Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02646

Experiment: casaminos (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02644 and MPMX26_02645 are separated by 27 nucleotidesMPMX26_02645 and MPMX26_02646 are separated by 42 nucleotidesMPMX26_02646 and MPMX26_02647 are separated by 1 nucleotidesMPMX26_02647 and MPMX26_02648 are separated by 263 nucleotides MPMX26_02644: MPMX26_02644 - hypothetical protein, at 2,738,613 to 2,739,101 _02644 MPMX26_02645: MPMX26_02645 - hypothetical protein, at 2,739,129 to 2,739,632 _02645 MPMX26_02646: MPMX26_02646 - putative acyl-CoA thioester hydrolase, at 2,739,675 to 2,740,097 _02646 MPMX26_02647: MPMX26_02647 - Thioredoxin 2, at 2,740,099 to 2,740,530 _02647 MPMX26_02648: MPMX26_02648 - Beta-lactamase hydrolase-like protein, at 2,740,794 to 2,741,129 _02648 Position (kb) 2739 2740 2741Strain fitness (log2 ratio) -2 -1 0 1at 2738.785 kb on + strand, within MPMX26_02644at 2738.785 kb on + strand, within MPMX26_02644at 2738.793 kb on + strand, within MPMX26_02644at 2739.017 kb on + strand, within MPMX26_02644at 2739.017 kb on + strand, within MPMX26_02644at 2739.019 kb on + strand, within MPMX26_02644at 2739.024 kb on + strand, within MPMX26_02644at 2739.036 kb on + strand, within MPMX26_02644at 2739.062 kb on + strandat 2739.089 kb on + strandat 2739.125 kb on + strandat 2739.132 kb on + strandat 2739.148 kb on + strandat 2739.148 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.158 kb on + strandat 2739.169 kb on + strandat 2739.181 kb on + strand, within MPMX26_02645at 2739.186 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.191 kb on + strand, within MPMX26_02645at 2739.196 kb on + strand, within MPMX26_02645at 2739.198 kb on + strand, within MPMX26_02645at 2739.198 kb on + strand, within MPMX26_02645at 2739.206 kb on + strand, within MPMX26_02645at 2739.206 kb on + strand, within MPMX26_02645at 2739.236 kb on + strand, within MPMX26_02645at 2739.236 kb on + strand, within MPMX26_02645at 2739.241 kb on + strand, within MPMX26_02645at 2739.278 kb on + strand, within MPMX26_02645at 2739.282 kb on + strand, within MPMX26_02645at 2739.287 kb on + strand, within MPMX26_02645at 2739.312 kb on + strand, within MPMX26_02645at 2739.327 kb on + strand, within MPMX26_02645at 2739.327 kb on + strand, within MPMX26_02645at 2739.327 kb on + strand, within MPMX26_02645at 2739.327 kb on + strand, within MPMX26_02645at 2739.452 kb on + strand, within MPMX26_02645at 2739.467 kb on + strand, within MPMX26_02645at 2739.487 kb on + strand, within MPMX26_02645at 2739.487 kb on + strand, within MPMX26_02645at 2739.497 kb on + strand, within MPMX26_02645at 2739.497 kb on + strand, within MPMX26_02645at 2739.497 kb on + strand, within MPMX26_02645at 2739.507 kb on + strand, within MPMX26_02645at 2739.525 kb on + strand, within MPMX26_02645at 2739.549 kb on + strand, within MPMX26_02645at 2739.551 kb on + strand, within MPMX26_02645at 2739.551 kb on + strand, within MPMX26_02645at 2739.570 kb on + strand, within MPMX26_02645at 2739.581 kb on + strand, within MPMX26_02645at 2739.581 kb on + strand, within MPMX26_02645at 2739.581 kb on + strand, within MPMX26_02645at 2739.596 kb on + strandat 2739.596 kb on + strandat 2739.616 kb on + strandat 2739.616 kb on + strandat 2739.691 kb on - strandat 2739.712 kb on - strandat 2739.737 kb on - strand, within MPMX26_02646at 2739.808 kb on - strand, within MPMX26_02646at 2739.898 kb on - strand, within MPMX26_02646at 2739.898 kb on - strand, within MPMX26_02646at 2739.969 kb on - strand, within MPMX26_02646at 2739.973 kb on - strand, within MPMX26_02646at 2740.034 kb on - strand, within MPMX26_02646at 2740.068 kb on - strandat 2740.070 kb on - strandat 2740.200 kb on - strand, within MPMX26_02647at 2740.205 kb on - strand, within MPMX26_02647at 2740.205 kb on - strand, within MPMX26_02647at 2740.212 kb on - strand, within MPMX26_02647at 2740.212 kb on - strand, within MPMX26_02647at 2740.212 kb on - strand, within MPMX26_02647at 2740.212 kb on - strand, within MPMX26_02647at 2740.217 kb on - strand, within MPMX26_02647at 2740.240 kb on - strand, within MPMX26_02647at 2740.264 kb on - strand, within MPMX26_02647at 2740.264 kb on - strand, within MPMX26_02647at 2740.264 kb on - strand, within MPMX26_02647at 2740.264 kb on - strand, within MPMX26_02647at 2740.264 kb on - strand, within MPMX26_02647at 2740.264 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.340 kb on - strand, within MPMX26_02647at 2740.347 kb on - strand, within MPMX26_02647at 2740.354 kb on - strand, within MPMX26_02647at 2740.374 kb on - strand, within MPMX26_02647at 2740.374 kb on - strand, within MPMX26_02647at 2740.382 kb on - strand, within MPMX26_02647at 2740.440 kb on - strand, within MPMX26_02647at 2740.440 kb on - strand, within MPMX26_02647at 2740.450 kb on - strand, within MPMX26_02647at 2740.467 kb on - strand, within MPMX26_02647at 2740.467 kb on - strand, within MPMX26_02647at 2740.477 kb on - strand, within MPMX26_02647at 2740.518 kb on - strandat 2740.784 kb on - strandat 2740.818 kb on + strandat 2740.818 kb on + strandat 2740.833 kb on + strand, within MPMX26_02648at 2740.875 kb on + strand, within MPMX26_02648at 2740.898 kb on + strand, within MPMX26_02648at 2740.903 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.913 kb on + strand, within MPMX26_02648at 2740.953 kb on + strand, within MPMX26_02648at 2740.963 kb on + strand, within MPMX26_02648at 2740.967 kb on + strand, within MPMX26_02648at 2740.967 kb on + strand, within MPMX26_02648at 2740.977 kb on + strand, within MPMX26_02648at 2740.977 kb on + strand, within MPMX26_02648at 2740.986 kb on + strand, within MPMX26_02648at 2740.986 kb on + strand, within MPMX26_02648at 2740.991 kb on + strand, within MPMX26_02648at 2741.067 kb on + strand, within MPMX26_02648

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
remove
2,738,785 + MPMX26_02644 0.35 +0.0
2,738,785 + MPMX26_02644 0.35 -1.9
2,738,793 + MPMX26_02644 0.37 -0.2
2,739,017 + MPMX26_02644 0.83 +0.2
2,739,017 + MPMX26_02644 0.83 -0.2
2,739,019 + MPMX26_02644 0.83 +0.4
2,739,024 + MPMX26_02644 0.84 +0.3
2,739,036 + MPMX26_02644 0.87 +0.1
2,739,062 + +0.0
2,739,089 + +0.3
2,739,125 + -0.1
2,739,132 + -0.9
2,739,148 + -0.6
2,739,148 + -0.4
2,739,158 + -0.2
2,739,158 + +0.6
2,739,158 + +0.2
2,739,158 + +0.2
2,739,158 + +0.4
2,739,158 + -0.2
2,739,158 + -0.7
2,739,158 + +0.2
2,739,158 + +0.2
2,739,158 + -0.5
2,739,158 + -0.4
2,739,158 + +0.6
2,739,169 + +0.4
2,739,181 + MPMX26_02645 0.10 +0.2
2,739,186 + MPMX26_02645 0.11 +0.3
2,739,191 + MPMX26_02645 0.12 -0.6
2,739,191 + MPMX26_02645 0.12 -0.5
2,739,191 + MPMX26_02645 0.12 +0.2
2,739,191 + MPMX26_02645 0.12 +0.6
2,739,191 + MPMX26_02645 0.12 -0.0
2,739,191 + MPMX26_02645 0.12 -0.1
2,739,196 + MPMX26_02645 0.13 +0.4
2,739,198 + MPMX26_02645 0.14 -0.2
2,739,198 + MPMX26_02645 0.14 -0.3
2,739,206 + MPMX26_02645 0.15 +0.5
2,739,206 + MPMX26_02645 0.15 -0.1
2,739,236 + MPMX26_02645 0.21 +0.2
2,739,236 + MPMX26_02645 0.21 +0.1
2,739,241 + MPMX26_02645 0.22 -0.6
2,739,278 + MPMX26_02645 0.30 +0.5
2,739,282 + MPMX26_02645 0.30 -0.1
2,739,287 + MPMX26_02645 0.31 +0.6
2,739,312 + MPMX26_02645 0.36 +0.1
2,739,327 + MPMX26_02645 0.39 +0.2
2,739,327 + MPMX26_02645 0.39 -0.2
2,739,327 + MPMX26_02645 0.39 -0.3
2,739,327 + MPMX26_02645 0.39 -0.1
2,739,452 + MPMX26_02645 0.64 -0.2
2,739,467 + MPMX26_02645 0.67 +0.4
2,739,487 + MPMX26_02645 0.71 +0.2
2,739,487 + MPMX26_02645 0.71 -0.1
2,739,497 + MPMX26_02645 0.73 +0.2
2,739,497 + MPMX26_02645 0.73 -0.2
2,739,497 + MPMX26_02645 0.73 +0.3
2,739,507 + MPMX26_02645 0.75 +0.6
2,739,525 + MPMX26_02645 0.79 +0.1
2,739,549 + MPMX26_02645 0.83 -0.2
2,739,551 + MPMX26_02645 0.84 -0.3
2,739,551 + MPMX26_02645 0.84 -1.3
2,739,570 + MPMX26_02645 0.88 +0.5
2,739,581 + MPMX26_02645 0.90 +0.5
2,739,581 + MPMX26_02645 0.90 -0.1
2,739,581 + MPMX26_02645 0.90 -0.2
2,739,596 + +0.2
2,739,596 + +0.3
2,739,616 + +0.0
2,739,616 + +0.2
2,739,691 - -0.1
2,739,712 - -0.2
2,739,737 - MPMX26_02646 0.15 -0.1
2,739,808 - MPMX26_02646 0.31 +0.3
2,739,898 - MPMX26_02646 0.53 -0.0
2,739,898 - MPMX26_02646 0.53 -0.2
2,739,969 - MPMX26_02646 0.70 -0.1
2,739,973 - MPMX26_02646 0.70 -0.1
2,740,034 - MPMX26_02646 0.85 -0.2
2,740,068 - -0.0
2,740,070 - +0.1
2,740,200 - MPMX26_02647 0.23 -0.2
2,740,205 - MPMX26_02647 0.25 +0.3
2,740,205 - MPMX26_02647 0.25 +0.4
2,740,212 - MPMX26_02647 0.26 -0.2
2,740,212 - MPMX26_02647 0.26 -0.6
2,740,212 - MPMX26_02647 0.26 -0.4
2,740,212 - MPMX26_02647 0.26 +0.2
2,740,217 - MPMX26_02647 0.27 -0.5
2,740,240 - MPMX26_02647 0.33 +0.5
2,740,264 - MPMX26_02647 0.38 +0.7
2,740,264 - MPMX26_02647 0.38 -0.1
2,740,264 - MPMX26_02647 0.38 -0.4
2,740,264 - MPMX26_02647 0.38 -0.0
2,740,264 - MPMX26_02647 0.38 +0.4
2,740,264 - MPMX26_02647 0.38 -0.1
2,740,340 - MPMX26_02647 0.56 -0.5
2,740,340 - MPMX26_02647 0.56 +0.0
2,740,340 - MPMX26_02647 0.56 +0.5
2,740,340 - MPMX26_02647 0.56 -0.6
2,740,340 - MPMX26_02647 0.56 -0.5
2,740,340 - MPMX26_02647 0.56 -0.2
2,740,340 - MPMX26_02647 0.56 -0.4
2,740,340 - MPMX26_02647 0.56 -0.0
2,740,340 - MPMX26_02647 0.56 +0.1
2,740,340 - MPMX26_02647 0.56 +0.5
2,740,340 - MPMX26_02647 0.56 -0.3
2,740,340 - MPMX26_02647 0.56 -0.0
2,740,340 - MPMX26_02647 0.56 -0.3
2,740,340 - MPMX26_02647 0.56 +0.5
2,740,340 - MPMX26_02647 0.56 +0.3
2,740,340 - MPMX26_02647 0.56 +0.6
2,740,340 - MPMX26_02647 0.56 +0.3
2,740,340 - MPMX26_02647 0.56 -0.9
2,740,340 - MPMX26_02647 0.56 +0.2
2,740,340 - MPMX26_02647 0.56 +0.1
2,740,347 - MPMX26_02647 0.57 +0.1
2,740,354 - MPMX26_02647 0.59 -0.1
2,740,374 - MPMX26_02647 0.64 +0.2
2,740,374 - MPMX26_02647 0.64 -0.5
2,740,382 - MPMX26_02647 0.66 -0.1
2,740,440 - MPMX26_02647 0.79 -0.2
2,740,440 - MPMX26_02647 0.79 +0.1
2,740,450 - MPMX26_02647 0.81 -0.1
2,740,467 - MPMX26_02647 0.85 +0.3
2,740,467 - MPMX26_02647 0.85 +1.1
2,740,477 - MPMX26_02647 0.88 +0.0
2,740,518 - -0.5
2,740,784 - +0.3
2,740,818 + +0.5
2,740,818 + +1.0
2,740,833 + MPMX26_02648 0.12 -0.3
2,740,875 + MPMX26_02648 0.24 +0.0
2,740,898 + MPMX26_02648 0.31 +1.1
2,740,903 + MPMX26_02648 0.32 +0.7
2,740,913 + MPMX26_02648 0.35 +0.7
2,740,913 + MPMX26_02648 0.35 +0.1
2,740,913 + MPMX26_02648 0.35 +0.5
2,740,913 + MPMX26_02648 0.35 -1.1
2,740,913 + MPMX26_02648 0.35 +1.1
2,740,913 + MPMX26_02648 0.35 +0.5
2,740,913 + MPMX26_02648 0.35 +0.7
2,740,913 + MPMX26_02648 0.35 +1.7
2,740,913 + MPMX26_02648 0.35 +0.6
2,740,913 + MPMX26_02648 0.35 +1.0
2,740,913 + MPMX26_02648 0.35 +0.2
2,740,913 + MPMX26_02648 0.35 +1.1
2,740,913 + MPMX26_02648 0.35 +0.4
2,740,913 + MPMX26_02648 0.35 +0.6
2,740,913 + MPMX26_02648 0.35 +1.5
2,740,913 + MPMX26_02648 0.35 +1.3
2,740,913 + MPMX26_02648 0.35 -0.0
2,740,913 + MPMX26_02648 0.35 +0.8
2,740,913 + MPMX26_02648 0.35 +0.8
2,740,913 + MPMX26_02648 0.35 +0.6
2,740,913 + MPMX26_02648 0.35 +1.0
2,740,913 + MPMX26_02648 0.35 +0.5
2,740,953 + MPMX26_02648 0.47 +0.8
2,740,963 + MPMX26_02648 0.50 +0.8
2,740,967 + MPMX26_02648 0.51 +0.7
2,740,967 + MPMX26_02648 0.51 +0.3
2,740,977 + MPMX26_02648 0.54 +0.6
2,740,977 + MPMX26_02648 0.54 +0.8
2,740,986 + MPMX26_02648 0.57 -0.2
2,740,986 + MPMX26_02648 0.57 +0.5
2,740,991 + MPMX26_02648 0.59 +0.2
2,741,067 + MPMX26_02648 0.81 +0.8

Or see this region's nucleotide sequence