Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00399

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00396 and MPMX26_00397 overlap by 4 nucleotidesMPMX26_00397 and MPMX26_00398 are separated by 10 nucleotidesMPMX26_00398 and MPMX26_00399 are separated by 152 nucleotidesMPMX26_00399 and MPMX26_00400 are separated by 58 nucleotidesMPMX26_00400 and MPMX26_00401 are separated by 110 nucleotides MPMX26_00396: MPMX26_00396 - Sec-independent protein translocase protein TatC, at 424,443 to 425,225 _00396 MPMX26_00397: MPMX26_00397 - Sec-independent protein translocase protein TatB, at 425,222 to 425,683 _00397 MPMX26_00398: MPMX26_00398 - Sec-independent protein translocase protein TatA, at 425,694 to 425,918 _00398 MPMX26_00399: MPMX26_00399 - hypothetical protein, at 426,071 to 426,946 _00399 MPMX26_00400: MPMX26_00400 - dITP/XTP pyrophosphatase, at 427,005 to 427,637 _00400 MPMX26_00401: MPMX26_00401 - hypothetical protein, at 427,748 to 428,338 _00401 Position (kb) 426 427Strain fitness (log2 ratio) -1 0 1 2at 426.079 kb on + strandat 426.118 kb on + strandat 426.118 kb on + strandat 426.118 kb on + strandat 426.166 kb on + strand, within MPMX26_00399at 426.433 kb on + strand, within MPMX26_00399at 426.722 kb on + strand, within MPMX26_00399at 426.723 kb on - strand, within MPMX26_00399at 426.773 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.786 kb on - strand, within MPMX26_00399at 426.881 kb on + strandat 427.096 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.106 kb on - strand, within MPMX26_00400at 427.112 kb on - strand, within MPMX26_00400at 427.112 kb on - strand, within MPMX26_00400at 427.125 kb on - strand, within MPMX26_00400at 427.125 kb on - strand, within MPMX26_00400at 427.130 kb on - strand, within MPMX26_00400at 427.130 kb on - strand, within MPMX26_00400at 427.130 kb on - strand, within MPMX26_00400at 427.130 kb on - strand, within MPMX26_00400at 427.151 kb on - strand, within MPMX26_00400at 427.151 kb on - strand, within MPMX26_00400at 427.151 kb on - strand, within MPMX26_00400at 427.241 kb on - strand, within MPMX26_00400at 427.241 kb on - strand, within MPMX26_00400at 427.253 kb on - strand, within MPMX26_00400at 427.253 kb on - strand, within MPMX26_00400at 427.481 kb on - strand, within MPMX26_00400at 427.481 kb on - strand, within MPMX26_00400at 427.481 kb on - strand, within MPMX26_00400at 427.481 kb on - strand, within MPMX26_00400at 427.538 kb on - strand, within MPMX26_00400at 427.806 kb on - strandat 427.812 kb on - strand, within MPMX26_00401at 427.812 kb on - strand, within MPMX26_00401at 427.818 kb on - strand, within MPMX26_00401at 427.818 kb on - strand, within MPMX26_00401at 427.827 kb on - strand, within MPMX26_00401at 427.872 kb on - strand, within MPMX26_00401at 427.882 kb on - strand, within MPMX26_00401at 427.886 kb on - strand, within MPMX26_00401at 427.888 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.908 kb on - strand, within MPMX26_00401at 427.908 kb on - strand, within MPMX26_00401at 427.914 kb on - strand, within MPMX26_00401at 427.916 kb on - strand, within MPMX26_00401at 427.916 kb on - strand, within MPMX26_00401at 427.938 kb on - strand, within MPMX26_00401

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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426,079 + +0.3
426,118 + -0.1
426,118 + +0.8
426,118 + -1.0
426,166 + MPMX26_00399 0.11 -0.4
426,433 + MPMX26_00399 0.41 -0.4
426,722 + MPMX26_00399 0.74 +0.5
426,723 - MPMX26_00399 0.74 +0.5
426,773 + MPMX26_00399 0.80 -0.4
426,778 + MPMX26_00399 0.81 -0.4
426,778 + MPMX26_00399 0.81 -1.5
426,778 + MPMX26_00399 0.81 -0.4
426,778 + MPMX26_00399 0.81 -1.5
426,778 + MPMX26_00399 0.81 -0.1
426,786 - MPMX26_00399 0.82 +0.5
426,881 + +0.6
427,096 - MPMX26_00400 0.14 +0.1
427,101 - MPMX26_00400 0.15 +0.2
427,101 - MPMX26_00400 0.15 +1.1
427,101 - MPMX26_00400 0.15 -0.1
427,101 - MPMX26_00400 0.15 +0.1
427,101 - MPMX26_00400 0.15 -1.1
427,101 - MPMX26_00400 0.15 +0.7
427,101 - MPMX26_00400 0.15 -0.6
427,101 - MPMX26_00400 0.15 -1.7
427,101 - MPMX26_00400 0.15 -0.1
427,101 - MPMX26_00400 0.15 +0.4
427,101 - MPMX26_00400 0.15 +0.1
427,101 - MPMX26_00400 0.15 +0.3
427,101 - MPMX26_00400 0.15 -0.4
427,101 - MPMX26_00400 0.15 -0.5
427,101 - MPMX26_00400 0.15 -0.3
427,101 - MPMX26_00400 0.15 +0.1
427,101 - MPMX26_00400 0.15 -0.2
427,106 - MPMX26_00400 0.16 +0.5
427,112 - MPMX26_00400 0.17 +1.7
427,112 - MPMX26_00400 0.17 +0.1
427,125 - MPMX26_00400 0.19 -0.0
427,125 - MPMX26_00400 0.19 -0.1
427,130 - MPMX26_00400 0.20 -0.3
427,130 - MPMX26_00400 0.20 -1.5
427,130 - MPMX26_00400 0.20 -0.3
427,130 - MPMX26_00400 0.20 +0.0
427,151 - MPMX26_00400 0.23 +0.3
427,151 - MPMX26_00400 0.23 +0.2
427,151 - MPMX26_00400 0.23 +0.3
427,241 - MPMX26_00400 0.37 +0.5
427,241 - MPMX26_00400 0.37 -0.5
427,253 - MPMX26_00400 0.39 +1.1
427,253 - MPMX26_00400 0.39 +0.2
427,481 - MPMX26_00400 0.75 +0.5
427,481 - MPMX26_00400 0.75 +0.8
427,481 - MPMX26_00400 0.75 -0.8
427,481 - MPMX26_00400 0.75 +0.3
427,538 - MPMX26_00400 0.84 -1.1
427,806 - +1.7
427,812 - MPMX26_00401 0.11 +1.0
427,812 - MPMX26_00401 0.11 +2.2
427,818 - MPMX26_00401 0.12 +1.6
427,818 - MPMX26_00401 0.12 +2.1
427,827 - MPMX26_00401 0.13 +2.1
427,872 - MPMX26_00401 0.21 +1.6
427,882 - MPMX26_00401 0.23 +1.8
427,886 - MPMX26_00401 0.23 +2.4
427,888 - MPMX26_00401 0.24 +1.5
427,896 - MPMX26_00401 0.25 +1.4
427,896 - MPMX26_00401 0.25 +1.1
427,896 - MPMX26_00401 0.25 +2.4
427,896 - MPMX26_00401 0.25 +1.3
427,896 - MPMX26_00401 0.25 +1.6
427,896 - MPMX26_00401 0.25 +1.6
427,896 - MPMX26_00401 0.25 +1.3
427,896 - MPMX26_00401 0.25 +0.9
427,896 - MPMX26_00401 0.25 +1.4
427,896 - MPMX26_00401 0.25 +1.1
427,908 - MPMX26_00401 0.27 +2.1
427,908 - MPMX26_00401 0.27 +2.4
427,914 - MPMX26_00401 0.28 +2.1
427,916 - MPMX26_00401 0.28 +1.6
427,916 - MPMX26_00401 0.28 +0.9
427,938 - MPMX26_00401 0.32 +2.1

Or see this region's nucleotide sequence