Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01047

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01046 and MPMX26_01047 are separated by 56 nucleotidesMPMX26_01047 and MPMX26_01048 are separated by 17 nucleotides MPMX26_01046: MPMX26_01046 - Adenylosuccinate lyase, at 1,109,593 to 1,110,981 _01046 MPMX26_01047: MPMX26_01047 - High frequency lysogenization protein HflD, at 1,111,038 to 1,111,769 _01047 MPMX26_01048: MPMX26_01048 - tRNA-specific 2-thiouridylase MnmA, at 1,111,787 to 1,112,920 _01048 Position (kb) 1111 1112Strain fitness (log2 ratio) -2 -1 0 1 2at 1111.160 kb on - strand, within MPMX26_01047at 1111.167 kb on - strand, within MPMX26_01047at 1111.167 kb on - strand, within MPMX26_01047at 1111.167 kb on - strand, within MPMX26_01047at 1111.170 kb on - strand, within MPMX26_01047at 1111.209 kb on - strand, within MPMX26_01047at 1111.256 kb on - strand, within MPMX26_01047at 1111.258 kb on - strand, within MPMX26_01047at 1111.272 kb on - strand, within MPMX26_01047at 1111.272 kb on - strand, within MPMX26_01047at 1111.272 kb on - strand, within MPMX26_01047at 1111.272 kb on - strand, within MPMX26_01047at 1111.272 kb on - strand, within MPMX26_01047at 1111.272 kb on - strand, within MPMX26_01047at 1111.272 kb on - strand, within MPMX26_01047at 1111.272 kb on - strand, within MPMX26_01047at 1111.277 kb on - strand, within MPMX26_01047at 1111.277 kb on - strand, within MPMX26_01047at 1111.299 kb on - strand, within MPMX26_01047at 1111.421 kb on - strand, within MPMX26_01047at 1111.527 kb on - strand, within MPMX26_01047at 1111.812 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,111,160 - MPMX26_01047 0.17 +1.1
1,111,167 - MPMX26_01047 0.18 +1.1
1,111,167 - MPMX26_01047 0.18 +0.9
1,111,167 - MPMX26_01047 0.18 +0.7
1,111,170 - MPMX26_01047 0.18 +0.2
1,111,209 - MPMX26_01047 0.23 +1.1
1,111,256 - MPMX26_01047 0.30 +0.9
1,111,258 - MPMX26_01047 0.30 -0.0
1,111,272 - MPMX26_01047 0.32 +0.5
1,111,272 - MPMX26_01047 0.32 +0.5
1,111,272 - MPMX26_01047 0.32 +0.8
1,111,272 - MPMX26_01047 0.32 +2.1
1,111,272 - MPMX26_01047 0.32 +0.3
1,111,272 - MPMX26_01047 0.32 +1.2
1,111,272 - MPMX26_01047 0.32 +0.5
1,111,272 - MPMX26_01047 0.32 +1.1
1,111,277 - MPMX26_01047 0.33 +1.4
1,111,277 - MPMX26_01047 0.33 +0.5
1,111,299 - MPMX26_01047 0.36 +0.1
1,111,421 - MPMX26_01047 0.52 -2.0
1,111,527 - MPMX26_01047 0.67 -1.4
1,111,812 - -0.3

Or see this region's nucleotide sequence