Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00219

Experiment: Ethanolamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00218 and MPMX26_00219 are separated by 352 nucleotidesMPMX26_00219 and MPMX26_00220 are separated by 219 nucleotidesMPMX26_00220 and MPMX26_00221 are separated by 306 nucleotides MPMX26_00218: MPMX26_00218 - Chaperone protein HtpG, at 233,721 to 235,643 _00218 MPMX26_00219: MPMX26_00219 - hypothetical protein, at 235,996 to 237,186 _00219 MPMX26_00220: MPMX26_00220 - hypothetical protein, at 237,406 to 237,735 _00220 MPMX26_00221: MPMX26_00221 - hypothetical protein, at 238,042 to 238,473 _00221 Position (kb) 235 236 237 238Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 235.007 kb on + strand, within MPMX26_00218at 235.074 kb on + strand, within MPMX26_00218at 235.078 kb on + strand, within MPMX26_00218at 235.148 kb on + strand, within MPMX26_00218at 235.153 kb on + strand, within MPMX26_00218at 235.176 kb on + strand, within MPMX26_00218at 235.176 kb on + strand, within MPMX26_00218at 235.176 kb on + strand, within MPMX26_00218at 235.176 kb on + strand, within MPMX26_00218at 235.176 kb on + strand, within MPMX26_00218at 235.196 kb on + strand, within MPMX26_00218at 235.196 kb on + strand, within MPMX26_00218at 235.201 kb on + strand, within MPMX26_00218at 235.217 kb on + strand, within MPMX26_00218at 235.223 kb on + strand, within MPMX26_00218at 235.231 kb on + strand, within MPMX26_00218at 235.233 kb on + strand, within MPMX26_00218at 235.238 kb on + strand, within MPMX26_00218at 235.268 kb on + strand, within MPMX26_00218at 235.276 kb on + strand, within MPMX26_00218at 235.298 kb on + strand, within MPMX26_00218at 235.298 kb on + strand, within MPMX26_00218at 235.299 kb on + strand, within MPMX26_00218at 235.322 kb on + strand, within MPMX26_00218at 235.345 kb on + strand, within MPMX26_00218at 235.355 kb on + strand, within MPMX26_00218at 235.390 kb on + strand, within MPMX26_00218at 235.401 kb on + strand, within MPMX26_00218at 235.424 kb on + strand, within MPMX26_00218at 235.449 kb on + strand, within MPMX26_00218at 235.449 kb on + strand, within MPMX26_00218at 235.449 kb on + strand, within MPMX26_00218at 235.449 kb on + strand, within MPMX26_00218at 235.454 kb on + strandat 235.454 kb on + strandat 235.454 kb on + strandat 235.454 kb on + strandat 235.458 kb on + strandat 235.458 kb on + strandat 235.458 kb on + strandat 235.466 kb on + strandat 235.484 kb on + strandat 235.522 kb on + strandat 235.565 kb on + strandat 235.565 kb on + strandat 235.565 kb on + strandat 235.578 kb on + strandat 235.598 kb on + strandat 235.609 kb on + strandat 235.627 kb on + strandat 235.729 kb on - strandat 235.807 kb on - strandat 235.922 kb on - strandat 235.924 kb on - strandat 235.927 kb on - strandat 235.927 kb on - strandat 235.927 kb on - strandat 235.955 kb on - strandat 235.955 kb on - strandat 235.957 kb on - strandat 235.957 kb on - strandat 235.958 kb on - strandat 235.958 kb on - strandat 235.958 kb on - strandat 236.025 kb on - strandat 236.025 kb on - strandat 236.025 kb on - strandat 236.032 kb on - strandat 236.032 kb on - strandat 236.052 kb on - strandat 236.092 kb on - strandat 236.092 kb on - strandat 236.097 kb on - strandat 236.191 kb on - strand, within MPMX26_00219at 236.220 kb on - strand, within MPMX26_00219at 236.220 kb on - strand, within MPMX26_00219at 236.220 kb on - strand, within MPMX26_00219at 236.233 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.278 kb on - strand, within MPMX26_00219at 236.320 kb on - strand, within MPMX26_00219at 236.320 kb on - strand, within MPMX26_00219at 236.325 kb on - strand, within MPMX26_00219at 236.325 kb on - strand, within MPMX26_00219at 236.367 kb on - strand, within MPMX26_00219at 236.367 kb on - strand, within MPMX26_00219at 236.367 kb on - strand, within MPMX26_00219at 236.367 kb on - strand, within MPMX26_00219at 236.385 kb on - strand, within MPMX26_00219at 236.431 kb on - strand, within MPMX26_00219at 236.437 kb on - strand, within MPMX26_00219at 236.437 kb on - strand, within MPMX26_00219at 236.437 kb on - strand, within MPMX26_00219at 236.437 kb on - strand, within MPMX26_00219at 236.457 kb on - strand, within MPMX26_00219at 236.457 kb on - strand, within MPMX26_00219at 236.457 kb on - strand, within MPMX26_00219at 236.475 kb on - strand, within MPMX26_00219at 236.500 kb on - strand, within MPMX26_00219at 236.526 kb on - strand, within MPMX26_00219at 236.554 kb on - strand, within MPMX26_00219at 236.575 kb on - strand, within MPMX26_00219at 236.647 kb on - strand, within MPMX26_00219at 236.711 kb on - strand, within MPMX26_00219at 236.732 kb on - strand, within MPMX26_00219at 236.765 kb on - strand, within MPMX26_00219at 236.776 kb on + strand, within MPMX26_00219at 236.784 kb on - strand, within MPMX26_00219at 236.784 kb on - strand, within MPMX26_00219at 236.784 kb on - strand, within MPMX26_00219at 236.910 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.928 kb on - strand, within MPMX26_00219at 236.964 kb on - strand, within MPMX26_00219at 236.965 kb on - strand, within MPMX26_00219at 236.983 kb on - strand, within MPMX26_00219at 236.983 kb on - strand, within MPMX26_00219at 236.983 kb on - strand, within MPMX26_00219at 236.991 kb on - strand, within MPMX26_00219at 237.000 kb on - strand, within MPMX26_00219at 237.081 kb on - strandat 237.081 kb on - strandat 237.093 kb on - strandat 237.093 kb on - strandat 237.114 kb on - strandat 237.114 kb on - strandat 237.509 kb on - strand, within MPMX26_00220at 237.540 kb on - strand, within MPMX26_00220at 237.540 kb on - strand, within MPMX26_00220at 237.540 kb on - strand, within MPMX26_00220at 237.576 kb on - strand, within MPMX26_00220at 237.583 kb on - strand, within MPMX26_00220at 237.583 kb on - strand, within MPMX26_00220at 237.583 kb on - strand, within MPMX26_00220at 237.584 kb on - strand, within MPMX26_00220at 237.584 kb on - strand, within MPMX26_00220at 237.584 kb on - strand, within MPMX26_00220at 237.612 kb on - strand, within MPMX26_00220at 237.649 kb on - strand, within MPMX26_00220at 237.649 kb on - strand, within MPMX26_00220at 237.649 kb on - strand, within MPMX26_00220at 237.649 kb on - strand, within MPMX26_00220at 237.663 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.682 kb on - strand, within MPMX26_00220at 237.687 kb on - strand, within MPMX26_00220at 237.767 kb on + strandat 237.773 kb on - strandat 237.775 kb on - strandat 238.140 kb on - strand, within MPMX26_00221at 238.150 kb on - strand, within MPMX26_00221at 238.152 kb on - strand, within MPMX26_00221at 238.152 kb on - strand, within MPMX26_00221at 238.162 kb on - strand, within MPMX26_00221at 238.162 kb on - strand, within MPMX26_00221at 238.170 kb on - strand, within MPMX26_00221at 238.176 kb on - strand, within MPMX26_00221at 238.177 kb on - strand, within MPMX26_00221

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Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
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235,007 + MPMX26_00218 0.67 +0.4
235,074 + MPMX26_00218 0.70 -0.2
235,078 + MPMX26_00218 0.71 +0.5
235,148 + MPMX26_00218 0.74 +0.1
235,153 + MPMX26_00218 0.74 +0.3
235,176 + MPMX26_00218 0.76 +0.3
235,176 + MPMX26_00218 0.76 +0.4
235,176 + MPMX26_00218 0.76 -0.0
235,176 + MPMX26_00218 0.76 +0.5
235,176 + MPMX26_00218 0.76 -0.4
235,196 + MPMX26_00218 0.77 +0.2
235,196 + MPMX26_00218 0.77 +0.4
235,201 + MPMX26_00218 0.77 -0.5
235,217 + MPMX26_00218 0.78 -0.0
235,223 + MPMX26_00218 0.78 +0.1
235,231 + MPMX26_00218 0.79 -0.6
235,233 + MPMX26_00218 0.79 -0.4
235,238 + MPMX26_00218 0.79 -0.1
235,268 + MPMX26_00218 0.80 -0.2
235,276 + MPMX26_00218 0.81 -0.1
235,298 + MPMX26_00218 0.82 -0.1
235,298 + MPMX26_00218 0.82 +0.3
235,299 + MPMX26_00218 0.82 +0.5
235,322 + MPMX26_00218 0.83 -0.4
235,345 + MPMX26_00218 0.84 -0.2
235,355 + MPMX26_00218 0.85 +0.6
235,390 + MPMX26_00218 0.87 +0.7
235,401 + MPMX26_00218 0.87 +0.6
235,424 + MPMX26_00218 0.89 +0.2
235,449 + MPMX26_00218 0.90 +0.6
235,449 + MPMX26_00218 0.90 -0.0
235,449 + MPMX26_00218 0.90 +0.2
235,449 + MPMX26_00218 0.90 +0.8
235,454 + +0.4
235,454 + +0.4
235,454 + -0.1
235,454 + -0.1
235,458 + +0.2
235,458 + -0.7
235,458 + +0.2
235,466 + +0.7
235,484 + -0.0
235,522 + +0.7
235,565 + -0.2
235,565 + +0.0
235,565 + +0.9
235,578 + +0.2
235,598 + +0.6
235,609 + -0.0
235,627 + -0.0
235,729 - +1.0
235,807 - +1.4
235,922 - -1.0
235,924 - +1.7
235,927 - -0.1
235,927 - -2.5
235,927 - -2.5
235,955 - -0.2
235,955 - -1.3
235,957 - -0.1
235,957 - +1.7
235,958 - -0.3
235,958 - +0.4
235,958 - +0.2
236,025 - +0.3
236,025 - -1.7
236,025 - +0.4
236,032 - +0.1
236,032 - -0.3
236,052 - +0.2
236,092 - +0.6
236,092 - +0.2
236,097 - -0.4
236,191 - MPMX26_00219 0.16 -0.4
236,220 - MPMX26_00219 0.19 +0.7
236,220 - MPMX26_00219 0.19 +0.8
236,220 - MPMX26_00219 0.19 -1.1
236,233 - MPMX26_00219 0.20 +0.4
236,278 - MPMX26_00219 0.24 +0.1
236,278 - MPMX26_00219 0.24 +0.4
236,278 - MPMX26_00219 0.24 +0.9
236,278 - MPMX26_00219 0.24 -2.7
236,278 - MPMX26_00219 0.24 -0.1
236,278 - MPMX26_00219 0.24 +0.1
236,278 - MPMX26_00219 0.24 -0.3
236,278 - MPMX26_00219 0.24 +0.6
236,278 - MPMX26_00219 0.24 +0.4
236,278 - MPMX26_00219 0.24 -0.2
236,320 - MPMX26_00219 0.27 +1.0
236,320 - MPMX26_00219 0.27 +0.4
236,325 - MPMX26_00219 0.28 +0.5
236,325 - MPMX26_00219 0.28 -0.1
236,367 - MPMX26_00219 0.31 +1.1
236,367 - MPMX26_00219 0.31 +1.1
236,367 - MPMX26_00219 0.31 -0.1
236,367 - MPMX26_00219 0.31 +0.3
236,385 - MPMX26_00219 0.33 +1.0
236,431 - MPMX26_00219 0.37 +0.4
236,437 - MPMX26_00219 0.37 +0.3
236,437 - MPMX26_00219 0.37 +0.2
236,437 - MPMX26_00219 0.37 -0.1
236,437 - MPMX26_00219 0.37 -0.2
236,457 - MPMX26_00219 0.39 +0.6
236,457 - MPMX26_00219 0.39 +0.5
236,457 - MPMX26_00219 0.39 -0.3
236,475 - MPMX26_00219 0.40 +0.5
236,500 - MPMX26_00219 0.42 +0.2
236,526 - MPMX26_00219 0.45 -2.4
236,554 - MPMX26_00219 0.47 -1.3
236,575 - MPMX26_00219 0.49 -0.3
236,647 - MPMX26_00219 0.55 -2.6
236,711 - MPMX26_00219 0.60 +0.4
236,732 - MPMX26_00219 0.62 -0.3
236,765 - MPMX26_00219 0.65 +0.8
236,776 + MPMX26_00219 0.65 -1.0
236,784 - MPMX26_00219 0.66 -0.0
236,784 - MPMX26_00219 0.66 +0.1
236,784 - MPMX26_00219 0.66 -0.1
236,910 - MPMX26_00219 0.77 +0.5
236,928 - MPMX26_00219 0.78 +0.4
236,928 - MPMX26_00219 0.78 +1.9
236,928 - MPMX26_00219 0.78 +0.4
236,928 - MPMX26_00219 0.78 -0.1
236,928 - MPMX26_00219 0.78 -0.1
236,964 - MPMX26_00219 0.81 +0.5
236,965 - MPMX26_00219 0.81 -0.1
236,983 - MPMX26_00219 0.83 -0.1
236,983 - MPMX26_00219 0.83 +0.3
236,983 - MPMX26_00219 0.83 +0.5
236,991 - MPMX26_00219 0.84 -0.3
237,000 - MPMX26_00219 0.84 +0.7
237,081 - +0.5
237,081 - -0.2
237,093 - -0.1
237,093 - +0.6
237,114 - +0.8
237,114 - -1.5
237,509 - MPMX26_00220 0.31 +0.3
237,540 - MPMX26_00220 0.41 -0.2
237,540 - MPMX26_00220 0.41 +0.3
237,540 - MPMX26_00220 0.41 -1.0
237,576 - MPMX26_00220 0.52 +0.0
237,583 - MPMX26_00220 0.54 +0.4
237,583 - MPMX26_00220 0.54 -0.3
237,583 - MPMX26_00220 0.54 -0.9
237,584 - MPMX26_00220 0.54 +0.3
237,584 - MPMX26_00220 0.54 -0.4
237,584 - MPMX26_00220 0.54 -0.4
237,612 - MPMX26_00220 0.62 +0.4
237,649 - MPMX26_00220 0.74 +0.1
237,649 - MPMX26_00220 0.74 -1.2
237,649 - MPMX26_00220 0.74 -0.4
237,649 - MPMX26_00220 0.74 -0.6
237,663 - MPMX26_00220 0.78 +0.0
237,682 - MPMX26_00220 0.84 +0.2
237,682 - MPMX26_00220 0.84 -0.8
237,682 - MPMX26_00220 0.84 -0.6
237,682 - MPMX26_00220 0.84 +0.3
237,682 - MPMX26_00220 0.84 -0.6
237,682 - MPMX26_00220 0.84 -0.4
237,682 - MPMX26_00220 0.84 +0.2
237,687 - MPMX26_00220 0.85 -0.0
237,767 + -2.8
237,773 - +0.6
237,775 - -1.9
238,140 - MPMX26_00221 0.23 +0.1
238,150 - MPMX26_00221 0.25 -2.2
238,152 - MPMX26_00221 0.25 +0.1
238,152 - MPMX26_00221 0.25 -1.4
238,162 - MPMX26_00221 0.28 -1.2
238,162 - MPMX26_00221 0.28 -1.8
238,170 - MPMX26_00221 0.30 +0.8
238,176 - MPMX26_00221 0.31 -3.2
238,177 - MPMX26_00221 0.31 -1.5

Or see this region's nucleotide sequence