Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02800

Experiment: casaminos (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02798 and MPMX26_02799 are separated by 306 nucleotidesMPMX26_02799 and MPMX26_02800 are separated by 43 nucleotidesMPMX26_02800 and MPMX26_02801 are separated by 448 nucleotidesMPMX26_02801 and MPMX26_02802 are separated by 202 nucleotides MPMX26_02798: MPMX26_02798 - Bacterioferritin-associated ferredoxin, at 2,882,031 to 2,882,225 _02798 MPMX26_02799: MPMX26_02799 - Bacterioferritin, at 2,882,532 to 2,882,996 _02799 MPMX26_02800: MPMX26_02800 - hypothetical protein, at 2,883,040 to 2,883,774 _02800 MPMX26_02801: MPMX26_02801 - hypothetical protein, at 2,884,223 to 2,884,570 _02801 MPMX26_02802: MPMX26_02802 - Fimbrial protein, at 2,884,773 to 2,885,294 _02802 Position (kb) 2883 2884Strain fitness (log2 ratio) -1 0 1 2at 2882.152 kb on + strand, within MPMX26_02798at 2882.170 kb on + strand, within MPMX26_02798at 2882.469 kb on + strandat 2882.561 kb on + strandat 2882.561 kb on + strandat 2882.561 kb on + strandat 2882.593 kb on + strand, within MPMX26_02799at 2882.593 kb on + strand, within MPMX26_02799at 2882.593 kb on + strand, within MPMX26_02799at 2882.617 kb on + strand, within MPMX26_02799at 2882.631 kb on + strand, within MPMX26_02799at 2882.651 kb on + strand, within MPMX26_02799at 2882.684 kb on + strand, within MPMX26_02799at 2882.759 kb on + strand, within MPMX26_02799at 2882.759 kb on + strand, within MPMX26_02799at 2882.759 kb on + strand, within MPMX26_02799at 2882.759 kb on + strand, within MPMX26_02799at 2882.759 kb on + strand, within MPMX26_02799at 2882.759 kb on + strand, within MPMX26_02799at 2882.759 kb on + strand, within MPMX26_02799at 2882.764 kb on + strand, within MPMX26_02799at 2882.764 kb on + strand, within MPMX26_02799at 2882.769 kb on + strand, within MPMX26_02799at 2882.779 kb on + strand, within MPMX26_02799at 2882.794 kb on + strand, within MPMX26_02799at 2882.794 kb on + strand, within MPMX26_02799at 2882.794 kb on + strand, within MPMX26_02799at 2882.794 kb on + strand, within MPMX26_02799at 2882.794 kb on + strand, within MPMX26_02799at 2882.809 kb on + strand, within MPMX26_02799at 2882.810 kb on + strand, within MPMX26_02799at 2882.846 kb on + strand, within MPMX26_02799at 2882.846 kb on + strand, within MPMX26_02799at 2882.851 kb on + strand, within MPMX26_02799at 2882.861 kb on + strand, within MPMX26_02799at 2882.861 kb on + strand, within MPMX26_02799at 2882.867 kb on + strand, within MPMX26_02799at 2882.878 kb on + strand, within MPMX26_02799at 2882.929 kb on + strand, within MPMX26_02799at 2882.974 kb on + strandat 2883.102 kb on - strandat 2883.124 kb on - strand, within MPMX26_02800at 2883.124 kb on - strand, within MPMX26_02800at 2883.124 kb on - strand, within MPMX26_02800at 2883.155 kb on - strand, within MPMX26_02800at 2883.179 kb on - strand, within MPMX26_02800at 2883.184 kb on - strand, within MPMX26_02800at 2883.184 kb on - strand, within MPMX26_02800at 2883.184 kb on - strand, within MPMX26_02800at 2883.184 kb on - strand, within MPMX26_02800at 2883.216 kb on - strand, within MPMX26_02800at 2883.303 kb on - strand, within MPMX26_02800at 2883.303 kb on - strand, within MPMX26_02800at 2883.304 kb on - strand, within MPMX26_02800at 2883.304 kb on - strand, within MPMX26_02800at 2883.321 kb on - strand, within MPMX26_02800at 2883.432 kb on - strand, within MPMX26_02800at 2883.472 kb on - strand, within MPMX26_02800at 2883.517 kb on - strand, within MPMX26_02800at 2883.522 kb on - strand, within MPMX26_02800at 2883.603 kb on - strand, within MPMX26_02800at 2883.603 kb on - strand, within MPMX26_02800at 2883.603 kb on - strand, within MPMX26_02800at 2883.613 kb on - strand, within MPMX26_02800at 2883.634 kb on - strand, within MPMX26_02800at 2883.848 kb on - strandat 2883.979 kb on - strandat 2884.002 kb on - strandat 2884.276 kb on - strand, within MPMX26_02801at 2884.345 kb on - strand, within MPMX26_02801at 2884.348 kb on - strand, within MPMX26_02801at 2884.544 kb on - strandat 2884.573 kb on - strandat 2884.589 kb on - strandat 2884.589 kb on - strandat 2884.589 kb on - strandat 2884.589 kb on - strandat 2884.625 kb on - strandat 2884.629 kb on - strandat 2884.630 kb on - strandat 2884.630 kb on - strandat 2884.630 kb on - strandat 2884.630 kb on - strandat 2884.630 kb on - strandat 2884.645 kb on - strandat 2884.721 kb on - strandat 2884.750 kb on - strandat 2884.750 kb on - strandat 2884.750 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
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2,882,152 + MPMX26_02798 0.62 -0.4
2,882,170 + MPMX26_02798 0.71 -0.1
2,882,469 + +0.9
2,882,561 + +0.9
2,882,561 + +0.6
2,882,561 + +0.4
2,882,593 + MPMX26_02799 0.13 +0.3
2,882,593 + MPMX26_02799 0.13 +0.7
2,882,593 + MPMX26_02799 0.13 +1.8
2,882,617 + MPMX26_02799 0.18 -0.2
2,882,631 + MPMX26_02799 0.21 +0.0
2,882,651 + MPMX26_02799 0.26 +0.2
2,882,684 + MPMX26_02799 0.33 +0.1
2,882,759 + MPMX26_02799 0.49 +0.2
2,882,759 + MPMX26_02799 0.49 -0.2
2,882,759 + MPMX26_02799 0.49 -0.3
2,882,759 + MPMX26_02799 0.49 +0.5
2,882,759 + MPMX26_02799 0.49 +0.2
2,882,759 + MPMX26_02799 0.49 +0.3
2,882,759 + MPMX26_02799 0.49 -0.1
2,882,764 + MPMX26_02799 0.50 -0.5
2,882,764 + MPMX26_02799 0.50 -0.1
2,882,769 + MPMX26_02799 0.51 -0.9
2,882,779 + MPMX26_02799 0.53 +0.0
2,882,794 + MPMX26_02799 0.56 +0.3
2,882,794 + MPMX26_02799 0.56 -0.5
2,882,794 + MPMX26_02799 0.56 +0.1
2,882,794 + MPMX26_02799 0.56 +0.5
2,882,794 + MPMX26_02799 0.56 -0.2
2,882,809 + MPMX26_02799 0.60 +0.1
2,882,810 + MPMX26_02799 0.60 +0.2
2,882,846 + MPMX26_02799 0.68 -0.1
2,882,846 + MPMX26_02799 0.68 +0.2
2,882,851 + MPMX26_02799 0.69 +0.2
2,882,861 + MPMX26_02799 0.71 +0.5
2,882,861 + MPMX26_02799 0.71 +0.2
2,882,867 + MPMX26_02799 0.72 -0.5
2,882,878 + MPMX26_02799 0.74 -0.3
2,882,929 + MPMX26_02799 0.85 +0.4
2,882,974 + -0.1
2,883,102 - -0.6
2,883,124 - MPMX26_02800 0.11 -0.3
2,883,124 - MPMX26_02800 0.11 -0.3
2,883,124 - MPMX26_02800 0.11 -0.5
2,883,155 - MPMX26_02800 0.16 +0.2
2,883,179 - MPMX26_02800 0.19 +0.2
2,883,184 - MPMX26_02800 0.20 -0.7
2,883,184 - MPMX26_02800 0.20 -0.7
2,883,184 - MPMX26_02800 0.20 -0.7
2,883,184 - MPMX26_02800 0.20 -1.3
2,883,216 - MPMX26_02800 0.24 -1.2
2,883,303 - MPMX26_02800 0.36 -1.3
2,883,303 - MPMX26_02800 0.36 -0.2
2,883,304 - MPMX26_02800 0.36 +0.4
2,883,304 - MPMX26_02800 0.36 +0.0
2,883,321 - MPMX26_02800 0.38 -0.0
2,883,432 - MPMX26_02800 0.53 +0.4
2,883,472 - MPMX26_02800 0.59 +0.7
2,883,517 - MPMX26_02800 0.65 -0.3
2,883,522 - MPMX26_02800 0.66 +0.5
2,883,603 - MPMX26_02800 0.77 -0.5
2,883,603 - MPMX26_02800 0.77 -0.6
2,883,603 - MPMX26_02800 0.77 -0.1
2,883,613 - MPMX26_02800 0.78 -0.3
2,883,634 - MPMX26_02800 0.81 +0.1
2,883,848 - +0.0
2,883,979 - +0.2
2,884,002 - +0.0
2,884,276 - MPMX26_02801 0.15 +0.4
2,884,345 - MPMX26_02801 0.35 -0.1
2,884,348 - MPMX26_02801 0.36 -0.5
2,884,544 - +0.2
2,884,573 - -0.0
2,884,589 - +1.7
2,884,589 - -0.1
2,884,589 - +0.2
2,884,589 - -0.2
2,884,625 - -0.1
2,884,629 - -0.1
2,884,630 - -0.0
2,884,630 - -0.5
2,884,630 - -1.2
2,884,630 - -0.8
2,884,630 - -0.1
2,884,645 - +0.4
2,884,721 - -0.1
2,884,750 - -0.1
2,884,750 - +0.1
2,884,750 - -0.2

Or see this region's nucleotide sequence