Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00331 and MPMX26_00332 are separated by 12 nucleotides MPMX26_00332 and MPMX26_00333 are separated by 96 nucleotides
MPMX26_00331: MPMX26_00331 - 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase, at 359,578 to 360,537
_00331
MPMX26_00332: MPMX26_00332 - 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component, at 360,550 to 361,773
_00332
MPMX26_00333: MPMX26_00333 - hypothetical protein, at 361,870 to 362,796
_00333
Position (kb) 360
361
362 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 359.600 kb on - strand at 359.632 kb on + strand at 360.266 kb on - strand, within MPMX26_00331 at 360.418 kb on + strand, within MPMX26_00331 at 360.439 kb on + strand, within MPMX26_00331 at 360.557 kb on - strand at 360.764 kb on + strand, within MPMX26_00332 at 360.814 kb on + strand, within MPMX26_00332 at 360.858 kb on + strand, within MPMX26_00332 at 361.081 kb on + strand, within MPMX26_00332 at 361.105 kb on + strand, within MPMX26_00332 at 361.105 kb on + strand, within MPMX26_00332 at 361.105 kb on + strand, within MPMX26_00332 at 361.138 kb on + strand, within MPMX26_00332 at 361.249 kb on + strand, within MPMX26_00332 at 361.295 kb on + strand, within MPMX26_00332 at 361.346 kb on - strand, within MPMX26_00332 at 361.384 kb on + strand, within MPMX26_00332 at 361.384 kb on + strand, within MPMX26_00332 at 361.407 kb on + strand, within MPMX26_00332 at 361.506 kb on + strand, within MPMX26_00332 at 361.506 kb on + strand, within MPMX26_00332 at 361.511 kb on + strand, within MPMX26_00332 at 361.511 kb on + strand, within MPMX26_00332 at 361.580 kb on + strand, within MPMX26_00332 at 361.623 kb on + strand, within MPMX26_00332 at 361.678 kb on + strand at 361.735 kb on + strand at 361.735 kb on + strand at 361.758 kb on + strand at 361.939 kb on + strand at 362.378 kb on + strand, within MPMX26_00333 at 362.567 kb on + strand, within MPMX26_00333
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 359,600 - +1.1 359,632 + +0.2 360,266 - MPMX26_00331 0.72 +0.9 360,418 + MPMX26_00331 0.88 +0.9 360,439 + MPMX26_00331 0.90 +1.0 360,557 - +0.2 360,764 + MPMX26_00332 0.17 +0.2 360,814 + MPMX26_00332 0.22 -0.6 360,858 + MPMX26_00332 0.25 -3.4 361,081 + MPMX26_00332 0.43 -0.1 361,105 + MPMX26_00332 0.45 +1.0 361,105 + MPMX26_00332 0.45 -2.3 361,105 + MPMX26_00332 0.45 +0.3 361,138 + MPMX26_00332 0.48 -0.7 361,249 + MPMX26_00332 0.57 -0.7 361,295 + MPMX26_00332 0.61 +0.3 361,346 - MPMX26_00332 0.65 -0.7 361,384 + MPMX26_00332 0.68 -2.5 361,384 + MPMX26_00332 0.68 -0.7 361,407 + MPMX26_00332 0.70 -2.0 361,506 + MPMX26_00332 0.78 +0.3 361,506 + MPMX26_00332 0.78 +0.5 361,511 + MPMX26_00332 0.79 -0.2 361,511 + MPMX26_00332 0.79 +0.0 361,580 + MPMX26_00332 0.84 -2.3 361,623 + MPMX26_00332 0.88 +0.5 361,678 + +0.6 361,735 + -1.1 361,735 + +0.9 361,758 + +0.6 361,939 + -0.4 362,378 + MPMX26_00333 0.55 +0.5 362,567 + MPMX26_00333 0.75 -1.2
Or see this region's nucleotide sequence