Experiment: Mucin from porcine stomach type II 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03543 and BACOVA_03544 are separated by 30 nucleotides BACOVA_03544 and BACOVA_03545 are separated by 27 nucleotides
BACOVA_03543: BACOVA_03543 - outer membrane protein assembly complex, YaeT protein, at 316,608 to 319,262
_03543
BACOVA_03544: BACOVA_03544 - di-trans,poly-cis-decaprenylcistransferase, at 319,293 to 320,027
_03544
BACOVA_03545: BACOVA_03545 - hypothetical protein, at 320,055 to 321,560
_03545
Position (kb) 319
320
321 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 319.290 kb on - strand at 319.295 kb on - strand at 319.295 kb on - strand at 320.045 kb on - strand at 320.092 kb on - strand at 320.135 kb on - strand at 320.135 kb on - strand at 320.185 kb on - strand at 320.231 kb on - strand, within BACOVA_03545 at 320.231 kb on - strand, within BACOVA_03545 at 320.262 kb on - strand, within BACOVA_03545 at 320.262 kb on - strand, within BACOVA_03545 at 320.426 kb on - strand, within BACOVA_03545 at 320.439 kb on - strand, within BACOVA_03545 at 320.477 kb on - strand, within BACOVA_03545 at 320.538 kb on - strand, within BACOVA_03545 at 320.541 kb on - strand, within BACOVA_03545 at 320.541 kb on - strand, within BACOVA_03545 at 320.559 kb on - strand, within BACOVA_03545 at 320.615 kb on - strand, within BACOVA_03545 at 320.619 kb on - strand, within BACOVA_03545 at 320.628 kb on - strand, within BACOVA_03545 at 320.725 kb on - strand, within BACOVA_03545 at 320.732 kb on - strand, within BACOVA_03545 at 320.736 kb on - strand, within BACOVA_03545 at 320.736 kb on - strand, within BACOVA_03545 at 320.736 kb on - strand, within BACOVA_03545 at 320.736 kb on - strand, within BACOVA_03545 at 320.736 kb on - strand, within BACOVA_03545 at 320.738 kb on - strand, within BACOVA_03545 at 320.738 kb on - strand, within BACOVA_03545 at 320.765 kb on - strand, within BACOVA_03545 at 320.770 kb on - strand, within BACOVA_03545 at 320.775 kb on - strand, within BACOVA_03545 at 320.784 kb on - strand, within BACOVA_03545 at 320.794 kb on - strand, within BACOVA_03545 at 320.805 kb on - strand, within BACOVA_03545 at 320.805 kb on - strand, within BACOVA_03545 at 320.870 kb on - strand, within BACOVA_03545 at 320.877 kb on - strand, within BACOVA_03545 at 320.917 kb on - strand, within BACOVA_03545 at 320.934 kb on - strand, within BACOVA_03545 at 320.952 kb on - strand, within BACOVA_03545 at 320.955 kb on - strand, within BACOVA_03545 at 320.955 kb on - strand, within BACOVA_03545 at 320.987 kb on - strand, within BACOVA_03545 at 321.022 kb on - strand, within BACOVA_03545
Per-strain Table
Position Strand Gene LocusTag Fraction Mucin from porcine stomach type II 2.5 mg/mL (C) remove 319,290 - +0.5 319,295 - -0.0 319,295 - -0.1 320,045 - +0.6 320,092 - -1.3 320,135 - -0.1 320,135 - -0.9 320,185 - +0.4 320,231 - BACOVA_03545 0.12 -0.2 320,231 - BACOVA_03545 0.12 +0.0 320,262 - BACOVA_03545 0.14 +0.2 320,262 - BACOVA_03545 0.14 -1.2 320,426 - BACOVA_03545 0.25 +0.5 320,439 - BACOVA_03545 0.25 -0.2 320,477 - BACOVA_03545 0.28 -0.3 320,538 - BACOVA_03545 0.32 +0.1 320,541 - BACOVA_03545 0.32 -0.7 320,541 - BACOVA_03545 0.32 -0.6 320,559 - BACOVA_03545 0.33 -0.6 320,615 - BACOVA_03545 0.37 -0.2 320,619 - BACOVA_03545 0.37 -0.4 320,628 - BACOVA_03545 0.38 +0.4 320,725 - BACOVA_03545 0.44 +0.0 320,732 - BACOVA_03545 0.45 -0.9 320,736 - BACOVA_03545 0.45 -0.3 320,736 - BACOVA_03545 0.45 -0.5 320,736 - BACOVA_03545 0.45 +0.4 320,736 - BACOVA_03545 0.45 +0.1 320,736 - BACOVA_03545 0.45 -0.8 320,738 - BACOVA_03545 0.45 +0.0 320,738 - BACOVA_03545 0.45 +2.4 320,765 - BACOVA_03545 0.47 -4.4 320,770 - BACOVA_03545 0.47 +0.1 320,775 - BACOVA_03545 0.48 -0.6 320,784 - BACOVA_03545 0.48 -0.8 320,794 - BACOVA_03545 0.49 +1.9 320,805 - BACOVA_03545 0.50 -0.1 320,805 - BACOVA_03545 0.50 +1.4 320,870 - BACOVA_03545 0.54 -0.9 320,877 - BACOVA_03545 0.55 +0.1 320,917 - BACOVA_03545 0.57 -0.4 320,934 - BACOVA_03545 0.58 -1.5 320,952 - BACOVA_03545 0.60 -1.1 320,955 - BACOVA_03545 0.60 -1.5 320,955 - BACOVA_03545 0.60 -1.5 320,987 - BACOVA_03545 0.62 -1.3 321,022 - BACOVA_03545 0.64 -1.8
Or see this region's nucleotide sequence