Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00185

Experiment: Ethanolamine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00183 and MPMX26_00184 are separated by 529 nucleotidesMPMX26_00184 and MPMX26_00185 are separated by 29 nucleotidesMPMX26_00185 and MPMX26_00186 are separated by 44 nucleotides MPMX26_00183: MPMX26_00183 - Phosphate-specific transport system accessory protein PhoU, at 198,310 to 199,032 _00183 MPMX26_00184: MPMX26_00184 - putative Fe(2+)-trafficking protein, at 199,562 to 199,834 _00184 MPMX26_00185: MPMX26_00185 - Argininosuccinate lyase, at 199,864 to 201,243 _00185 MPMX26_00186: MPMX26_00186 - hypothetical protein, at 201,288 to 202,427 _00186 Position (kb) 199 200 201 202Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 198.894 kb on + strand, within MPMX26_00183at 198.911 kb on + strand, within MPMX26_00183at 198.911 kb on + strand, within MPMX26_00183at 198.980 kb on + strandat 198.985 kb on + strandat 198.985 kb on + strandat 198.985 kb on + strandat 199.004 kb on + strandat 199.018 kb on + strandat 199.026 kb on + strandat 199.026 kb on + strandat 199.086 kb on - strandat 199.120 kb on - strandat 199.120 kb on - strandat 199.188 kb on - strandat 199.354 kb on - strandat 199.414 kb on - strandat 199.538 kb on + strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.546 kb on - strandat 199.690 kb on + strand, within MPMX26_00184at 199.695 kb on + strand, within MPMX26_00184at 199.698 kb on - strand, within MPMX26_00184at 199.702 kb on + strand, within MPMX26_00184at 199.702 kb on - strand, within MPMX26_00184at 199.702 kb on - strand, within MPMX26_00184at 199.702 kb on - strand, within MPMX26_00184at 199.703 kb on - strand, within MPMX26_00184at 199.729 kb on - strand, within MPMX26_00184at 199.756 kb on - strand, within MPMX26_00184at 199.765 kb on - strand, within MPMX26_00184at 199.772 kb on - strand, within MPMX26_00184at 199.788 kb on - strand, within MPMX26_00184at 199.908 kb on - strandat 199.908 kb on - strandat 199.918 kb on - strandat 199.929 kb on - strandat 200.005 kb on - strand, within MPMX26_00185at 200.005 kb on - strand, within MPMX26_00185at 200.005 kb on - strand, within MPMX26_00185at 200.015 kb on - strand, within MPMX26_00185at 200.015 kb on - strand, within MPMX26_00185at 200.015 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.036 kb on - strand, within MPMX26_00185at 200.048 kb on - strand, within MPMX26_00185at 200.048 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.058 kb on - strand, within MPMX26_00185at 200.077 kb on - strand, within MPMX26_00185at 200.153 kb on - strand, within MPMX26_00185at 200.154 kb on - strand, within MPMX26_00185at 200.180 kb on - strand, within MPMX26_00185at 200.180 kb on - strand, within MPMX26_00185at 200.180 kb on - strand, within MPMX26_00185at 200.180 kb on - strand, within MPMX26_00185at 200.221 kb on - strand, within MPMX26_00185at 200.331 kb on - strand, within MPMX26_00185at 200.349 kb on - strand, within MPMX26_00185at 200.349 kb on - strand, within MPMX26_00185at 200.442 kb on - strand, within MPMX26_00185at 200.464 kb on - strand, within MPMX26_00185at 200.464 kb on - strand, within MPMX26_00185at 200.464 kb on - strand, within MPMX26_00185at 200.464 kb on - strand, within MPMX26_00185at 200.474 kb on - strand, within MPMX26_00185at 200.474 kb on - strand, within MPMX26_00185at 200.484 kb on - strand, within MPMX26_00185at 200.562 kb on - strand, within MPMX26_00185at 200.562 kb on - strand, within MPMX26_00185at 200.618 kb on - strand, within MPMX26_00185at 200.649 kb on - strand, within MPMX26_00185at 200.651 kb on - strand, within MPMX26_00185at 200.673 kb on - strand, within MPMX26_00185at 200.673 kb on - strand, within MPMX26_00185at 200.673 kb on - strand, within MPMX26_00185at 200.673 kb on - strand, within MPMX26_00185at 200.770 kb on - strand, within MPMX26_00185at 200.777 kb on - strand, within MPMX26_00185at 200.785 kb on - strand, within MPMX26_00185at 200.785 kb on - strand, within MPMX26_00185at 200.787 kb on - strand, within MPMX26_00185at 200.795 kb on - strand, within MPMX26_00185at 200.795 kb on - strand, within MPMX26_00185at 200.917 kb on - strand, within MPMX26_00185at 200.917 kb on - strand, within MPMX26_00185at 200.917 kb on - strand, within MPMX26_00185at 200.917 kb on - strand, within MPMX26_00185at 200.976 kb on - strand, within MPMX26_00185at 200.981 kb on - strand, within MPMX26_00185at 200.982 kb on - strand, within MPMX26_00185at 200.982 kb on - strand, within MPMX26_00185at 200.982 kb on - strand, within MPMX26_00185at 200.987 kb on - strand, within MPMX26_00185at 200.992 kb on - strand, within MPMX26_00185at 200.992 kb on - strand, within MPMX26_00185at 200.998 kb on - strand, within MPMX26_00185at 201.000 kb on - strand, within MPMX26_00185at 201.000 kb on - strand, within MPMX26_00185at 201.000 kb on - strand, within MPMX26_00185at 201.006 kb on - strand, within MPMX26_00185at 201.048 kb on - strand, within MPMX26_00185at 201.068 kb on - strand, within MPMX26_00185at 201.087 kb on - strand, within MPMX26_00185at 201.108 kb on - strandat 201.110 kb on - strandat 201.113 kb on - strandat 201.128 kb on - strandat 201.154 kb on - strandat 201.274 kb on - strandat 201.275 kb on - strandat 201.277 kb on - strandat 201.354 kb on - strandat 201.354 kb on - strandat 201.553 kb on + strand, within MPMX26_00186at 201.553 kb on + strand, within MPMX26_00186at 201.578 kb on + strand, within MPMX26_00186at 201.708 kb on + strand, within MPMX26_00186at 201.856 kb on + strand, within MPMX26_00186at 201.856 kb on + strand, within MPMX26_00186at 201.866 kb on + strand, within MPMX26_00186at 201.929 kb on + strand, within MPMX26_00186at 201.929 kb on + strand, within MPMX26_00186at 201.960 kb on + strand, within MPMX26_00186at 202.085 kb on + strand, within MPMX26_00186at 202.085 kb on + strand, within MPMX26_00186at 202.085 kb on + strand, within MPMX26_00186at 202.226 kb on + strand, within MPMX26_00186

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
remove
198,894 + MPMX26_00183 0.81 -1.1
198,911 + MPMX26_00183 0.83 -1.5
198,911 + MPMX26_00183 0.83 -1.5
198,980 + -3.1
198,985 + -1.5
198,985 + -1.1
198,985 + -0.5
199,004 + +2.0
199,018 + -1.9
199,026 + +0.2
199,026 + +1.0
199,086 - -2.9
199,120 - +0.3
199,120 - +1.2
199,188 - +0.3
199,354 - -0.3
199,414 - -2.2
199,538 + +1.2
199,546 - -0.5
199,546 - -0.8
199,546 - -1.5
199,546 - +0.0
199,546 - -1.1
199,546 - -2.4
199,690 + MPMX26_00184 0.47 +0.3
199,695 + MPMX26_00184 0.49 +0.2
199,698 - MPMX26_00184 0.50 -3.6
199,702 + MPMX26_00184 0.51 +0.0
199,702 - MPMX26_00184 0.51 +0.7
199,702 - MPMX26_00184 0.51 -0.2
199,702 - MPMX26_00184 0.51 -0.3
199,703 - MPMX26_00184 0.52 +0.0
199,729 - MPMX26_00184 0.61 +0.0
199,756 - MPMX26_00184 0.71 -0.5
199,765 - MPMX26_00184 0.74 +0.1
199,772 - MPMX26_00184 0.77 +0.0
199,788 - MPMX26_00184 0.83 -2.5
199,908 - -3.3
199,908 - -5.2
199,918 - -4.1
199,929 - -3.6
200,005 - MPMX26_00185 0.10 -4.5
200,005 - MPMX26_00185 0.10 -4.4
200,005 - MPMX26_00185 0.10 -4.4
200,015 - MPMX26_00185 0.11 -3.2
200,015 - MPMX26_00185 0.11 -3.8
200,015 - MPMX26_00185 0.11 -1.9
200,036 - MPMX26_00185 0.12 -1.1
200,036 - MPMX26_00185 0.12 -3.1
200,036 - MPMX26_00185 0.12 -2.8
200,036 - MPMX26_00185 0.12 -3.8
200,036 - MPMX26_00185 0.12 -1.6
200,048 - MPMX26_00185 0.13 -4.4
200,048 - MPMX26_00185 0.13 -1.7
200,058 - MPMX26_00185 0.14 -3.3
200,058 - MPMX26_00185 0.14 -4.8
200,058 - MPMX26_00185 0.14 -2.1
200,058 - MPMX26_00185 0.14 -5.0
200,058 - MPMX26_00185 0.14 -3.2
200,058 - MPMX26_00185 0.14 -5.2
200,058 - MPMX26_00185 0.14 -4.1
200,058 - MPMX26_00185 0.14 -5.0
200,058 - MPMX26_00185 0.14 -5.9
200,077 - MPMX26_00185 0.15 -2.6
200,153 - MPMX26_00185 0.21 -2.6
200,154 - MPMX26_00185 0.21 -4.7
200,180 - MPMX26_00185 0.23 -0.8
200,180 - MPMX26_00185 0.23 -3.6
200,180 - MPMX26_00185 0.23 -3.4
200,180 - MPMX26_00185 0.23 -3.2
200,221 - MPMX26_00185 0.26 -4.5
200,331 - MPMX26_00185 0.34 -5.5
200,349 - MPMX26_00185 0.35 -4.5
200,349 - MPMX26_00185 0.35 -5.2
200,442 - MPMX26_00185 0.42 -4.5
200,464 - MPMX26_00185 0.43 -5.4
200,464 - MPMX26_00185 0.43 -4.2
200,464 - MPMX26_00185 0.43 -4.6
200,464 - MPMX26_00185 0.43 -2.7
200,474 - MPMX26_00185 0.44 -1.9
200,474 - MPMX26_00185 0.44 -1.3
200,484 - MPMX26_00185 0.45 -4.9
200,562 - MPMX26_00185 0.51 -3.9
200,562 - MPMX26_00185 0.51 -3.6
200,618 - MPMX26_00185 0.55 -2.9
200,649 - MPMX26_00185 0.57 -3.4
200,651 - MPMX26_00185 0.57 -2.8
200,673 - MPMX26_00185 0.59 -5.6
200,673 - MPMX26_00185 0.59 -3.6
200,673 - MPMX26_00185 0.59 -4.4
200,673 - MPMX26_00185 0.59 -4.5
200,770 - MPMX26_00185 0.66 -2.9
200,777 - MPMX26_00185 0.66 -3.6
200,785 - MPMX26_00185 0.67 -2.9
200,785 - MPMX26_00185 0.67 -3.7
200,787 - MPMX26_00185 0.67 -2.3
200,795 - MPMX26_00185 0.67 -4.1
200,795 - MPMX26_00185 0.67 -2.9
200,917 - MPMX26_00185 0.76 -3.5
200,917 - MPMX26_00185 0.76 -4.9
200,917 - MPMX26_00185 0.76 -4.9
200,917 - MPMX26_00185 0.76 -1.9
200,976 - MPMX26_00185 0.81 -5.2
200,981 - MPMX26_00185 0.81 -2.3
200,982 - MPMX26_00185 0.81 -4.9
200,982 - MPMX26_00185 0.81 -5.6
200,982 - MPMX26_00185 0.81 -4.2
200,987 - MPMX26_00185 0.81 -3.3
200,992 - MPMX26_00185 0.82 -1.9
200,992 - MPMX26_00185 0.82 -3.7
200,998 - MPMX26_00185 0.82 -4.3
201,000 - MPMX26_00185 0.82 -5.1
201,000 - MPMX26_00185 0.82 -5.2
201,000 - MPMX26_00185 0.82 -4.3
201,006 - MPMX26_00185 0.83 -3.4
201,048 - MPMX26_00185 0.86 -4.3
201,068 - MPMX26_00185 0.87 -3.8
201,087 - MPMX26_00185 0.89 -2.6
201,108 - -5.1
201,110 - -3.5
201,113 - -3.7
201,128 - -4.0
201,154 - -3.2
201,274 - -5.2
201,275 - -4.0
201,277 - -4.5
201,354 - +2.7
201,354 - +0.3
201,553 + MPMX26_00186 0.23 +0.3
201,553 + MPMX26_00186 0.23 +1.0
201,578 + MPMX26_00186 0.25 -1.1
201,708 + MPMX26_00186 0.37 -0.5
201,856 + MPMX26_00186 0.50 -0.4
201,856 + MPMX26_00186 0.50 -1.1
201,866 + MPMX26_00186 0.51 +0.4
201,929 + MPMX26_00186 0.56 -1.8
201,929 + MPMX26_00186 0.56 -1.8
201,960 + MPMX26_00186 0.59 +1.0
202,085 + MPMX26_00186 0.70 +1.7
202,085 + MPMX26_00186 0.70 -0.6
202,085 + MPMX26_00186 0.70 -2.8
202,226 + MPMX26_00186 0.82 +0.8

Or see this region's nucleotide sequence