Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01008 and MPMX26_01009 are separated by 516 nucleotides MPMX26_01009 and MPMX26_01010 are separated by 225 nucleotides
MPMX26_01008: MPMX26_01008 - hypothetical protein, at 1,061,132 to 1,062,835
_01008
MPMX26_01009: MPMX26_01009 - Isocitrate dehydrogenase [NADP], at 1,063,352 to 1,065,589
_01009
MPMX26_01010: MPMX26_01010 - hypothetical protein, at 1,065,815 to 1,066,831
_01010
Position (kb)
1063
1064
1065
1066 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1062.412 kb on + strand, within MPMX26_01008 at 1062.419 kb on + strand, within MPMX26_01008 at 1062.429 kb on + strand, within MPMX26_01008 at 1062.429 kb on + strand, within MPMX26_01008 at 1062.429 kb on + strand, within MPMX26_01008 at 1062.451 kb on + strand, within MPMX26_01008 at 1062.484 kb on + strand, within MPMX26_01008 at 1062.505 kb on + strand, within MPMX26_01008 at 1062.570 kb on + strand, within MPMX26_01008 at 1062.585 kb on + strand, within MPMX26_01008 at 1062.596 kb on + strand, within MPMX26_01008 at 1062.654 kb on + strand, within MPMX26_01008 at 1062.666 kb on + strand at 1062.666 kb on + strand at 1062.666 kb on + strand at 1062.666 kb on + strand at 1062.726 kb on + strand at 1062.729 kb on + strand at 1062.752 kb on + strand at 1062.752 kb on + strand at 1062.752 kb on + strand at 1062.752 kb on + strand at 1062.762 kb on + strand at 1062.770 kb on + strand at 1062.770 kb on + strand at 1062.770 kb on + strand at 1062.770 kb on + strand at 1062.770 kb on + strand at 1062.839 kb on + strand at 1062.844 kb on + strand at 1063.254 kb on + strand at 1063.255 kb on + strand at 1063.297 kb on + strand at 1063.311 kb on + strand at 1063.343 kb on + strand at 1063.348 kb on + strand at 1063.458 kb on + strand at 1063.551 kb on + strand at 1063.623 kb on + strand, within MPMX26_01009 at 1063.644 kb on + strand, within MPMX26_01009 at 1063.761 kb on + strand, within MPMX26_01009 at 1063.761 kb on + strand, within MPMX26_01009 at 1063.766 kb on + strand, within MPMX26_01009 at 1063.837 kb on + strand, within MPMX26_01009 at 1063.837 kb on + strand, within MPMX26_01009 at 1064.226 kb on + strand, within MPMX26_01009 at 1064.242 kb on + strand, within MPMX26_01009 at 1064.242 kb on + strand, within MPMX26_01009 at 1064.311 kb on + strand, within MPMX26_01009 at 1064.311 kb on + strand, within MPMX26_01009 at 1064.319 kb on + strand, within MPMX26_01009 at 1064.324 kb on + strand, within MPMX26_01009 at 1064.350 kb on + strand, within MPMX26_01009 at 1064.350 kb on + strand, within MPMX26_01009 at 1064.465 kb on + strand, within MPMX26_01009 at 1064.465 kb on + strand, within MPMX26_01009 at 1064.465 kb on + strand, within MPMX26_01009 at 1064.473 kb on + strand, within MPMX26_01009 at 1064.576 kb on + strand, within MPMX26_01009 at 1064.578 kb on + strand, within MPMX26_01009 at 1064.578 kb on + strand, within MPMX26_01009 at 1064.578 kb on + strand, within MPMX26_01009 at 1064.626 kb on + strand, within MPMX26_01009 at 1064.634 kb on + strand, within MPMX26_01009 at 1064.731 kb on + strand, within MPMX26_01009 at 1064.766 kb on + strand, within MPMX26_01009 at 1064.815 kb on + strand, within MPMX26_01009 at 1064.825 kb on + strand, within MPMX26_01009 at 1064.897 kb on + strand, within MPMX26_01009 at 1065.004 kb on + strand, within MPMX26_01009 at 1065.037 kb on + strand, within MPMX26_01009 at 1065.037 kb on + strand, within MPMX26_01009 at 1065.037 kb on + strand, within MPMX26_01009 at 1065.037 kb on + strand, within MPMX26_01009 at 1065.224 kb on + strand, within MPMX26_01009 at 1065.328 kb on + strand, within MPMX26_01009 at 1065.422 kb on + strand at 1065.422 kb on + strand at 1065.502 kb on + strand at 1065.502 kb on + strand at 1065.584 kb on + strand at 1065.584 kb on + strand at 1065.584 kb on + strand at 1065.584 kb on + strand at 1065.594 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 1,062,412 + MPMX26_01008 0.75 +0.2 1,062,419 + MPMX26_01008 0.76 +0.1 1,062,429 + MPMX26_01008 0.76 -0.9 1,062,429 + MPMX26_01008 0.76 -0.2 1,062,429 + MPMX26_01008 0.76 +0.1 1,062,451 + MPMX26_01008 0.77 -1.1 1,062,484 + MPMX26_01008 0.79 -0.5 1,062,505 + MPMX26_01008 0.81 -0.9 1,062,570 + MPMX26_01008 0.84 -0.4 1,062,585 + MPMX26_01008 0.85 -0.8 1,062,596 + MPMX26_01008 0.86 -0.7 1,062,654 + MPMX26_01008 0.89 -1.9 1,062,666 + +1.0 1,062,666 + -0.0 1,062,666 + -0.8 1,062,666 + -1.2 1,062,726 + -0.0 1,062,729 + -2.0 1,062,752 + -1.6 1,062,752 + -1.2 1,062,752 + -0.2 1,062,752 + -2.4 1,062,762 + -2.9 1,062,770 + -0.9 1,062,770 + +0.1 1,062,770 + -0.2 1,062,770 + -0.9 1,062,770 + -0.1 1,062,839 + +0.6 1,062,844 + +0.4 1,063,254 + -1.3 1,063,255 + -0.8 1,063,297 + +1.2 1,063,311 + -0.7 1,063,343 + -1.0 1,063,348 + -1.0 1,063,458 + +1.6 1,063,551 + +2.7 1,063,623 + MPMX26_01009 0.12 -1.2 1,063,644 + MPMX26_01009 0.13 +0.6 1,063,761 + MPMX26_01009 0.18 -1.6 1,063,761 + MPMX26_01009 0.18 -2.3 1,063,766 + MPMX26_01009 0.18 -0.4 1,063,837 + MPMX26_01009 0.22 -1.6 1,063,837 + MPMX26_01009 0.22 +0.4 1,064,226 + MPMX26_01009 0.39 -1.6 1,064,242 + MPMX26_01009 0.40 -1.2 1,064,242 + MPMX26_01009 0.40 -1.2 1,064,311 + MPMX26_01009 0.43 -1.4 1,064,311 + MPMX26_01009 0.43 +1.9 1,064,319 + MPMX26_01009 0.43 +1.0 1,064,324 + MPMX26_01009 0.43 -0.4 1,064,350 + MPMX26_01009 0.45 -1.4 1,064,350 + MPMX26_01009 0.45 -1.0 1,064,465 + MPMX26_01009 0.50 -1.6 1,064,465 + MPMX26_01009 0.50 -1.6 1,064,465 + MPMX26_01009 0.50 -1.3 1,064,473 + MPMX26_01009 0.50 -0.8 1,064,576 + MPMX26_01009 0.55 -1.2 1,064,578 + MPMX26_01009 0.55 -1.4 1,064,578 + MPMX26_01009 0.55 -1.4 1,064,578 + MPMX26_01009 0.55 -0.6 1,064,626 + MPMX26_01009 0.57 +0.6 1,064,634 + MPMX26_01009 0.57 -0.0 1,064,731 + MPMX26_01009 0.62 -1.0 1,064,766 + MPMX26_01009 0.63 -1.4 1,064,815 + MPMX26_01009 0.65 -0.2 1,064,825 + MPMX26_01009 0.66 -2.0 1,064,897 + MPMX26_01009 0.69 +1.1 1,065,004 + MPMX26_01009 0.74 -0.9 1,065,037 + MPMX26_01009 0.75 -0.8 1,065,037 + MPMX26_01009 0.75 -0.4 1,065,037 + MPMX26_01009 0.75 -1.6 1,065,037 + MPMX26_01009 0.75 -0.8 1,065,224 + MPMX26_01009 0.84 -1.8 1,065,328 + MPMX26_01009 0.88 -1.2 1,065,422 + -1.0 1,065,422 + -2.1 1,065,502 + +0.8 1,065,502 + -1.0 1,065,584 + -0.1 1,065,584 + +1.2 1,065,584 + +0.4 1,065,584 + +1.1 1,065,594 + +1.1
Or see this region's nucleotide sequence