Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00523

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00521 and MPMX26_00522 are separated by 36 nucleotidesMPMX26_00522 and MPMX26_00523 overlap by 4 nucleotidesMPMX26_00523 and MPMX26_00524 are separated by 533 nucleotides MPMX26_00521: MPMX26_00521 - hypothetical protein, at 552,266 to 553,321 _00521 MPMX26_00522: MPMX26_00522 - hypothetical protein, at 553,358 to 553,609 _00522 MPMX26_00523: MPMX26_00523 - hypothetical protein, at 553,606 to 554,385 _00523 MPMX26_00524: MPMX26_00524 - hypothetical protein, at 554,919 to 555,563 _00524 Position (kb) 553 554 555Strain fitness (log2 ratio) -1 0 1at 552.926 kb on + strand, within MPMX26_00521at 553.922 kb on - strand, within MPMX26_00523at 554.423 kb on - strandat 554.685 kb on - strandat 554.685 kb on - strandat 554.685 kb on - strandat 554.685 kb on - strandat 555.338 kb on - strand, within MPMX26_00524

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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552,926 + MPMX26_00521 0.62 -1.5
553,922 - MPMX26_00523 0.41 -1.4
554,423 - +1.4
554,685 - +0.7
554,685 - +0.8
554,685 - +0.7
554,685 - +1.1
555,338 - MPMX26_00524 0.65 -1.3

Or see this region's nucleotide sequence