Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02798 and MPMX26_02799 are separated by 306 nucleotides MPMX26_02799 and MPMX26_02800 are separated by 43 nucleotides MPMX26_02800 and MPMX26_02801 are separated by 448 nucleotides MPMX26_02801 and MPMX26_02802 are separated by 202 nucleotides
MPMX26_02798: MPMX26_02798 - Bacterioferritin-associated ferredoxin, at 2,882,031 to 2,882,225
_02798
MPMX26_02799: MPMX26_02799 - Bacterioferritin, at 2,882,532 to 2,882,996
_02799
MPMX26_02800: MPMX26_02800 - hypothetical protein, at 2,883,040 to 2,883,774
_02800
MPMX26_02801: MPMX26_02801 - hypothetical protein, at 2,884,223 to 2,884,570
_02801
MPMX26_02802: MPMX26_02802 - Fimbrial protein, at 2,884,773 to 2,885,294
_02802
Position (kb)
2883
2884 Strain fitness (log2 ratio)
-1
0
1
2 at 2882.152 kb on + strand, within MPMX26_02798 at 2882.170 kb on + strand, within MPMX26_02798 at 2882.469 kb on + strand at 2882.561 kb on + strand at 2882.561 kb on + strand at 2882.561 kb on + strand at 2882.593 kb on + strand, within MPMX26_02799 at 2882.593 kb on + strand, within MPMX26_02799 at 2882.593 kb on + strand, within MPMX26_02799 at 2882.617 kb on + strand, within MPMX26_02799 at 2882.631 kb on + strand, within MPMX26_02799 at 2882.651 kb on + strand, within MPMX26_02799 at 2882.684 kb on + strand, within MPMX26_02799 at 2882.759 kb on + strand, within MPMX26_02799 at 2882.759 kb on + strand, within MPMX26_02799 at 2882.759 kb on + strand, within MPMX26_02799 at 2882.759 kb on + strand, within MPMX26_02799 at 2882.759 kb on + strand, within MPMX26_02799 at 2882.759 kb on + strand, within MPMX26_02799 at 2882.759 kb on + strand, within MPMX26_02799 at 2882.764 kb on + strand, within MPMX26_02799 at 2882.764 kb on + strand, within MPMX26_02799 at 2882.769 kb on + strand, within MPMX26_02799 at 2882.779 kb on + strand, within MPMX26_02799 at 2882.794 kb on + strand, within MPMX26_02799 at 2882.794 kb on + strand, within MPMX26_02799 at 2882.794 kb on + strand, within MPMX26_02799 at 2882.794 kb on + strand, within MPMX26_02799 at 2882.794 kb on + strand, within MPMX26_02799 at 2882.809 kb on + strand, within MPMX26_02799 at 2882.810 kb on + strand, within MPMX26_02799 at 2882.846 kb on + strand, within MPMX26_02799 at 2882.846 kb on + strand, within MPMX26_02799 at 2882.851 kb on + strand, within MPMX26_02799 at 2882.861 kb on + strand, within MPMX26_02799 at 2882.861 kb on + strand, within MPMX26_02799 at 2882.867 kb on + strand, within MPMX26_02799 at 2882.878 kb on + strand, within MPMX26_02799 at 2882.929 kb on + strand, within MPMX26_02799 at 2882.974 kb on + strand at 2883.102 kb on - strand at 2883.124 kb on - strand, within MPMX26_02800 at 2883.124 kb on - strand, within MPMX26_02800 at 2883.124 kb on - strand, within MPMX26_02800 at 2883.155 kb on - strand, within MPMX26_02800 at 2883.179 kb on - strand, within MPMX26_02800 at 2883.184 kb on - strand, within MPMX26_02800 at 2883.184 kb on - strand, within MPMX26_02800 at 2883.184 kb on - strand, within MPMX26_02800 at 2883.184 kb on - strand, within MPMX26_02800 at 2883.216 kb on - strand, within MPMX26_02800 at 2883.303 kb on - strand, within MPMX26_02800 at 2883.303 kb on - strand, within MPMX26_02800 at 2883.304 kb on - strand, within MPMX26_02800 at 2883.304 kb on - strand, within MPMX26_02800 at 2883.321 kb on - strand, within MPMX26_02800 at 2883.432 kb on - strand, within MPMX26_02800 at 2883.472 kb on - strand, within MPMX26_02800 at 2883.517 kb on - strand, within MPMX26_02800 at 2883.522 kb on - strand, within MPMX26_02800 at 2883.603 kb on - strand, within MPMX26_02800 at 2883.603 kb on - strand, within MPMX26_02800 at 2883.603 kb on - strand, within MPMX26_02800 at 2883.613 kb on - strand, within MPMX26_02800 at 2883.634 kb on - strand, within MPMX26_02800 at 2883.848 kb on - strand at 2883.979 kb on - strand at 2884.002 kb on - strand at 2884.276 kb on - strand, within MPMX26_02801 at 2884.345 kb on - strand, within MPMX26_02801 at 2884.348 kb on - strand, within MPMX26_02801 at 2884.544 kb on - strand at 2884.573 kb on - strand at 2884.589 kb on - strand at 2884.589 kb on - strand at 2884.589 kb on - strand at 2884.589 kb on - strand at 2884.625 kb on - strand at 2884.629 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.645 kb on - strand at 2884.721 kb on - strand at 2884.750 kb on - strand at 2884.750 kb on - strand at 2884.750 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 2,882,152 + MPMX26_02798 0.62 -0.4 2,882,170 + MPMX26_02798 0.71 -0.1 2,882,469 + +0.9 2,882,561 + +0.9 2,882,561 + +0.6 2,882,561 + +0.4 2,882,593 + MPMX26_02799 0.13 +0.3 2,882,593 + MPMX26_02799 0.13 +0.7 2,882,593 + MPMX26_02799 0.13 +1.8 2,882,617 + MPMX26_02799 0.18 -0.2 2,882,631 + MPMX26_02799 0.21 +0.0 2,882,651 + MPMX26_02799 0.26 +0.2 2,882,684 + MPMX26_02799 0.33 +0.1 2,882,759 + MPMX26_02799 0.49 +0.2 2,882,759 + MPMX26_02799 0.49 -0.2 2,882,759 + MPMX26_02799 0.49 -0.3 2,882,759 + MPMX26_02799 0.49 +0.5 2,882,759 + MPMX26_02799 0.49 +0.2 2,882,759 + MPMX26_02799 0.49 +0.3 2,882,759 + MPMX26_02799 0.49 -0.1 2,882,764 + MPMX26_02799 0.50 -0.5 2,882,764 + MPMX26_02799 0.50 -0.1 2,882,769 + MPMX26_02799 0.51 -0.9 2,882,779 + MPMX26_02799 0.53 +0.0 2,882,794 + MPMX26_02799 0.56 +0.3 2,882,794 + MPMX26_02799 0.56 -0.5 2,882,794 + MPMX26_02799 0.56 +0.1 2,882,794 + MPMX26_02799 0.56 +0.5 2,882,794 + MPMX26_02799 0.56 -0.2 2,882,809 + MPMX26_02799 0.60 +0.1 2,882,810 + MPMX26_02799 0.60 +0.2 2,882,846 + MPMX26_02799 0.68 -0.1 2,882,846 + MPMX26_02799 0.68 +0.2 2,882,851 + MPMX26_02799 0.69 +0.2 2,882,861 + MPMX26_02799 0.71 +0.5 2,882,861 + MPMX26_02799 0.71 +0.2 2,882,867 + MPMX26_02799 0.72 -0.5 2,882,878 + MPMX26_02799 0.74 -0.3 2,882,929 + MPMX26_02799 0.85 +0.4 2,882,974 + -0.1 2,883,102 - -0.6 2,883,124 - MPMX26_02800 0.11 -0.3 2,883,124 - MPMX26_02800 0.11 -0.3 2,883,124 - MPMX26_02800 0.11 -0.5 2,883,155 - MPMX26_02800 0.16 +0.2 2,883,179 - MPMX26_02800 0.19 +0.2 2,883,184 - MPMX26_02800 0.20 -0.7 2,883,184 - MPMX26_02800 0.20 -0.7 2,883,184 - MPMX26_02800 0.20 -0.7 2,883,184 - MPMX26_02800 0.20 -1.3 2,883,216 - MPMX26_02800 0.24 -1.2 2,883,303 - MPMX26_02800 0.36 -1.3 2,883,303 - MPMX26_02800 0.36 -0.2 2,883,304 - MPMX26_02800 0.36 +0.4 2,883,304 - MPMX26_02800 0.36 +0.0 2,883,321 - MPMX26_02800 0.38 -0.0 2,883,432 - MPMX26_02800 0.53 +0.4 2,883,472 - MPMX26_02800 0.59 +0.7 2,883,517 - MPMX26_02800 0.65 -0.3 2,883,522 - MPMX26_02800 0.66 +0.5 2,883,603 - MPMX26_02800 0.77 -0.5 2,883,603 - MPMX26_02800 0.77 -0.6 2,883,603 - MPMX26_02800 0.77 -0.1 2,883,613 - MPMX26_02800 0.78 -0.3 2,883,634 - MPMX26_02800 0.81 +0.1 2,883,848 - +0.0 2,883,979 - +0.2 2,884,002 - +0.0 2,884,276 - MPMX26_02801 0.15 +0.4 2,884,345 - MPMX26_02801 0.35 -0.1 2,884,348 - MPMX26_02801 0.36 -0.5 2,884,544 - +0.2 2,884,573 - -0.0 2,884,589 - +1.7 2,884,589 - -0.1 2,884,589 - +0.2 2,884,589 - -0.2 2,884,625 - -0.1 2,884,629 - -0.1 2,884,630 - -0.0 2,884,630 - -0.5 2,884,630 - -1.2 2,884,630 - -0.8 2,884,630 - -0.1 2,884,645 - +0.4 2,884,721 - -0.1 2,884,750 - -0.1 2,884,750 - +0.1 2,884,750 - -0.2
Or see this region's nucleotide sequence