Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02796

Experiment: Mucin from porcine stomach type II 2.5 mg/mL (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBACOVA_02795 and BACOVA_02796 overlap by 1 nucleotidesBACOVA_02796 and BACOVA_02797 overlap by 4 nucleotides BACOVA_02795: BACOVA_02795 - glycosyl hydrolase family 2, sugar binding domain protein, at 248,593 to 250,803 _02795 BACOVA_02796: BACOVA_02796 - arylsulfatase, at 250,803 to 252,470 _02796 BACOVA_02797: BACOVA_02797 - glycosyl hydrolase, family 43, at 252,467 to 253,654 _02797 Position (kb) 250 251 252 253Strain fitness (log2 ratio) -1 0 1 2at 249.803 kb on + strand, within BACOVA_02795at 249.804 kb on - strand, within BACOVA_02795at 249.834 kb on + strand, within BACOVA_02795at 249.835 kb on - strand, within BACOVA_02795at 249.945 kb on - strand, within BACOVA_02795at 249.970 kb on + strand, within BACOVA_02795at 249.971 kb on - strand, within BACOVA_02795at 249.971 kb on - strand, within BACOVA_02795at 249.992 kb on - strand, within BACOVA_02795at 250.014 kb on + strand, within BACOVA_02795at 250.033 kb on + strand, within BACOVA_02795at 250.058 kb on - strand, within BACOVA_02795at 250.090 kb on + strand, within BACOVA_02795at 250.091 kb on - strand, within BACOVA_02795at 250.091 kb on - strand, within BACOVA_02795at 250.153 kb on - strand, within BACOVA_02795at 250.154 kb on + strand, within BACOVA_02795at 250.162 kb on - strand, within BACOVA_02795at 250.209 kb on + strand, within BACOVA_02795at 250.210 kb on - strand, within BACOVA_02795at 250.210 kb on - strand, within BACOVA_02795at 250.211 kb on + strand, within BACOVA_02795at 250.212 kb on - strand, within BACOVA_02795at 250.212 kb on - strand, within BACOVA_02795at 250.319 kb on + strand, within BACOVA_02795at 250.323 kb on + strand, within BACOVA_02795at 250.323 kb on + strand, within BACOVA_02795at 250.323 kb on + strand, within BACOVA_02795at 250.323 kb on + strand, within BACOVA_02795at 250.323 kb on + strand, within BACOVA_02795at 250.324 kb on - strand, within BACOVA_02795at 250.330 kb on - strand, within BACOVA_02795at 250.360 kb on - strand, within BACOVA_02795at 250.360 kb on - strand, within BACOVA_02795at 250.391 kb on - strand, within BACOVA_02795at 250.437 kb on + strand, within BACOVA_02795at 250.455 kb on - strand, within BACOVA_02795at 250.475 kb on + strand, within BACOVA_02795at 250.480 kb on + strand, within BACOVA_02795at 250.481 kb on - strand, within BACOVA_02795at 250.481 kb on - strand, within BACOVA_02795at 250.605 kb on - strandat 250.656 kb on + strandat 250.657 kb on - strandat 250.657 kb on - strandat 250.797 kb on + strandat 250.814 kb on + strandat 250.815 kb on - strandat 250.853 kb on + strandat 250.853 kb on + strandat 250.987 kb on + strand, within BACOVA_02796at 250.987 kb on + strand, within BACOVA_02796at 250.987 kb on + strand, within BACOVA_02796at 250.988 kb on - strand, within BACOVA_02796at 251.074 kb on + strand, within BACOVA_02796at 251.075 kb on - strand, within BACOVA_02796at 251.075 kb on - strand, within BACOVA_02796at 251.078 kb on + strand, within BACOVA_02796at 251.078 kb on + strand, within BACOVA_02796at 251.078 kb on + strand, within BACOVA_02796at 251.078 kb on + strand, within BACOVA_02796at 251.078 kb on + strand, within BACOVA_02796at 251.078 kb on + strand, within BACOVA_02796at 251.078 kb on + strand, within BACOVA_02796at 251.079 kb on - strand, within BACOVA_02796at 251.121 kb on - strand, within BACOVA_02796at 251.171 kb on - strand, within BACOVA_02796at 251.199 kb on - strand, within BACOVA_02796at 251.277 kb on - strand, within BACOVA_02796at 251.317 kb on + strand, within BACOVA_02796at 251.318 kb on - strand, within BACOVA_02796at 251.371 kb on + strand, within BACOVA_02796at 251.371 kb on + strand, within BACOVA_02796at 251.372 kb on - strand, within BACOVA_02796at 251.372 kb on - strand, within BACOVA_02796at 251.490 kb on - strand, within BACOVA_02796at 251.499 kb on - strand, within BACOVA_02796at 251.571 kb on + strand, within BACOVA_02796at 251.571 kb on + strand, within BACOVA_02796at 251.594 kb on + strand, within BACOVA_02796at 251.594 kb on + strand, within BACOVA_02796at 251.594 kb on + strand, within BACOVA_02796at 251.594 kb on + strand, within BACOVA_02796at 251.595 kb on - strand, within BACOVA_02796at 251.595 kb on - strand, within BACOVA_02796at 251.595 kb on - strand, within BACOVA_02796at 251.780 kb on + strand, within BACOVA_02796at 251.783 kb on - strand, within BACOVA_02796at 251.792 kb on + strand, within BACOVA_02796at 251.792 kb on + strand, within BACOVA_02796at 251.793 kb on - strand, within BACOVA_02796at 251.794 kb on + strand, within BACOVA_02796at 251.795 kb on - strand, within BACOVA_02796at 251.798 kb on + strand, within BACOVA_02796at 251.846 kb on - strand, within BACOVA_02796at 251.846 kb on - strand, within BACOVA_02796at 251.846 kb on - strand, within BACOVA_02796at 251.928 kb on - strand, within BACOVA_02796at 251.933 kb on - strand, within BACOVA_02796at 252.032 kb on - strand, within BACOVA_02796at 252.034 kb on + strand, within BACOVA_02796at 252.034 kb on + strand, within BACOVA_02796at 252.075 kb on + strand, within BACOVA_02796at 252.096 kb on - strand, within BACOVA_02796at 252.266 kb on + strand, within BACOVA_02796at 252.280 kb on + strand, within BACOVA_02796at 252.281 kb on - strand, within BACOVA_02796at 252.332 kb on + strandat 252.333 kb on - strandat 252.387 kb on + strandat 252.387 kb on + strandat 252.393 kb on - strandat 252.395 kb on + strandat 252.418 kb on + strandat 252.418 kb on + strandat 252.450 kb on + strandat 252.485 kb on - strandat 252.513 kb on + strandat 252.513 kb on + strandat 252.550 kb on + strandat 252.553 kb on - strandat 252.553 kb on - strandat 252.592 kb on + strand, within BACOVA_02797at 252.593 kb on - strand, within BACOVA_02797at 252.679 kb on - strand, within BACOVA_02797at 252.679 kb on - strand, within BACOVA_02797at 252.715 kb on + strand, within BACOVA_02797at 252.715 kb on + strand, within BACOVA_02797at 252.756 kb on + strand, within BACOVA_02797at 252.756 kb on + strand, within BACOVA_02797at 252.757 kb on - strand, within BACOVA_02797at 252.760 kb on + strand, within BACOVA_02797at 252.760 kb on + strand, within BACOVA_02797at 252.761 kb on - strand, within BACOVA_02797at 252.790 kb on + strand, within BACOVA_02797at 252.791 kb on - strand, within BACOVA_02797at 252.807 kb on + strand, within BACOVA_02797at 252.807 kb on + strand, within BACOVA_02797at 252.807 kb on + strand, within BACOVA_02797at 252.808 kb on - strand, within BACOVA_02797at 252.845 kb on - strand, within BACOVA_02797at 252.847 kb on - strand, within BACOVA_02797at 252.929 kb on - strand, within BACOVA_02797at 252.929 kb on - strand, within BACOVA_02797at 252.929 kb on - strand, within BACOVA_02797at 252.931 kb on - strand, within BACOVA_02797at 252.968 kb on - strand, within BACOVA_02797at 253.018 kb on + strand, within BACOVA_02797at 253.117 kb on + strand, within BACOVA_02797at 253.141 kb on + strand, within BACOVA_02797at 253.216 kb on - strand, within BACOVA_02797at 253.216 kb on - strand, within BACOVA_02797at 253.231 kb on + strand, within BACOVA_02797at 253.231 kb on + strand, within BACOVA_02797at 253.232 kb on - strand, within BACOVA_02797at 253.232 kb on - strand, within BACOVA_02797at 253.233 kb on + strand, within BACOVA_02797at 253.280 kb on + strand, within BACOVA_02797at 253.310 kb on - strand, within BACOVA_02797at 253.388 kb on - strand, within BACOVA_02797at 253.388 kb on - strand, within BACOVA_02797at 253.407 kb on + strand, within BACOVA_02797at 253.408 kb on - strand, within BACOVA_02797at 253.410 kb on + strand, within BACOVA_02797at 253.411 kb on - strand, within BACOVA_02797at 253.411 kb on - strand, within BACOVA_02797at 253.411 kb on - strand, within BACOVA_02797

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Mucin from porcine stomach type II 2.5 mg/mL (C)
remove
249,803 + BACOVA_02795 0.55 +0.7
249,804 - BACOVA_02795 0.55 +0.1
249,834 + BACOVA_02795 0.56 +0.4
249,835 - BACOVA_02795 0.56 +0.2
249,945 - BACOVA_02795 0.61 -0.8
249,970 + BACOVA_02795 0.62 -1.7
249,971 - BACOVA_02795 0.62 +0.7
249,971 - BACOVA_02795 0.62 +1.4
249,992 - BACOVA_02795 0.63 -0.2
250,014 + BACOVA_02795 0.64 +1.0
250,033 + BACOVA_02795 0.65 +0.9
250,058 - BACOVA_02795 0.66 -0.1
250,090 + BACOVA_02795 0.68 -0.6
250,091 - BACOVA_02795 0.68 +1.9
250,091 - BACOVA_02795 0.68 +1.3
250,153 - BACOVA_02795 0.71 +0.2
250,154 + BACOVA_02795 0.71 +0.2
250,162 - BACOVA_02795 0.71 +1.1
250,209 + BACOVA_02795 0.73 -0.8
250,210 - BACOVA_02795 0.73 +0.5
250,210 - BACOVA_02795 0.73 +1.7
250,211 + BACOVA_02795 0.73 +0.1
250,212 - BACOVA_02795 0.73 -0.1
250,212 - BACOVA_02795 0.73 -1.2
250,319 + BACOVA_02795 0.78 -0.9
250,323 + BACOVA_02795 0.78 -0.2
250,323 + BACOVA_02795 0.78 -0.8
250,323 + BACOVA_02795 0.78 +0.4
250,323 + BACOVA_02795 0.78 +0.6
250,323 + BACOVA_02795 0.78 -1.1
250,324 - BACOVA_02795 0.78 +0.5
250,330 - BACOVA_02795 0.79 +1.2
250,360 - BACOVA_02795 0.80 -0.3
250,360 - BACOVA_02795 0.80 +0.1
250,391 - BACOVA_02795 0.81 -0.7
250,437 + BACOVA_02795 0.83 -0.3
250,455 - BACOVA_02795 0.84 -0.9
250,475 + BACOVA_02795 0.85 +0.4
250,480 + BACOVA_02795 0.85 -0.1
250,481 - BACOVA_02795 0.85 -0.6
250,481 - BACOVA_02795 0.85 +2.1
250,605 - -0.3
250,656 + -0.1
250,657 - +1.5
250,657 - -0.4
250,797 + +0.1
250,814 + -1.5
250,815 - +0.6
250,853 + -0.7
250,853 + +0.3
250,987 + BACOVA_02796 0.11 +0.1
250,987 + BACOVA_02796 0.11 -0.2
250,987 + BACOVA_02796 0.11 -0.3
250,988 - BACOVA_02796 0.11 -0.0
251,074 + BACOVA_02796 0.16 +0.2
251,075 - BACOVA_02796 0.16 -0.0
251,075 - BACOVA_02796 0.16 -1.4
251,078 + BACOVA_02796 0.16 -0.3
251,078 + BACOVA_02796 0.16 +0.0
251,078 + BACOVA_02796 0.16 -0.2
251,078 + BACOVA_02796 0.16 -0.8
251,078 + BACOVA_02796 0.16 -0.9
251,078 + BACOVA_02796 0.16 +0.0
251,078 + BACOVA_02796 0.16 +1.2
251,079 - BACOVA_02796 0.17 -0.2
251,121 - BACOVA_02796 0.19 -0.0
251,171 - BACOVA_02796 0.22 -1.1
251,199 - BACOVA_02796 0.24 +0.4
251,277 - BACOVA_02796 0.28 -1.3
251,317 + BACOVA_02796 0.31 +0.2
251,318 - BACOVA_02796 0.31 -0.3
251,371 + BACOVA_02796 0.34 -0.2
251,371 + BACOVA_02796 0.34 -0.8
251,372 - BACOVA_02796 0.34 -0.3
251,372 - BACOVA_02796 0.34 -0.6
251,490 - BACOVA_02796 0.41 +0.7
251,499 - BACOVA_02796 0.42 +0.8
251,571 + BACOVA_02796 0.46 +0.2
251,571 + BACOVA_02796 0.46 -0.7
251,594 + BACOVA_02796 0.47 +0.7
251,594 + BACOVA_02796 0.47 +0.7
251,594 + BACOVA_02796 0.47 -0.3
251,594 + BACOVA_02796 0.47 -1.1
251,595 - BACOVA_02796 0.47 +0.6
251,595 - BACOVA_02796 0.47 +0.1
251,595 - BACOVA_02796 0.47 -0.1
251,780 + BACOVA_02796 0.59 -0.0
251,783 - BACOVA_02796 0.59 +0.5
251,792 + BACOVA_02796 0.59 +0.3
251,792 + BACOVA_02796 0.59 +1.5
251,793 - BACOVA_02796 0.59 +1.2
251,794 + BACOVA_02796 0.59 -0.7
251,795 - BACOVA_02796 0.59 +0.7
251,798 + BACOVA_02796 0.60 -0.5
251,846 - BACOVA_02796 0.63 -1.6
251,846 - BACOVA_02796 0.63 +0.7
251,846 - BACOVA_02796 0.63 +0.4
251,928 - BACOVA_02796 0.67 -0.7
251,933 - BACOVA_02796 0.68 -0.8
252,032 - BACOVA_02796 0.74 -0.3
252,034 + BACOVA_02796 0.74 -0.8
252,034 + BACOVA_02796 0.74 -0.8
252,075 + BACOVA_02796 0.76 -0.2
252,096 - BACOVA_02796 0.78 -1.4
252,266 + BACOVA_02796 0.88 -0.3
252,280 + BACOVA_02796 0.89 -0.7
252,281 - BACOVA_02796 0.89 -0.9
252,332 + +1.0
252,333 - +0.9
252,387 + -0.8
252,387 + -0.7
252,393 - -0.3
252,395 + -0.2
252,418 + -0.2
252,418 + -1.6
252,450 + +0.9
252,485 - -0.7
252,513 + -0.3
252,513 + +0.2
252,550 + -0.1
252,553 - +0.5
252,553 - -0.2
252,592 + BACOVA_02797 0.11 +0.4
252,593 - BACOVA_02797 0.11 +0.5
252,679 - BACOVA_02797 0.18 +0.1
252,679 - BACOVA_02797 0.18 -1.5
252,715 + BACOVA_02797 0.21 -1.6
252,715 + BACOVA_02797 0.21 -0.1
252,756 + BACOVA_02797 0.24 +1.2
252,756 + BACOVA_02797 0.24 -0.7
252,757 - BACOVA_02797 0.24 +0.1
252,760 + BACOVA_02797 0.25 +0.6
252,760 + BACOVA_02797 0.25 +1.0
252,761 - BACOVA_02797 0.25 -0.2
252,790 + BACOVA_02797 0.27 -0.6
252,791 - BACOVA_02797 0.27 -1.0
252,807 + BACOVA_02797 0.29 -0.1
252,807 + BACOVA_02797 0.29 -0.6
252,807 + BACOVA_02797 0.29 +0.9
252,808 - BACOVA_02797 0.29 -0.3
252,845 - BACOVA_02797 0.32 +0.2
252,847 - BACOVA_02797 0.32 -1.1
252,929 - BACOVA_02797 0.39 -0.3
252,929 - BACOVA_02797 0.39 -1.1
252,929 - BACOVA_02797 0.39 -0.5
252,931 - BACOVA_02797 0.39 -0.6
252,968 - BACOVA_02797 0.42 -0.2
253,018 + BACOVA_02797 0.46 -0.6
253,117 + BACOVA_02797 0.55 -0.5
253,141 + BACOVA_02797 0.57 +0.7
253,216 - BACOVA_02797 0.63 -0.0
253,216 - BACOVA_02797 0.63 -0.3
253,231 + BACOVA_02797 0.64 +0.1
253,231 + BACOVA_02797 0.64 -0.8
253,232 - BACOVA_02797 0.64 -0.2
253,232 - BACOVA_02797 0.64 -0.1
253,233 + BACOVA_02797 0.64 -0.4
253,280 + BACOVA_02797 0.68 +0.6
253,310 - BACOVA_02797 0.71 +0.1
253,388 - BACOVA_02797 0.78 +0.7
253,388 - BACOVA_02797 0.78 -0.1
253,407 + BACOVA_02797 0.79 -1.0
253,408 - BACOVA_02797 0.79 -0.7
253,410 + BACOVA_02797 0.79 +0.5
253,411 - BACOVA_02797 0.79 +0.3
253,411 - BACOVA_02797 0.79 -1.4
253,411 - BACOVA_02797 0.79 +0.3

Or see this region's nucleotide sequence