Experiment: Mucin from porcine stomach type II 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02911 and BACOVA_02912 are separated by 12 nucleotides BACOVA_02912 and BACOVA_02913 are separated by 2 nucleotides BACOVA_02913 and BACOVA_02914 overlap by 1 nucleotides BACOVA_02914 and BACOVA_02915 are separated by 17 nucleotides
BACOVA_02911: BACOVA_02911 - efflux ABC transporter, permease protein, at 414,045 to 414,926
_02911
BACOVA_02912: BACOVA_02912 - Gram-positive signal peptide protein, YSIRK family, at 414,939 to 415,181
_02912
BACOVA_02913: BACOVA_02913 - undecaprenyl-diphosphatase UppP, at 415,184 to 416,038
_02913
BACOVA_02914: BACOVA_02914 - tRNA pseudouridine synthase B, at 416,038 to 416,760
_02914
BACOVA_02915: BACOVA_02915 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 416,778 to 417,836
_02915
Position (kb) 415
416
417 Strain fitness (log2 ratio) -2
-1
0
1
2 at 414.197 kb on + strand, within BACOVA_02911 at 414.414 kb on + strand, within BACOVA_02911 at 414.470 kb on + strand, within BACOVA_02911 at 414.518 kb on + strand, within BACOVA_02911 at 414.523 kb on + strand, within BACOVA_02911 at 414.572 kb on + strand, within BACOVA_02911 at 414.638 kb on + strand, within BACOVA_02911 at 414.652 kb on + strand, within BACOVA_02911 at 414.700 kb on + strand, within BACOVA_02911 at 414.712 kb on + strand, within BACOVA_02911 at 414.771 kb on + strand, within BACOVA_02911 at 414.832 kb on + strand, within BACOVA_02911 at 414.832 kb on + strand, within BACOVA_02911 at 414.862 kb on + strand at 414.915 kb on + strand at 414.915 kb on + strand at 414.930 kb on + strand at 414.933 kb on + strand at 414.938 kb on + strand at 414.938 kb on + strand at 414.980 kb on + strand, within BACOVA_02912 at 414.980 kb on + strand, within BACOVA_02912 at 415.010 kb on + strand, within BACOVA_02912 at 415.010 kb on + strand, within BACOVA_02912 at 415.024 kb on + strand, within BACOVA_02912 at 415.024 kb on + strand, within BACOVA_02912 at 415.024 kb on + strand, within BACOVA_02912 at 416.097 kb on + strand at 416.124 kb on + strand, within BACOVA_02914 at 416.207 kb on + strand, within BACOVA_02914 at 416.207 kb on + strand, within BACOVA_02914 at 416.248 kb on + strand, within BACOVA_02914 at 416.253 kb on + strand, within BACOVA_02914 at 416.263 kb on + strand, within BACOVA_02914 at 416.263 kb on + strand, within BACOVA_02914 at 416.332 kb on + strand, within BACOVA_02914 at 416.332 kb on + strand, within BACOVA_02914 at 416.346 kb on + strand, within BACOVA_02914 at 416.427 kb on + strand, within BACOVA_02914 at 416.449 kb on + strand, within BACOVA_02914 at 416.587 kb on + strand, within BACOVA_02914 at 416.589 kb on + strand, within BACOVA_02914 at 416.589 kb on + strand, within BACOVA_02914 at 416.666 kb on + strand, within BACOVA_02914 at 416.728 kb on + strand at 416.758 kb on + strand at 416.758 kb on + strand at 416.763 kb on + strand at 416.763 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Mucin from porcine stomach type II 2.5 mg/mL (C) remove 414,197 + BACOVA_02911 0.17 -0.7 414,414 + BACOVA_02911 0.42 +0.1 414,470 + BACOVA_02911 0.48 -1.5 414,518 + BACOVA_02911 0.54 +0.3 414,523 + BACOVA_02911 0.54 -1.3 414,572 + BACOVA_02911 0.60 +0.5 414,638 + BACOVA_02911 0.67 +0.6 414,652 + BACOVA_02911 0.69 -0.7 414,700 + BACOVA_02911 0.74 -2.0 414,712 + BACOVA_02911 0.76 -0.4 414,771 + BACOVA_02911 0.82 +0.1 414,832 + BACOVA_02911 0.89 -0.4 414,832 + BACOVA_02911 0.89 -1.5 414,862 + +0.7 414,915 + +2.0 414,915 + +0.4 414,930 + -0.4 414,933 + -1.4 414,938 + -0.6 414,938 + -0.5 414,980 + BACOVA_02912 0.17 -0.8 414,980 + BACOVA_02912 0.17 +1.2 415,010 + BACOVA_02912 0.29 -0.8 415,010 + BACOVA_02912 0.29 +0.7 415,024 + BACOVA_02912 0.35 +0.4 415,024 + BACOVA_02912 0.35 +0.3 415,024 + BACOVA_02912 0.35 -0.4 416,097 + -0.4 416,124 + BACOVA_02914 0.12 -0.7 416,207 + BACOVA_02914 0.23 +0.1 416,207 + BACOVA_02914 0.23 +0.7 416,248 + BACOVA_02914 0.29 -0.4 416,253 + BACOVA_02914 0.30 -0.0 416,263 + BACOVA_02914 0.31 -0.6 416,263 + BACOVA_02914 0.31 -0.0 416,332 + BACOVA_02914 0.41 +0.8 416,332 + BACOVA_02914 0.41 -0.4 416,346 + BACOVA_02914 0.43 -0.2 416,427 + BACOVA_02914 0.54 -0.4 416,449 + BACOVA_02914 0.57 -0.6 416,587 + BACOVA_02914 0.76 -0.3 416,589 + BACOVA_02914 0.76 -0.2 416,589 + BACOVA_02914 0.76 -0.8 416,666 + BACOVA_02914 0.87 -1.6 416,728 + -0.9 416,758 + +1.0 416,758 + -0.9 416,763 + +0.2 416,763 + -0.4
Or see this region's nucleotide sequence