Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00572

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00571 and MPMX26_00572 are separated by 16 nucleotidesMPMX26_00572 and MPMX26_00573 are separated by 26 nucleotidesMPMX26_00573 and MPMX26_00574 are separated by 70 nucleotides MPMX26_00571: MPMX26_00571 - tRNA(Ile)-lysidine synthase, at 602,848 to 604,092 _00571 MPMX26_00572: MPMX26_00572 - Pyrroline-5-carboxylate reductase, at 604,109 to 604,939 _00572 MPMX26_00573: MPMX26_00573 - hypothetical protein, at 604,966 to 605,535 _00573 MPMX26_00574: MPMX26_00574 - DNA polymerase I, at 605,606 to 608,365 _00574 Position (kb) 604 605Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2 3at 603.678 kb on + strand, within MPMX26_00571at 604.063 kb on + strandat 604.081 kb on + strandat 604.100 kb on + strandat 604.100 kb on + strandat 604.111 kb on + strandat 604.141 kb on + strandat 604.160 kb on + strandat 604.165 kb on + strandat 604.166 kb on + strandat 604.187 kb on + strandat 604.209 kb on + strand, within MPMX26_00572at 604.209 kb on + strand, within MPMX26_00572at 604.237 kb on + strand, within MPMX26_00572at 604.282 kb on + strand, within MPMX26_00572at 604.302 kb on + strand, within MPMX26_00572at 604.336 kb on + strand, within MPMX26_00572at 604.337 kb on + strand, within MPMX26_00572at 604.342 kb on + strand, within MPMX26_00572at 604.342 kb on + strand, within MPMX26_00572at 604.342 kb on + strand, within MPMX26_00572at 604.342 kb on + strand, within MPMX26_00572at 604.342 kb on + strand, within MPMX26_00572at 604.347 kb on + strand, within MPMX26_00572at 604.349 kb on + strand, within MPMX26_00572at 604.367 kb on + strand, within MPMX26_00572at 604.367 kb on + strand, within MPMX26_00572at 604.406 kb on + strand, within MPMX26_00572at 604.414 kb on + strand, within MPMX26_00572at 604.430 kb on + strand, within MPMX26_00572at 604.435 kb on + strand, within MPMX26_00572at 604.435 kb on + strand, within MPMX26_00572at 604.435 kb on + strand, within MPMX26_00572at 604.435 kb on + strand, within MPMX26_00572at 604.435 kb on + strand, within MPMX26_00572at 604.435 kb on + strand, within MPMX26_00572at 604.465 kb on + strand, within MPMX26_00572at 604.483 kb on + strand, within MPMX26_00572at 604.483 kb on + strand, within MPMX26_00572at 604.483 kb on + strand, within MPMX26_00572at 604.483 kb on + strand, within MPMX26_00572at 604.483 kb on + strand, within MPMX26_00572at 604.483 kb on + strand, within MPMX26_00572at 604.489 kb on + strand, within MPMX26_00572at 604.491 kb on - strand, within MPMX26_00572at 604.505 kb on + strand, within MPMX26_00572at 604.515 kb on + strand, within MPMX26_00572at 604.520 kb on + strand, within MPMX26_00572at 604.551 kb on + strand, within MPMX26_00572at 604.572 kb on + strand, within MPMX26_00572at 604.572 kb on + strand, within MPMX26_00572at 604.585 kb on + strand, within MPMX26_00572at 604.585 kb on + strand, within MPMX26_00572at 604.585 kb on + strand, within MPMX26_00572at 604.585 kb on + strand, within MPMX26_00572at 604.593 kb on + strand, within MPMX26_00572at 604.598 kb on + strand, within MPMX26_00572at 604.603 kb on + strand, within MPMX26_00572at 604.603 kb on + strand, within MPMX26_00572at 604.611 kb on + strand, within MPMX26_00572at 604.624 kb on + strand, within MPMX26_00572at 604.624 kb on + strand, within MPMX26_00572at 604.624 kb on + strand, within MPMX26_00572at 604.624 kb on + strand, within MPMX26_00572at 604.624 kb on + strand, within MPMX26_00572at 604.624 kb on + strand, within MPMX26_00572at 604.624 kb on + strand, within MPMX26_00572at 604.629 kb on + strand, within MPMX26_00572at 604.630 kb on - strand, within MPMX26_00572at 604.665 kb on + strand, within MPMX26_00572at 604.665 kb on + strand, within MPMX26_00572at 604.670 kb on + strand, within MPMX26_00572at 604.733 kb on + strand, within MPMX26_00572at 604.733 kb on + strand, within MPMX26_00572at 604.733 kb on + strand, within MPMX26_00572at 604.733 kb on + strand, within MPMX26_00572at 604.733 kb on + strand, within MPMX26_00572at 604.733 kb on + strand, within MPMX26_00572at 604.733 kb on + strand, within MPMX26_00572at 604.740 kb on + strand, within MPMX26_00572at 604.740 kb on + strand, within MPMX26_00572at 604.773 kb on - strand, within MPMX26_00572at 604.776 kb on + strand, within MPMX26_00572at 604.803 kb on + strand, within MPMX26_00572at 604.810 kb on + strand, within MPMX26_00572at 604.812 kb on + strand, within MPMX26_00572at 604.812 kb on + strand, within MPMX26_00572at 604.812 kb on + strand, within MPMX26_00572at 604.812 kb on + strand, within MPMX26_00572at 604.845 kb on + strand, within MPMX26_00572at 604.870 kb on + strandat 604.874 kb on + strandat 604.874 kb on + strandat 604.899 kb on + strandat 604.911 kb on + strandat 604.969 kb on + strandat 604.999 kb on + strandat 605.088 kb on + strand, within MPMX26_00573at 605.088 kb on + strand, within MPMX26_00573at 605.093 kb on + strand, within MPMX26_00573at 605.105 kb on + strand, within MPMX26_00573at 605.105 kb on + strand, within MPMX26_00573at 605.113 kb on + strand, within MPMX26_00573at 605.120 kb on + strand, within MPMX26_00573at 605.120 kb on + strand, within MPMX26_00573at 605.120 kb on + strand, within MPMX26_00573at 605.150 kb on + strand, within MPMX26_00573at 605.165 kb on + strand, within MPMX26_00573at 605.219 kb on + strand, within MPMX26_00573at 605.220 kb on + strand, within MPMX26_00573at 605.220 kb on + strand, within MPMX26_00573at 605.220 kb on + strand, within MPMX26_00573at 605.220 kb on + strand, within MPMX26_00573at 605.220 kb on + strand, within MPMX26_00573at 605.220 kb on + strand, within MPMX26_00573at 605.225 kb on + strand, within MPMX26_00573at 605.225 kb on + strand, within MPMX26_00573at 605.235 kb on + strand, within MPMX26_00573at 605.235 kb on + strand, within MPMX26_00573at 605.240 kb on + strand, within MPMX26_00573at 605.240 kb on + strand, within MPMX26_00573at 605.326 kb on + strand, within MPMX26_00573at 605.326 kb on + strand, within MPMX26_00573at 605.326 kb on + strand, within MPMX26_00573at 605.336 kb on + strand, within MPMX26_00573at 605.340 kb on + strand, within MPMX26_00573at 605.345 kb on + strand, within MPMX26_00573at 605.345 kb on + strand, within MPMX26_00573at 605.358 kb on + strand, within MPMX26_00573at 605.369 kb on + strand, within MPMX26_00573at 605.391 kb on + strand, within MPMX26_00573at 605.398 kb on + strand, within MPMX26_00573at 605.398 kb on + strand, within MPMX26_00573at 605.441 kb on + strand, within MPMX26_00573at 605.441 kb on + strand, within MPMX26_00573at 605.441 kb on + strand, within MPMX26_00573at 605.441 kb on + strand, within MPMX26_00573at 605.451 kb on + strand, within MPMX26_00573at 605.451 kb on + strand, within MPMX26_00573at 605.475 kb on + strand, within MPMX26_00573at 605.475 kb on + strand, within MPMX26_00573at 605.607 kb on - strandat 605.617 kb on - strandat 605.632 kb on - strandat 605.632 kb on - strandat 605.632 kb on - strandat 605.632 kb on - strandat 605.632 kb on - strandat 605.632 kb on - strandat 605.648 kb on - strandat 605.657 kb on - strandat 605.848 kb on - strandat 605.848 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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603,678 + MPMX26_00571 0.67 -2.3
604,063 + +0.5
604,081 + +0.9
604,100 + +1.1
604,100 + -2.0
604,111 + -3.3
604,141 + -3.3
604,160 + -1.6
604,165 + -1.5
604,166 + -2.5
604,187 + -4.9
604,209 + MPMX26_00572 0.12 -5.4
604,209 + MPMX26_00572 0.12 -5.1
604,237 + MPMX26_00572 0.15 -2.9
604,282 + MPMX26_00572 0.21 -4.8
604,302 + MPMX26_00572 0.23 -4.7
604,336 + MPMX26_00572 0.27 -4.3
604,337 + MPMX26_00572 0.27 -3.6
604,342 + MPMX26_00572 0.28 -5.4
604,342 + MPMX26_00572 0.28 -3.9
604,342 + MPMX26_00572 0.28 -4.2
604,342 + MPMX26_00572 0.28 -4.4
604,342 + MPMX26_00572 0.28 -3.1
604,347 + MPMX26_00572 0.29 -3.7
604,349 + MPMX26_00572 0.29 -3.9
604,367 + MPMX26_00572 0.31 -2.8
604,367 + MPMX26_00572 0.31 -2.2
604,406 + MPMX26_00572 0.36 -3.4
604,414 + MPMX26_00572 0.37 -3.9
604,430 + MPMX26_00572 0.39 -5.7
604,435 + MPMX26_00572 0.39 -5.0
604,435 + MPMX26_00572 0.39 -4.7
604,435 + MPMX26_00572 0.39 -2.9
604,435 + MPMX26_00572 0.39 -2.6
604,435 + MPMX26_00572 0.39 -4.7
604,435 + MPMX26_00572 0.39 -3.8
604,465 + MPMX26_00572 0.43 -3.4
604,483 + MPMX26_00572 0.45 -5.1
604,483 + MPMX26_00572 0.45 -5.9
604,483 + MPMX26_00572 0.45 -3.1
604,483 + MPMX26_00572 0.45 -4.8
604,483 + MPMX26_00572 0.45 -4.2
604,483 + MPMX26_00572 0.45 -2.1
604,489 + MPMX26_00572 0.46 -3.5
604,491 - MPMX26_00572 0.46 -1.6
604,505 + MPMX26_00572 0.48 -4.2
604,515 + MPMX26_00572 0.49 -4.1
604,520 + MPMX26_00572 0.49 -2.1
604,551 + MPMX26_00572 0.53 -3.4
604,572 + MPMX26_00572 0.56 -3.6
604,572 + MPMX26_00572 0.56 -3.7
604,585 + MPMX26_00572 0.57 -3.9
604,585 + MPMX26_00572 0.57 -3.8
604,585 + MPMX26_00572 0.57 -4.7
604,585 + MPMX26_00572 0.57 -4.5
604,593 + MPMX26_00572 0.58 -2.8
604,598 + MPMX26_00572 0.59 -3.9
604,603 + MPMX26_00572 0.59 -4.2
604,603 + MPMX26_00572 0.59 -2.3
604,611 + MPMX26_00572 0.60 -5.1
604,624 + MPMX26_00572 0.62 -3.3
604,624 + MPMX26_00572 0.62 -5.2
604,624 + MPMX26_00572 0.62 -4.4
604,624 + MPMX26_00572 0.62 -3.2
604,624 + MPMX26_00572 0.62 -4.6
604,624 + MPMX26_00572 0.62 -2.3
604,624 + MPMX26_00572 0.62 -3.6
604,629 + MPMX26_00572 0.63 -4.3
604,630 - MPMX26_00572 0.63 -1.1
604,665 + MPMX26_00572 0.67 -3.2
604,665 + MPMX26_00572 0.67 -3.3
604,670 + MPMX26_00572 0.68 -4.0
604,733 + MPMX26_00572 0.75 -1.6
604,733 + MPMX26_00572 0.75 -3.7
604,733 + MPMX26_00572 0.75 -5.3
604,733 + MPMX26_00572 0.75 -4.5
604,733 + MPMX26_00572 0.75 -2.5
604,733 + MPMX26_00572 0.75 -3.7
604,733 + MPMX26_00572 0.75 -4.7
604,740 + MPMX26_00572 0.76 -4.0
604,740 + MPMX26_00572 0.76 -3.4
604,773 - MPMX26_00572 0.80 -3.3
604,776 + MPMX26_00572 0.80 -4.8
604,803 + MPMX26_00572 0.84 -3.9
604,810 + MPMX26_00572 0.84 -4.2
604,812 + MPMX26_00572 0.85 -3.7
604,812 + MPMX26_00572 0.85 -5.0
604,812 + MPMX26_00572 0.85 -0.9
604,812 + MPMX26_00572 0.85 -5.5
604,845 + MPMX26_00572 0.89 -3.6
604,870 + -4.1
604,874 + -5.0
604,874 + -3.4
604,899 + -4.3
604,911 + +0.5
604,969 + +3.0
604,999 + +2.7
605,088 + MPMX26_00573 0.21 +2.9
605,088 + MPMX26_00573 0.21 +2.6
605,093 + MPMX26_00573 0.22 +2.0
605,105 + MPMX26_00573 0.24 +3.2
605,105 + MPMX26_00573 0.24 +2.9
605,113 + MPMX26_00573 0.26 +2.6
605,120 + MPMX26_00573 0.27 +1.9
605,120 + MPMX26_00573 0.27 +2.7
605,120 + MPMX26_00573 0.27 +2.2
605,150 + MPMX26_00573 0.32 +3.2
605,165 + MPMX26_00573 0.35 +2.5
605,219 + MPMX26_00573 0.44 +2.7
605,220 + MPMX26_00573 0.45 +2.5
605,220 + MPMX26_00573 0.45 +2.4
605,220 + MPMX26_00573 0.45 +2.8
605,220 + MPMX26_00573 0.45 +2.9
605,220 + MPMX26_00573 0.45 +2.4
605,220 + MPMX26_00573 0.45 +2.5
605,225 + MPMX26_00573 0.45 +3.3
605,225 + MPMX26_00573 0.45 +3.5
605,235 + MPMX26_00573 0.47 +2.9
605,235 + MPMX26_00573 0.47 +2.4
605,240 + MPMX26_00573 0.48 +2.6
605,240 + MPMX26_00573 0.48 +2.5
605,326 + MPMX26_00573 0.63 +1.1
605,326 + MPMX26_00573 0.63 +3.0
605,326 + MPMX26_00573 0.63 +2.7
605,336 + MPMX26_00573 0.65 +2.5
605,340 + MPMX26_00573 0.66 +2.5
605,345 + MPMX26_00573 0.66 +2.6
605,345 + MPMX26_00573 0.66 +2.5
605,358 + MPMX26_00573 0.69 +2.3
605,369 + MPMX26_00573 0.71 +2.7
605,391 + MPMX26_00573 0.75 +2.7
605,398 + MPMX26_00573 0.76 +3.0
605,398 + MPMX26_00573 0.76 +1.3
605,441 + MPMX26_00573 0.83 +2.8
605,441 + MPMX26_00573 0.83 +2.8
605,441 + MPMX26_00573 0.83 +2.7
605,441 + MPMX26_00573 0.83 +2.5
605,451 + MPMX26_00573 0.85 +2.6
605,451 + MPMX26_00573 0.85 +2.7
605,475 + MPMX26_00573 0.89 +3.5
605,475 + MPMX26_00573 0.89 +3.3
605,607 - -0.7
605,617 - +0.6
605,632 - -0.3
605,632 - -0.1
605,632 - +0.4
605,632 - -0.3
605,632 - -1.1
605,632 - +0.2
605,648 - +0.5
605,657 - +0.7
605,848 - +0.1
605,848 - -1.1

Or see this region's nucleotide sequence