Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00959 and MPMX26_00960 are separated by 22 nucleotides MPMX26_00960 and MPMX26_00961 are separated by 380 nucleotides
MPMX26_00959: MPMX26_00959 - hypothetical protein, at 1,007,301 to 1,008,404
_00959
MPMX26_00960: MPMX26_00960 - Protein ClpV1, at 1,008,427 to 1,011,114
_00960
MPMX26_00961: MPMX26_00961 - hypothetical protein, at 1,011,495 to 1,012,181
_00961
Position (kb)
1008
1009
1010
1011
1012 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1007.439 kb on - strand, within MPMX26_00959 at 1007.556 kb on - strand, within MPMX26_00959 at 1007.559 kb on - strand, within MPMX26_00959 at 1007.630 kb on - strand, within MPMX26_00959 at 1007.630 kb on - strand, within MPMX26_00959 at 1007.630 kb on - strand, within MPMX26_00959 at 1007.630 kb on - strand, within MPMX26_00959 at 1007.640 kb on - strand, within MPMX26_00959 at 1007.646 kb on - strand, within MPMX26_00959 at 1007.741 kb on - strand, within MPMX26_00959 at 1007.741 kb on - strand, within MPMX26_00959 at 1007.892 kb on - strand, within MPMX26_00959 at 1007.901 kb on - strand, within MPMX26_00959 at 1007.976 kb on - strand, within MPMX26_00959 at 1008.006 kb on - strand, within MPMX26_00959 at 1008.242 kb on - strand, within MPMX26_00959 at 1008.882 kb on - strand, within MPMX26_00960 at 1008.882 kb on - strand, within MPMX26_00960 at 1008.906 kb on - strand, within MPMX26_00960 at 1008.906 kb on - strand, within MPMX26_00960 at 1008.906 kb on - strand, within MPMX26_00960 at 1009.081 kb on - strand, within MPMX26_00960 at 1009.164 kb on - strand, within MPMX26_00960 at 1009.216 kb on - strand, within MPMX26_00960 at 1009.216 kb on - strand, within MPMX26_00960 at 1009.216 kb on - strand, within MPMX26_00960 at 1009.218 kb on - strand, within MPMX26_00960 at 1009.269 kb on - strand, within MPMX26_00960 at 1009.355 kb on - strand, within MPMX26_00960 at 1009.368 kb on - strand, within MPMX26_00960 at 1009.449 kb on - strand, within MPMX26_00960 at 1009.449 kb on - strand, within MPMX26_00960 at 1009.518 kb on - strand, within MPMX26_00960 at 1009.581 kb on - strand, within MPMX26_00960 at 1009.654 kb on - strand, within MPMX26_00960 at 1009.684 kb on - strand, within MPMX26_00960 at 1009.684 kb on - strand, within MPMX26_00960 at 1009.684 kb on - strand, within MPMX26_00960 at 1009.692 kb on - strand, within MPMX26_00960 at 1009.771 kb on - strand, within MPMX26_00960 at 1009.816 kb on - strand, within MPMX26_00960 at 1009.849 kb on - strand, within MPMX26_00960 at 1009.849 kb on - strand, within MPMX26_00960 at 1009.851 kb on - strand, within MPMX26_00960 at 1009.851 kb on - strand, within MPMX26_00960 at 1009.851 kb on - strand, within MPMX26_00960 at 1009.954 kb on - strand, within MPMX26_00960 at 1009.981 kb on - strand, within MPMX26_00960 at 1010.046 kb on - strand, within MPMX26_00960 at 1010.046 kb on - strand, within MPMX26_00960 at 1010.046 kb on - strand, within MPMX26_00960 at 1010.046 kb on - strand, within MPMX26_00960 at 1010.091 kb on - strand, within MPMX26_00960 at 1010.109 kb on - strand, within MPMX26_00960 at 1010.157 kb on - strand, within MPMX26_00960 at 1010.157 kb on - strand, within MPMX26_00960 at 1010.167 kb on - strand, within MPMX26_00960 at 1010.190 kb on - strand, within MPMX26_00960 at 1010.190 kb on - strand, within MPMX26_00960 at 1010.232 kb on - strand, within MPMX26_00960 at 1010.232 kb on - strand, within MPMX26_00960 at 1010.232 kb on - strand, within MPMX26_00960 at 1010.232 kb on - strand, within MPMX26_00960 at 1010.616 kb on - strand, within MPMX26_00960 at 1010.616 kb on - strand, within MPMX26_00960 at 1010.616 kb on - strand, within MPMX26_00960 at 1010.629 kb on - strand, within MPMX26_00960 at 1010.629 kb on - strand, within MPMX26_00960 at 1010.812 kb on - strand, within MPMX26_00960 at 1010.966 kb on - strand at 1010.966 kb on - strand at 1011.521 kb on + strand at 1011.531 kb on + strand at 1011.560 kb on + strand at 1011.560 kb on + strand at 1011.576 kb on + strand, within MPMX26_00961 at 1011.621 kb on + strand, within MPMX26_00961 at 1011.633 kb on + strand, within MPMX26_00961 at 1011.700 kb on + strand, within MPMX26_00961 at 1011.723 kb on + strand, within MPMX26_00961 at 1011.723 kb on + strand, within MPMX26_00961 at 1011.811 kb on + strand, within MPMX26_00961 at 1011.900 kb on + strand, within MPMX26_00961 at 1011.905 kb on + strand, within MPMX26_00961 at 1011.933 kb on + strand, within MPMX26_00961 at 1011.947 kb on + strand, within MPMX26_00961 at 1012.023 kb on + strand, within MPMX26_00961 at 1012.023 kb on + strand, within MPMX26_00961 at 1012.023 kb on + strand, within MPMX26_00961 at 1012.076 kb on + strand, within MPMX26_00961 at 1012.076 kb on + strand, within MPMX26_00961 at 1012.076 kb on + strand, within MPMX26_00961 at 1012.076 kb on + strand, within MPMX26_00961 at 1012.108 kb on + strand, within MPMX26_00961
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 1,007,439 - MPMX26_00959 0.12 -0.7 1,007,556 - MPMX26_00959 0.23 -0.2 1,007,559 - MPMX26_00959 0.23 +0.3 1,007,630 - MPMX26_00959 0.30 -0.6 1,007,630 - MPMX26_00959 0.30 +0.4 1,007,630 - MPMX26_00959 0.30 -0.2 1,007,630 - MPMX26_00959 0.30 +1.0 1,007,640 - MPMX26_00959 0.31 +0.2 1,007,646 - MPMX26_00959 0.31 +0.6 1,007,741 - MPMX26_00959 0.40 +0.1 1,007,741 - MPMX26_00959 0.40 -0.5 1,007,892 - MPMX26_00959 0.54 +0.7 1,007,901 - MPMX26_00959 0.54 -0.8 1,007,976 - MPMX26_00959 0.61 +1.1 1,008,006 - MPMX26_00959 0.64 -2.4 1,008,242 - MPMX26_00959 0.85 +1.1 1,008,882 - MPMX26_00960 0.17 -2.0 1,008,882 - MPMX26_00960 0.17 -1.2 1,008,906 - MPMX26_00960 0.18 -0.7 1,008,906 - MPMX26_00960 0.18 -0.2 1,008,906 - MPMX26_00960 0.18 +0.1 1,009,081 - MPMX26_00960 0.24 -0.7 1,009,164 - MPMX26_00960 0.27 -2.3 1,009,216 - MPMX26_00960 0.29 -1.2 1,009,216 - MPMX26_00960 0.29 +1.8 1,009,216 - MPMX26_00960 0.29 -1.0 1,009,218 - MPMX26_00960 0.29 +0.7 1,009,269 - MPMX26_00960 0.31 -0.7 1,009,355 - MPMX26_00960 0.35 -0.0 1,009,368 - MPMX26_00960 0.35 -0.9 1,009,449 - MPMX26_00960 0.38 -0.6 1,009,449 - MPMX26_00960 0.38 -3.4 1,009,518 - MPMX26_00960 0.41 +0.6 1,009,581 - MPMX26_00960 0.43 +0.3 1,009,654 - MPMX26_00960 0.46 -0.3 1,009,684 - MPMX26_00960 0.47 +0.8 1,009,684 - MPMX26_00960 0.47 +2.1 1,009,684 - MPMX26_00960 0.47 -2.0 1,009,692 - MPMX26_00960 0.47 +0.9 1,009,771 - MPMX26_00960 0.50 -1.5 1,009,816 - MPMX26_00960 0.52 +0.0 1,009,849 - MPMX26_00960 0.53 -1.6 1,009,849 - MPMX26_00960 0.53 +0.9 1,009,851 - MPMX26_00960 0.53 -0.3 1,009,851 - MPMX26_00960 0.53 +0.1 1,009,851 - MPMX26_00960 0.53 -0.8 1,009,954 - MPMX26_00960 0.57 -1.4 1,009,981 - MPMX26_00960 0.58 -0.2 1,010,046 - MPMX26_00960 0.60 -1.6 1,010,046 - MPMX26_00960 0.60 -1.2 1,010,046 - MPMX26_00960 0.60 +0.0 1,010,046 - MPMX26_00960 0.60 +0.2 1,010,091 - MPMX26_00960 0.62 +0.5 1,010,109 - MPMX26_00960 0.63 +0.2 1,010,157 - MPMX26_00960 0.64 +0.6 1,010,157 - MPMX26_00960 0.64 -1.0 1,010,167 - MPMX26_00960 0.65 -1.6 1,010,190 - MPMX26_00960 0.66 -0.2 1,010,190 - MPMX26_00960 0.66 -0.1 1,010,232 - MPMX26_00960 0.67 +1.7 1,010,232 - MPMX26_00960 0.67 +2.6 1,010,232 - MPMX26_00960 0.67 +1.3 1,010,232 - MPMX26_00960 0.67 -0.4 1,010,616 - MPMX26_00960 0.81 +0.5 1,010,616 - MPMX26_00960 0.81 -0.5 1,010,616 - MPMX26_00960 0.81 +0.3 1,010,629 - MPMX26_00960 0.82 -0.2 1,010,629 - MPMX26_00960 0.82 +1.2 1,010,812 - MPMX26_00960 0.89 +0.1 1,010,966 - +0.7 1,010,966 - +0.7 1,011,521 + -0.8 1,011,531 + -0.4 1,011,560 + +0.1 1,011,560 + +0.1 1,011,576 + MPMX26_00961 0.12 +0.4 1,011,621 + MPMX26_00961 0.18 +0.3 1,011,633 + MPMX26_00961 0.20 +0.4 1,011,700 + MPMX26_00961 0.30 -0.5 1,011,723 + MPMX26_00961 0.33 -0.1 1,011,723 + MPMX26_00961 0.33 +0.6 1,011,811 + MPMX26_00961 0.46 -0.1 1,011,900 + MPMX26_00961 0.59 +0.4 1,011,905 + MPMX26_00961 0.60 +0.9 1,011,933 + MPMX26_00961 0.64 +0.4 1,011,947 + MPMX26_00961 0.66 -0.2 1,012,023 + MPMX26_00961 0.77 +1.6 1,012,023 + MPMX26_00961 0.77 +0.3 1,012,023 + MPMX26_00961 0.77 +1.1 1,012,076 + MPMX26_00961 0.85 +0.1 1,012,076 + MPMX26_00961 0.85 +0.4 1,012,076 + MPMX26_00961 0.85 -0.1 1,012,076 + MPMX26_00961 0.85 -1.3 1,012,108 + MPMX26_00961 0.89 +0.4
Or see this region's nucleotide sequence