Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00164

Experiment: Ethanolamine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00163 and MPMX26_00164 are separated by 14 nucleotidesMPMX26_00164 and MPMX26_00165 are separated by 218 nucleotides MPMX26_00163: MPMX26_00163 - Adaptive-response sensory-kinase SasA, at 176,459 to 178,024 _00163 MPMX26_00164: MPMX26_00164 - Response regulator GacA, at 178,039 to 178,674 _00164 MPMX26_00165: MPMX26_00165 - hypothetical protein, at 178,893 to 179,924 _00165 Position (kb) 178 179Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2at 177.157 kb on - strand, within MPMX26_00163at 177.157 kb on - strand, within MPMX26_00163at 177.203 kb on - strand, within MPMX26_00163at 177.238 kb on - strand, within MPMX26_00163at 177.238 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.275 kb on - strand, within MPMX26_00163at 177.277 kb on - strand, within MPMX26_00163at 177.277 kb on - strand, within MPMX26_00163at 177.282 kb on - strand, within MPMX26_00163at 177.342 kb on - strand, within MPMX26_00163at 177.502 kb on - strand, within MPMX26_00163at 177.502 kb on - strand, within MPMX26_00163at 177.504 kb on - strand, within MPMX26_00163at 177.516 kb on - strand, within MPMX26_00163at 177.516 kb on - strand, within MPMX26_00163at 177.516 kb on - strand, within MPMX26_00163at 177.521 kb on - strand, within MPMX26_00163at 177.521 kb on - strand, within MPMX26_00163at 177.574 kb on - strand, within MPMX26_00163at 177.728 kb on - strand, within MPMX26_00163at 177.728 kb on - strand, within MPMX26_00163at 177.728 kb on - strand, within MPMX26_00163at 177.728 kb on - strand, within MPMX26_00163at 177.728 kb on - strand, within MPMX26_00163at 177.728 kb on - strand, within MPMX26_00163at 177.728 kb on - strand, within MPMX26_00163at 177.728 kb on - strand, within MPMX26_00163at 177.753 kb on - strand, within MPMX26_00163at 177.768 kb on - strand, within MPMX26_00163at 177.773 kb on - strand, within MPMX26_00163at 177.842 kb on - strand, within MPMX26_00163at 177.852 kb on - strand, within MPMX26_00163at 177.903 kb on - strandat 177.954 kb on - strandat 177.960 kb on + strandat 177.960 kb on + strandat 177.960 kb on + strandat 177.963 kb on + strandat 177.963 kb on + strandat 177.963 kb on + strandat 177.968 kb on - strandat 177.968 kb on - strandat 177.968 kb on - strandat 177.968 kb on - strandat 177.968 kb on - strandat 177.968 kb on - strandat 177.968 kb on - strandat 177.971 kb on + strandat 177.971 kb on - strandat 177.971 kb on - strandat 177.971 kb on - strandat 177.971 kb on - strandat 177.973 kb on - strandat 177.973 kb on - strandat 177.973 kb on - strandat 177.973 kb on - strandat 177.973 kb on - strandat 177.989 kb on - strandat 177.990 kb on + strandat 177.990 kb on + strandat 177.998 kb on - strandat 178.009 kb on + strandat 178.009 kb on + strandat 178.017 kb on - strandat 178.017 kb on - strandat 178.017 kb on - strandat 178.137 kb on - strand, within MPMX26_00164at 178.138 kb on - strand, within MPMX26_00164at 178.138 kb on - strand, within MPMX26_00164at 178.138 kb on - strand, within MPMX26_00164at 178.148 kb on - strand, within MPMX26_00164at 178.148 kb on - strand, within MPMX26_00164at 178.189 kb on - strand, within MPMX26_00164at 178.189 kb on - strand, within MPMX26_00164at 178.197 kb on - strand, within MPMX26_00164at 178.197 kb on - strand, within MPMX26_00164at 178.206 kb on - strand, within MPMX26_00164at 178.246 kb on - strand, within MPMX26_00164at 178.254 kb on - strand, within MPMX26_00164at 178.271 kb on - strand, within MPMX26_00164at 178.323 kb on - strand, within MPMX26_00164at 178.324 kb on - strand, within MPMX26_00164at 178.369 kb on - strand, within MPMX26_00164at 178.377 kb on - strand, within MPMX26_00164at 178.377 kb on - strand, within MPMX26_00164at 178.390 kb on - strand, within MPMX26_00164at 178.396 kb on - strand, within MPMX26_00164at 178.413 kb on - strand, within MPMX26_00164at 178.419 kb on - strand, within MPMX26_00164at 178.445 kb on - strand, within MPMX26_00164at 178.488 kb on - strand, within MPMX26_00164at 178.488 kb on - strand, within MPMX26_00164at 178.499 kb on - strand, within MPMX26_00164at 178.507 kb on - strand, within MPMX26_00164at 178.514 kb on - strand, within MPMX26_00164at 178.573 kb on - strand, within MPMX26_00164at 178.573 kb on - strand, within MPMX26_00164at 178.574 kb on - strand, within MPMX26_00164at 178.583 kb on - strand, within MPMX26_00164at 178.583 kb on - strand, within MPMX26_00164at 178.598 kb on - strand, within MPMX26_00164at 178.599 kb on - strand, within MPMX26_00164at 178.634 kb on - strandat 178.756 kb on + strandat 178.928 kb on + strandat 178.933 kb on + strandat 178.933 kb on + strandat 178.933 kb on + strandat 178.933 kb on + strandat 178.933 kb on + strandat 178.933 kb on + strandat 178.933 kb on + strandat 178.933 kb on + strandat 178.933 kb on + strandat 178.938 kb on + strandat 178.938 kb on + strandat 178.938 kb on + strandat 178.963 kb on + strandat 178.966 kb on + strandat 178.966 kb on + strandat 178.968 kb on + strandat 178.987 kb on + strandat 178.987 kb on + strandat 178.987 kb on + strandat 178.990 kb on + strandat 178.990 kb on + strandat 179.000 kb on + strand, within MPMX26_00165at 179.013 kb on + strand, within MPMX26_00165at 179.045 kb on + strand, within MPMX26_00165at 179.073 kb on + strand, within MPMX26_00165at 179.076 kb on + strand, within MPMX26_00165at 179.086 kb on + strand, within MPMX26_00165at 179.098 kb on + strand, within MPMX26_00165at 179.116 kb on + strand, within MPMX26_00165at 179.116 kb on + strand, within MPMX26_00165at 179.122 kb on + strand, within MPMX26_00165at 179.174 kb on + strand, within MPMX26_00165at 179.192 kb on + strand, within MPMX26_00165at 179.197 kb on + strand, within MPMX26_00165at 179.197 kb on + strand, within MPMX26_00165at 179.197 kb on + strand, within MPMX26_00165at 179.197 kb on + strand, within MPMX26_00165at 179.197 kb on + strand, within MPMX26_00165at 179.197 kb on + strand, within MPMX26_00165at 179.202 kb on + strand, within MPMX26_00165at 179.207 kb on + strand, within MPMX26_00165at 179.207 kb on + strand, within MPMX26_00165at 179.207 kb on + strand, within MPMX26_00165at 179.207 kb on + strand, within MPMX26_00165at 179.207 kb on + strand, within MPMX26_00165at 179.207 kb on + strand, within MPMX26_00165at 179.207 kb on + strand, within MPMX26_00165at 179.207 kb on + strand, within MPMX26_00165at 179.207 kb on + strand, within MPMX26_00165at 179.226 kb on + strand, within MPMX26_00165at 179.249 kb on + strand, within MPMX26_00165at 179.300 kb on + strand, within MPMX26_00165at 179.305 kb on + strand, within MPMX26_00165at 179.305 kb on + strand, within MPMX26_00165at 179.316 kb on + strand, within MPMX26_00165at 179.316 kb on + strand, within MPMX26_00165at 179.316 kb on + strand, within MPMX26_00165at 179.316 kb on + strand, within MPMX26_00165at 179.380 kb on + strand, within MPMX26_00165at 179.380 kb on + strand, within MPMX26_00165at 179.380 kb on + strand, within MPMX26_00165at 179.380 kb on + strand, within MPMX26_00165at 179.380 kb on + strand, within MPMX26_00165at 179.380 kb on + strand, within MPMX26_00165at 179.380 kb on + strand, within MPMX26_00165at 179.380 kb on + strand, within MPMX26_00165at 179.413 kb on + strand, within MPMX26_00165at 179.436 kb on + strand, within MPMX26_00165at 179.466 kb on + strand, within MPMX26_00165at 179.477 kb on + strand, within MPMX26_00165at 179.477 kb on + strand, within MPMX26_00165at 179.477 kb on + strand, within MPMX26_00165at 179.485 kb on - strand, within MPMX26_00165at 179.543 kb on + strand, within MPMX26_00165at 179.548 kb on + strand, within MPMX26_00165at 179.571 kb on + strand, within MPMX26_00165at 179.571 kb on + strand, within MPMX26_00165at 179.598 kb on + strand, within MPMX26_00165at 179.623 kb on + strand, within MPMX26_00165at 179.631 kb on + strand, within MPMX26_00165at 179.640 kb on + strand, within MPMX26_00165at 179.640 kb on + strand, within MPMX26_00165

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Ethanolamine (N)
remove
177,157 - MPMX26_00163 0.45 -0.7
177,157 - MPMX26_00163 0.45 -2.4
177,203 - MPMX26_00163 0.48 -2.5
177,238 - MPMX26_00163 0.50 -0.8
177,238 - MPMX26_00163 0.50 +0.1
177,272 - MPMX26_00163 0.52 +0.0
177,272 - MPMX26_00163 0.52 -0.3
177,272 - MPMX26_00163 0.52 -1.1
177,272 - MPMX26_00163 0.52 -0.7
177,272 - MPMX26_00163 0.52 -0.9
177,275 - MPMX26_00163 0.52 -0.1
177,277 - MPMX26_00163 0.52 -0.6
177,277 - MPMX26_00163 0.52 -0.8
177,282 - MPMX26_00163 0.53 -2.5
177,342 - MPMX26_00163 0.56 -1.5
177,502 - MPMX26_00163 0.67 -0.2
177,502 - MPMX26_00163 0.67 -0.3
177,504 - MPMX26_00163 0.67 -0.9
177,516 - MPMX26_00163 0.67 -0.1
177,516 - MPMX26_00163 0.67 +2.5
177,516 - MPMX26_00163 0.67 +0.8
177,521 - MPMX26_00163 0.68 -0.5
177,521 - MPMX26_00163 0.68 -0.7
177,574 - MPMX26_00163 0.71 -0.1
177,728 - MPMX26_00163 0.81 +1.4
177,728 - MPMX26_00163 0.81 -1.5
177,728 - MPMX26_00163 0.81 +0.0
177,728 - MPMX26_00163 0.81 +0.6
177,728 - MPMX26_00163 0.81 -1.2
177,728 - MPMX26_00163 0.81 -1.8
177,728 - MPMX26_00163 0.81 -0.5
177,728 - MPMX26_00163 0.81 -1.4
177,753 - MPMX26_00163 0.83 -0.6
177,768 - MPMX26_00163 0.84 +0.5
177,773 - MPMX26_00163 0.84 +0.5
177,842 - MPMX26_00163 0.88 -0.4
177,852 - MPMX26_00163 0.89 -0.3
177,903 - -0.1
177,954 - -1.1
177,960 + -0.7
177,960 + +0.4
177,960 + -1.8
177,963 + -2.2
177,963 + +0.4
177,963 + +1.9
177,968 - -0.3
177,968 - -1.1
177,968 - -0.7
177,968 - -0.2
177,968 - -0.5
177,968 - -0.2
177,968 - -0.5
177,971 + -0.1
177,971 - -0.5
177,971 - -1.1
177,971 - -0.7
177,971 - -1.2
177,973 - -2.3
177,973 - -1.9
177,973 - -0.4
177,973 - -0.3
177,973 - -0.6
177,989 - -0.5
177,990 + -1.1
177,990 + -1.1
177,998 - -0.3
178,009 + -1.3
178,009 + -0.9
178,017 - -3.4
178,017 - +0.5
178,017 - -0.3
178,137 - MPMX26_00164 0.15 -2.5
178,138 - MPMX26_00164 0.16 -3.5
178,138 - MPMX26_00164 0.16 -1.6
178,138 - MPMX26_00164 0.16 -3.2
178,148 - MPMX26_00164 0.17 -5.0
178,148 - MPMX26_00164 0.17 -1.3
178,189 - MPMX26_00164 0.24 -2.6
178,189 - MPMX26_00164 0.24 -2.4
178,197 - MPMX26_00164 0.25 -2.2
178,197 - MPMX26_00164 0.25 -2.1
178,206 - MPMX26_00164 0.26 -3.1
178,246 - MPMX26_00164 0.33 -3.7
178,254 - MPMX26_00164 0.34 -4.9
178,271 - MPMX26_00164 0.36 -2.3
178,323 - MPMX26_00164 0.45 -3.5
178,324 - MPMX26_00164 0.45 -1.5
178,369 - MPMX26_00164 0.52 -3.7
178,377 - MPMX26_00164 0.53 -4.0
178,377 - MPMX26_00164 0.53 -1.8
178,390 - MPMX26_00164 0.55 -1.6
178,396 - MPMX26_00164 0.56 -3.6
178,413 - MPMX26_00164 0.59 -3.0
178,419 - MPMX26_00164 0.60 -3.6
178,445 - MPMX26_00164 0.64 -1.6
178,488 - MPMX26_00164 0.71 -3.3
178,488 - MPMX26_00164 0.71 -3.3
178,499 - MPMX26_00164 0.72 -4.0
178,507 - MPMX26_00164 0.74 -3.6
178,514 - MPMX26_00164 0.75 -2.3
178,573 - MPMX26_00164 0.84 -2.6
178,573 - MPMX26_00164 0.84 -3.0
178,574 - MPMX26_00164 0.84 -1.8
178,583 - MPMX26_00164 0.86 -2.5
178,583 - MPMX26_00164 0.86 -0.8
178,598 - MPMX26_00164 0.88 -3.4
178,599 - MPMX26_00164 0.88 -3.6
178,634 - -4.3
178,756 + -0.5
178,928 + -2.0
178,933 + -1.9
178,933 + -0.6
178,933 + -1.2
178,933 + -1.4
178,933 + -1.7
178,933 + -1.3
178,933 + -1.3
178,933 + -1.6
178,933 + -0.7
178,938 + -3.4
178,938 + -0.6
178,938 + -1.2
178,963 + -2.6
178,966 + -3.1
178,966 + +0.5
178,968 + -1.3
178,987 + +0.8
178,987 + +0.7
178,987 + +1.5
178,990 + +0.8
178,990 + +0.0
179,000 + MPMX26_00165 0.10 +0.4
179,013 + MPMX26_00165 0.12 +0.2
179,045 + MPMX26_00165 0.15 +0.7
179,073 + MPMX26_00165 0.17 -0.6
179,076 + MPMX26_00165 0.18 -1.2
179,086 + MPMX26_00165 0.19 +0.4
179,098 + MPMX26_00165 0.20 -1.5
179,116 + MPMX26_00165 0.22 -0.7
179,116 + MPMX26_00165 0.22 -1.9
179,122 + MPMX26_00165 0.22 -1.3
179,174 + MPMX26_00165 0.27 -1.9
179,192 + MPMX26_00165 0.29 -0.3
179,197 + MPMX26_00165 0.29 -1.1
179,197 + MPMX26_00165 0.29 +1.5
179,197 + MPMX26_00165 0.29 +0.7
179,197 + MPMX26_00165 0.29 -1.5
179,197 + MPMX26_00165 0.29 +0.3
179,197 + MPMX26_00165 0.29 -0.4
179,202 + MPMX26_00165 0.30 -0.2
179,207 + MPMX26_00165 0.30 -0.1
179,207 + MPMX26_00165 0.30 -1.4
179,207 + MPMX26_00165 0.30 -1.3
179,207 + MPMX26_00165 0.30 -0.1
179,207 + MPMX26_00165 0.30 -0.1
179,207 + MPMX26_00165 0.30 -2.5
179,207 + MPMX26_00165 0.30 -2.1
179,207 + MPMX26_00165 0.30 -0.1
179,207 + MPMX26_00165 0.30 -0.5
179,226 + MPMX26_00165 0.32 -1.3
179,249 + MPMX26_00165 0.34 -0.6
179,300 + MPMX26_00165 0.39 -0.2
179,305 + MPMX26_00165 0.40 +0.8
179,305 + MPMX26_00165 0.40 -3.4
179,316 + MPMX26_00165 0.41 -1.6
179,316 + MPMX26_00165 0.41 -1.1
179,316 + MPMX26_00165 0.41 -1.1
179,316 + MPMX26_00165 0.41 -0.4
179,380 + MPMX26_00165 0.47 +0.6
179,380 + MPMX26_00165 0.47 -0.5
179,380 + MPMX26_00165 0.47 -1.2
179,380 + MPMX26_00165 0.47 +0.9
179,380 + MPMX26_00165 0.47 +0.0
179,380 + MPMX26_00165 0.47 -1.5
179,380 + MPMX26_00165 0.47 -0.8
179,380 + MPMX26_00165 0.47 -1.3
179,413 + MPMX26_00165 0.50 -0.5
179,436 + MPMX26_00165 0.53 -0.5
179,466 + MPMX26_00165 0.56 +0.7
179,477 + MPMX26_00165 0.57 -0.3
179,477 + MPMX26_00165 0.57 -0.4
179,477 + MPMX26_00165 0.57 -0.1
179,485 - MPMX26_00165 0.57 +1.8
179,543 + MPMX26_00165 0.63 -0.7
179,548 + MPMX26_00165 0.63 -0.8
179,571 + MPMX26_00165 0.66 +0.2
179,571 + MPMX26_00165 0.66 -0.8
179,598 + MPMX26_00165 0.68 -1.0
179,623 + MPMX26_00165 0.71 -0.9
179,631 + MPMX26_00165 0.72 +0.5
179,640 + MPMX26_00165 0.72 +1.7
179,640 + MPMX26_00165 0.72 -0.5

Or see this region's nucleotide sequence