strand, within MPMX26_01121at 1189.953 kb on + strand, within MPMX26_01121at 1189.953 kb on + strand, within MPMX26_01121at 1189.953 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1189.968 kb on + strand, within MPMX26_01121at 1190.048 kb on + strand, within MPMX26_01121at 1190.059 kb on + strand, within MPMX26_01121at 1190.070 kb on + strand, within MPMX26_01121at 1190.077 kb on + strand, within MPMX26_01121at 1190.079 kb on + strand, within MPMX26_01121at 1190.079 kb on + strand, within MPMX26_01121at 1190.089 kb on + strand, within MPMX26_01121at 1190.089 kb on + strand, within MPMX26_01121at 1190.095 kb on + strand, within MPMX26_01121at 1190.095 kb on + strand, within MPMX26_01121at 1190.096 kb on + strand, within MPMX26_01121at 1190.115 kb on + strand, within MPMX26_01121at 1190.116 kb on + strand, within MPMX26_01121at 1190.117 kb on + strand, within MPMX26_01121at 1190.131 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.136 kb on + strand, within MPMX26_01121at 1190.146 kb on + strand, within MPMX26_01121at 1190.226 kb on + strand, within MPMX26_01121at 1190.228 kb on + strand, within MPMX26_01121at 1190.279 kb on + strandat 1190.291 kb on + strandat 1190.344 kb on + strandat 1190.398 kb on + strandat 1190.560 kb on + strand, within MPMX26_01122at 1190.570 kb on + strand, within MPMX26_01122at 1190.633 kb on + strand, within MPMX26_01122at 1190.639 kb on + strand, within MPMX26_01122at 1190.639 kb on + strand, within MPMX26_01122at 1190.639 kb on + strand, within MPMX26_01122at 1190.666 kb on + strand, within MPMX26_01122at 1190.691 kb on + strand, within MPMX26_01122at 1190.691 kb on + strand, within MPMX26_01122at 1190.691 kb on + strand, within MPMX26_01122

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,187,774 + MPMX26_01118 0.66 +0.4
1,187,774 + MPMX26_01118 0.66 +0.8
1,187,774 + MPMX26_01118 0.66 +0.5
1,187,774 + MPMX26_01118 0.66 +0.3
1,187,774 + MPMX26_01118 0.66 -2.6
1,187,779 + MPMX26_01118 0.67 +0.3
1,187,914 + MPMX26_01118 0.78 +0.1
1,187,929 + MPMX26_01118 0.80 -0.4
1,187,965 + MPMX26_01118 0.83 -0.1
1,188,002 + MPMX26_01118 0.86 -1.6
1,188,002 + MPMX26_01118 0.86 -0.5
1,188,002 + MPMX26_01118 0.86 +0.4
1,188,002 + MPMX26_01118 0.86 -1.0
1,188,002 + MPMX26_01118 0.86 -1.0
1,188,002 + MPMX26_01118 0.86 +0.2
1,188,002 + MPMX26_01118 0.86 +0.3
1,188,002 + MPMX26_01118 0.86 -0.6
1,188,002 + MPMX26_01118 0.86 +0.1
1,188,002 + MPMX26_01118 0.86 -0.1
1,188,118 + -1.4
1,188,118 + -0.3
1,188,118 + +1.2
1,188,131 + -0.4
1,188,210 + MPMX26_01119 0.10 -0.0
1,188,282 + MPMX26_01119 0.25 +0.1
1,188,282 + MPMX26_01119 0.25 -2.6
1,188,282 + MPMX26_01119 0.25 +0.1
1,188,282 + MPMX26_01119 0.25 -0.9
1,188,289 + MPMX26_01119 0.27 -1.5
1,188,303 + MPMX26_01119 0.30 -1.4
1,188,304 + MPMX26_01119 0.30 -0.7
1,188,304 + MPMX26_01119 0.30 -0.7
1,188,304 + MPMX26_01119 0.30 -0.6
1,188,304 + MPMX26_01119 0.30 -0.3
1,188,304 + MPMX26_01119 0.30 -0.2
1,188,304 + MPMX26_01119 0.30 -2.2
1,188,376 + MPMX26_01119 0.45 -0.5
1,188,381 + MPMX26_01119 0.46 -0.9
1,188,386 + MPMX26_01119 0.47 +0.5
1,188,457 + MPMX26_01119 0.62 +0.4
1,188,457 + MPMX26_01119 0.62 +0.6
1,188,478 + MPMX26_01119 0.66 +0.6
1,188,478 + MPMX26_01119 0.66 +0.3
1,188,478 + MPMX26_01119 0.66 +0.7
1,188,522 + MPMX26_01119 0.75 -0.3
1,188,532 + MPMX26_01119 0.78 -0.0
1,188,532 + MPMX26_01119 0.78 -0.3
1,188,543 + MPMX26_01119 0.80 -2.0
1,188,549 + MPMX26_01119 0.81 +0.6
1,188,621 + -0.0
1,188,732 + -1.4
1,188,732 + -1.0
1,188,732 + -2.3
1,188,732 + -1.4
1,188,732 + -1.7
1,188,837 + MPMX26_01120 0.11 -0.7
1,188,856 + MPMX26_01120 0.13 -1.0
1,188,856 + MPMX26_01120 0.13 -1.6
1,188,907 + MPMX26_01120 0.18 -1.2
1,189,035 + MPMX26_01120 0.30 -2.8
1,189,046 + MPMX26_01120 0.31 -1.0
1,189,071 + MPMX26_01120 0.34 -1.0
1,189,174 + MPMX26_01120 0.44 -0.4
1,189,182 + MPMX26_01120 0.45 -2.0
1,189,323 + MPMX26_01120 0.59 -1.2
1,189,446 + MPMX26_01120 0.71 -2.6
1,189,462 + MPMX26_01120 0.73 -1.0
1,189,462 + MPMX26_01120 0.73 -1.4
1,189,485 + MPMX26_01120 0.75 -1.9
1,189,486 + MPMX26_01120 0.75 -1.4
1,189,486 + MPMX26_01120 0.75 -1.0
1,189,486 + MPMX26_01120 0.75 -0.7
1,189,486 + MPMX26_01120 0.75 -1.4
1,189,486 + MPMX26_01120 0.75 -0.2
1,189,496 + MPMX26_01120 0.76 -1.2
1,189,496 + MPMX26_01120 0.76 -1.7
1,189,496 + MPMX26_01120 0.76 -1.0
1,189,496 + MPMX26_01120 0.76 -1.2
1,189,496 + MPMX26_01120 0.76 -0.4
1,189,496 + MPMX26_01120 0.76 -0.7
1,189,496 + MPMX26_01120 0.76 -1.7
1,189,496 + MPMX26_01120 0.76 -1.0
1,189,501 + MPMX26_01120 0.77 -1.4
1,189,501 + MPMX26_01120 0.77 -0.7
1,189,508 + MPMX26_01120 0.77 -1.0
1,189,513 + MPMX26_01120 0.78 -2.0
1,189,591 + MPMX26_01120 0.86 -1.0
1,189,596 + MPMX26_01120 0.86 -0.7
1,189,596 + MPMX26_01120 0.86 -0.7
1,189,596 + MPMX26_01120 0.86 -1.7
1,189,596 + MPMX26_01120 0.86 -3.3
1,189,642 + -0.7
1,189,668 + -1.0
1,189,668 + -1.0
1,189,668 + -0.0
1,189,668 + -1.9
1,189,668 + -1.6
1,189,678 + -1.0
1,189,678 + -0.7
1,189,683 + -1.0
1,189,683 + -0.7
1,189,683 + -1.4
1,189,715 + +0.6
1,189,715 + +0.7
1,189,773 + -0.0
1,189,773 + +0.4
1,189,776 + +0.4
1,189,783 + +0.9
1,189,785 + +0.1
1,189,785 + +0.1
1,189,785 + -0.6
1,189,785 + -0.4
1,189,785 + +1.0
1,189,785 + +0.3
1,189,785 + -0.4
1,189,785 + +0.3
1,189,894 + MPMX26_01121 0.27 -0.3
1,189,894 + MPMX26_01121 0.27 +0.4
1,189,894 + MPMX26_01121 0.27 +0.2
1,189,904 + MPMX26_01121 0.28 +0.3
1,189,904 + MPMX26_01121 0.28 +0.9
1,189,904 + MPMX26_01121 0.28 -0.0
1,189,953 + MPMX26_01121 0.37 +1.3
1,189,953 + MPMX26_01121 0.37 -0.2
1,189,953 + MPMX26_01121 0.37 +0.7
1,189,968 + MPMX26_01121 0.39 +0.8
1,189,968 + MPMX26_01121 0.39 +0.1
1,189,968 + MPMX26_01121 0.39 +0.2
1,189,968 + MPMX26_01121 0.39 +0.7
1,189,968 + MPMX26_01121 0.39 +1.0
1,189,968 + MPMX26_01121 0.39 +0.7
1,190,048 + MPMX26_01121 0.53 -1.2
1,190,059 + MPMX26_01121 0.55 -0.0
1,190,070 + MPMX26_01121 0.56 -0.2
1,190,077 + MPMX26_01121 0.58 +0.3
1,190,079 + MPMX26_01121 0.58 -0.2
1,190,079 + MPMX26_01121 0.58 -0.1
1,190,089 + MPMX26_01121 0.60 +0.2
1,190,089 + MPMX26_01121 0.60 +0.3
1,190,095 + MPMX26_01121 0.61 +1.1
1,190,095 + MPMX26_01121 0.61 -1.6
1,190,096 + MPMX26_01121 0.61 +0.5
1,190,115 + MPMX26_01121 0.64 -0.0
1,190,116 + MPMX26_01121 0.64 -0.2
1,190,117 + MPMX26_01121 0.64 +0.1
1,190,131 + MPMX26_01121 0.67 -1.7
1,190,136 + MPMX26_01121 0.68 +0.7
1,190,136 + MPMX26_01121 0.68 +0.6
1,190,136 + MPMX26_01121 0.68 +0.7
1,190,136 + MPMX26_01121 0.68 +0.8
1,190,136 + MPMX26_01121 0.68 +0.5
1,190,136 + MPMX26_01121 0.68 +0.4
1,190,136 + MPMX26_01121 0.68 +0.9
1,190,146 + MPMX26_01121 0.69 +1.1
1,190,226 + MPMX26_01121 0.83 +0.4
1,190,228 + MPMX26_01121 0.83 +0.2
1,190,279 + +1.4
1,190,291 + -0.0
1,190,344 + -1.2
1,190,398 + -4.5
1,190,560 + MPMX26_01122 0.14 -5.4
1,190,570 + MPMX26_01122 0.14 -2.9
1,190,633 + MPMX26_01122 0.18 -3.1
1,190,639 + MPMX26_01122 0.19 -5.2
1,190,639 + MPMX26_01122 0.19 -4.0
1,190,639 + MPMX26_01122 0.19 -2.4
1,190,666 + MPMX26_01122 0.21 -2.9
1,190,691 + MPMX26_01122 0.22 -3.3
1,190,691 + MPMX26_01122 0.22 -4.0
1,190,691 + MPMX26_01122 0.22 -3.5

Or see this region's nucleotide sequence