Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00960

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00959 and MPMX26_00960 are separated by 22 nucleotidesMPMX26_00960 and MPMX26_00961 are separated by 380 nucleotides MPMX26_00959: MPMX26_00959 - hypothetical protein, at 1,007,301 to 1,008,404 _00959 MPMX26_00960: MPMX26_00960 - Protein ClpV1, at 1,008,427 to 1,011,114 _00960 MPMX26_00961: MPMX26_00961 - hypothetical protein, at 1,011,495 to 1,012,181 _00961 Position (kb) 1008 1009 1010 1011 1012Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1007.439 kb on - strand, within MPMX26_00959at 1007.556 kb on - strand, within MPMX26_00959at 1007.559 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.640 kb on - strand, within MPMX26_00959at 1007.646 kb on - strand, within MPMX26_00959at 1007.741 kb on - strand, within MPMX26_00959at 1007.741 kb on - strand, within MPMX26_00959at 1007.892 kb on - strand, within MPMX26_00959at 1007.901 kb on - strand, within MPMX26_00959at 1007.976 kb on - strand, within MPMX26_00959at 1008.006 kb on - strand, within MPMX26_00959at 1008.242 kb on - strand, within MPMX26_00959at 1008.882 kb on - strand, within MPMX26_00960at 1008.882 kb on - strand, within MPMX26_00960at 1008.906 kb on - strand, within MPMX26_00960at 1008.906 kb on - strand, within MPMX26_00960at 1008.906 kb on - strand, within MPMX26_00960at 1009.081 kb on - strand, within MPMX26_00960at 1009.164 kb on - strand, within MPMX26_00960at 1009.216 kb on - strand, within MPMX26_00960at 1009.216 kb on - strand, within MPMX26_00960at 1009.216 kb on - strand, within MPMX26_00960at 1009.218 kb on - strand, within MPMX26_00960at 1009.269 kb on - strand, within MPMX26_00960at 1009.355 kb on - strand, within MPMX26_00960at 1009.368 kb on - strand, within MPMX26_00960at 1009.449 kb on - strand, within MPMX26_00960at 1009.449 kb on - strand, within MPMX26_00960at 1009.518 kb on - strand, within MPMX26_00960at 1009.581 kb on - strand, within MPMX26_00960at 1009.654 kb on - strand, within MPMX26_00960at 1009.684 kb on - strand, within MPMX26_00960at 1009.684 kb on - strand, within MPMX26_00960at 1009.684 kb on - strand, within MPMX26_00960at 1009.692 kb on - strand, within MPMX26_00960at 1009.771 kb on - strand, within MPMX26_00960at 1009.816 kb on - strand, within MPMX26_00960at 1009.849 kb on - strand, within MPMX26_00960at 1009.849 kb on - strand, within MPMX26_00960at 1009.851 kb on - strand, within MPMX26_00960at 1009.851 kb on - strand, within MPMX26_00960at 1009.851 kb on - strand, within MPMX26_00960at 1009.954 kb on - strand, within MPMX26_00960at 1009.981 kb on - strand, within MPMX26_00960at 1010.046 kb on - strand, within MPMX26_00960at 1010.046 kb on - strand, within MPMX26_00960at 1010.046 kb on - strand, within MPMX26_00960at 1010.046 kb on - strand, within MPMX26_00960at 1010.091 kb on - strand, within MPMX26_00960at 1010.109 kb on - strand, within MPMX26_00960at 1010.157 kb on - strand, within MPMX26_00960at 1010.157 kb on - strand, within MPMX26_00960at 1010.167 kb on - strand, within MPMX26_00960at 1010.190 kb on - strand, within MPMX26_00960at 1010.190 kb on - strand, within MPMX26_00960at 1010.232 kb on - strand, within MPMX26_00960at 1010.232 kb on - strand, within MPMX26_00960at 1010.232 kb on - strand, within MPMX26_00960at 1010.232 kb on - strand, within MPMX26_00960at 1010.616 kb on - strand, within MPMX26_00960at 1010.616 kb on - strand, within MPMX26_00960at 1010.616 kb on - strand, within MPMX26_00960at 1010.629 kb on - strand, within MPMX26_00960at 1010.629 kb on - strand, within MPMX26_00960at 1010.812 kb on - strand, within MPMX26_00960at 1010.966 kb on - strandat 1010.966 kb on - strandat 1011.521 kb on + strandat 1011.531 kb on + strandat 1011.560 kb on + strandat 1011.560 kb on + strandat 1011.576 kb on + strand, within MPMX26_00961at 1011.621 kb on + strand, within MPMX26_00961at 1011.633 kb on + strand, within MPMX26_00961at 1011.700 kb on + strand, within MPMX26_00961at 1011.723 kb on + strand, within MPMX26_00961at 1011.723 kb on + strand, within MPMX26_00961at 1011.811 kb on + strand, within MPMX26_00961at 1011.900 kb on + strand, within MPMX26_00961at 1011.905 kb on + strand, within MPMX26_00961at 1011.933 kb on + strand, within MPMX26_00961at 1011.947 kb on + strand, within MPMX26_00961at 1012.023 kb on + strand, within MPMX26_00961at 1012.023 kb on + strand, within MPMX26_00961at 1012.023 kb on + strand, within MPMX26_00961at 1012.076 kb on + strand, within MPMX26_00961at 1012.076 kb on + strand, within MPMX26_00961at 1012.076 kb on + strand, within MPMX26_00961at 1012.076 kb on + strand, within MPMX26_00961at 1012.108 kb on + strand, within MPMX26_00961

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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1,007,439 - MPMX26_00959 0.12 -0.7
1,007,556 - MPMX26_00959 0.23 -0.2
1,007,559 - MPMX26_00959 0.23 +0.3
1,007,630 - MPMX26_00959 0.30 -0.6
1,007,630 - MPMX26_00959 0.30 +0.4
1,007,630 - MPMX26_00959 0.30 -0.2
1,007,630 - MPMX26_00959 0.30 +1.0
1,007,640 - MPMX26_00959 0.31 +0.2
1,007,646 - MPMX26_00959 0.31 +0.6
1,007,741 - MPMX26_00959 0.40 +0.1
1,007,741 - MPMX26_00959 0.40 -0.5
1,007,892 - MPMX26_00959 0.54 +0.7
1,007,901 - MPMX26_00959 0.54 -0.8
1,007,976 - MPMX26_00959 0.61 +1.1
1,008,006 - MPMX26_00959 0.64 -2.4
1,008,242 - MPMX26_00959 0.85 +1.1
1,008,882 - MPMX26_00960 0.17 -2.0
1,008,882 - MPMX26_00960 0.17 -1.2
1,008,906 - MPMX26_00960 0.18 -0.7
1,008,906 - MPMX26_00960 0.18 -0.2
1,008,906 - MPMX26_00960 0.18 +0.1
1,009,081 - MPMX26_00960 0.24 -0.7
1,009,164 - MPMX26_00960 0.27 -2.3
1,009,216 - MPMX26_00960 0.29 -1.2
1,009,216 - MPMX26_00960 0.29 +1.8
1,009,216 - MPMX26_00960 0.29 -1.0
1,009,218 - MPMX26_00960 0.29 +0.7
1,009,269 - MPMX26_00960 0.31 -0.7
1,009,355 - MPMX26_00960 0.35 -0.0
1,009,368 - MPMX26_00960 0.35 -0.9
1,009,449 - MPMX26_00960 0.38 -0.6
1,009,449 - MPMX26_00960 0.38 -3.4
1,009,518 - MPMX26_00960 0.41 +0.6
1,009,581 - MPMX26_00960 0.43 +0.3
1,009,654 - MPMX26_00960 0.46 -0.3
1,009,684 - MPMX26_00960 0.47 +0.8
1,009,684 - MPMX26_00960 0.47 +2.1
1,009,684 - MPMX26_00960 0.47 -2.0
1,009,692 - MPMX26_00960 0.47 +0.9
1,009,771 - MPMX26_00960 0.50 -1.5
1,009,816 - MPMX26_00960 0.52 +0.0
1,009,849 - MPMX26_00960 0.53 -1.6
1,009,849 - MPMX26_00960 0.53 +0.9
1,009,851 - MPMX26_00960 0.53 -0.3
1,009,851 - MPMX26_00960 0.53 +0.1
1,009,851 - MPMX26_00960 0.53 -0.8
1,009,954 - MPMX26_00960 0.57 -1.4
1,009,981 - MPMX26_00960 0.58 -0.2
1,010,046 - MPMX26_00960 0.60 -1.6
1,010,046 - MPMX26_00960 0.60 -1.2
1,010,046 - MPMX26_00960 0.60 +0.0
1,010,046 - MPMX26_00960 0.60 +0.2
1,010,091 - MPMX26_00960 0.62 +0.5
1,010,109 - MPMX26_00960 0.63 +0.2
1,010,157 - MPMX26_00960 0.64 +0.6
1,010,157 - MPMX26_00960 0.64 -1.0
1,010,167 - MPMX26_00960 0.65 -1.6
1,010,190 - MPMX26_00960 0.66 -0.2
1,010,190 - MPMX26_00960 0.66 -0.1
1,010,232 - MPMX26_00960 0.67 +1.7
1,010,232 - MPMX26_00960 0.67 +2.6
1,010,232 - MPMX26_00960 0.67 +1.3
1,010,232 - MPMX26_00960 0.67 -0.4
1,010,616 - MPMX26_00960 0.81 +0.5
1,010,616 - MPMX26_00960 0.81 -0.5
1,010,616 - MPMX26_00960 0.81 +0.3
1,010,629 - MPMX26_00960 0.82 -0.2
1,010,629 - MPMX26_00960 0.82 +1.2
1,010,812 - MPMX26_00960 0.89 +0.1
1,010,966 - +0.7
1,010,966 - +0.7
1,011,521 + -0.8
1,011,531 + -0.4
1,011,560 + +0.1
1,011,560 + +0.1
1,011,576 + MPMX26_00961 0.12 +0.4
1,011,621 + MPMX26_00961 0.18 +0.3
1,011,633 + MPMX26_00961 0.20 +0.4
1,011,700 + MPMX26_00961 0.30 -0.5
1,011,723 + MPMX26_00961 0.33 -0.1
1,011,723 + MPMX26_00961 0.33 +0.6
1,011,811 + MPMX26_00961 0.46 -0.1
1,011,900 + MPMX26_00961 0.59 +0.4
1,011,905 + MPMX26_00961 0.60 +0.9
1,011,933 + MPMX26_00961 0.64 +0.4
1,011,947 + MPMX26_00961 0.66 -0.2
1,012,023 + MPMX26_00961 0.77 +1.6
1,012,023 + MPMX26_00961 0.77 +0.3
1,012,023 + MPMX26_00961 0.77 +1.1
1,012,076 + MPMX26_00961 0.85 +0.1
1,012,076 + MPMX26_00961 0.85 +0.4
1,012,076 + MPMX26_00961 0.85 -0.1
1,012,076 + MPMX26_00961 0.85 -1.3
1,012,108 + MPMX26_00961 0.89 +0.4

Or see this region's nucleotide sequence