Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02642 and MPMX26_02643 are separated by 77 nucleotides MPMX26_02643 and MPMX26_02644 are separated by 91 nucleotides MPMX26_02644 and MPMX26_02645 are separated by 27 nucleotides MPMX26_02645 and MPMX26_02646 are separated by 42 nucleotides MPMX26_02646 and MPMX26_02647 are separated by 1 nucleotides
MPMX26_02642: MPMX26_02642 - tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC, at 2,736,222 to 2,738,129
_02642
MPMX26_02643: MPMX26_02643 - hypothetical protein, at 2,738,207 to 2,738,521
_02643
MPMX26_02644: MPMX26_02644 - hypothetical protein, at 2,738,613 to 2,739,101
_02644
MPMX26_02645: MPMX26_02645 - hypothetical protein, at 2,739,129 to 2,739,632
_02645
MPMX26_02646: MPMX26_02646 - putative acyl-CoA thioester hydrolase, at 2,739,675 to 2,740,097
_02646
MPMX26_02647: MPMX26_02647 - Thioredoxin 2, at 2,740,099 to 2,740,530
_02647
Position (kb)
2739
2740 Strain fitness (log2 ratio)
-2
-1
0
1 at 2738.142 kb on + strand at 2738.142 kb on + strand at 2738.142 kb on + strand at 2738.147 kb on + strand at 2738.152 kb on + strand at 2738.157 kb on + strand at 2738.157 kb on + strand at 2738.157 kb on + strand at 2738.157 kb on + strand at 2738.157 kb on + strand at 2738.157 kb on + strand at 2738.198 kb on - strand at 2738.238 kb on - strand at 2738.255 kb on - strand, within MPMX26_02643 at 2738.255 kb on - strand, within MPMX26_02643 at 2738.269 kb on - strand, within MPMX26_02643 at 2738.269 kb on - strand, within MPMX26_02643 at 2738.269 kb on - strand, within MPMX26_02643 at 2738.281 kb on - strand, within MPMX26_02643 at 2738.295 kb on - strand, within MPMX26_02643 at 2738.295 kb on - strand, within MPMX26_02643 at 2738.311 kb on - strand, within MPMX26_02643 at 2738.313 kb on - strand, within MPMX26_02643 at 2738.328 kb on - strand, within MPMX26_02643 at 2738.328 kb on - strand, within MPMX26_02643 at 2738.352 kb on - strand, within MPMX26_02643 at 2738.352 kb on - strand, within MPMX26_02643 at 2738.378 kb on - strand, within MPMX26_02643 at 2738.378 kb on - strand, within MPMX26_02643 at 2738.433 kb on - strand, within MPMX26_02643 at 2738.449 kb on - strand, within MPMX26_02643 at 2738.451 kb on - strand, within MPMX26_02643 at 2738.459 kb on - strand, within MPMX26_02643 at 2738.473 kb on - strand, within MPMX26_02643 at 2738.538 kb on - strand at 2738.548 kb on - strand at 2738.548 kb on - strand at 2738.594 kb on - strand at 2738.611 kb on - strand at 2738.667 kb on + strand, within MPMX26_02644 at 2738.667 kb on + strand, within MPMX26_02644 at 2738.667 kb on + strand, within MPMX26_02644 at 2738.785 kb on + strand, within MPMX26_02644 at 2738.785 kb on + strand, within MPMX26_02644 at 2738.793 kb on + strand, within MPMX26_02644 at 2739.017 kb on + strand, within MPMX26_02644 at 2739.017 kb on + strand, within MPMX26_02644 at 2739.019 kb on + strand, within MPMX26_02644 at 2739.024 kb on + strand, within MPMX26_02644 at 2739.036 kb on + strand, within MPMX26_02644 at 2739.062 kb on + strand at 2739.089 kb on + strand at 2739.125 kb on + strand at 2739.132 kb on + strand at 2739.148 kb on + strand at 2739.148 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.158 kb on + strand at 2739.169 kb on + strand at 2739.181 kb on + strand, within MPMX26_02645 at 2739.186 kb on + strand, within MPMX26_02645 at 2739.191 kb on + strand, within MPMX26_02645 at 2739.191 kb on + strand, within MPMX26_02645 at 2739.191 kb on + strand, within MPMX26_02645 at 2739.191 kb on + strand, within MPMX26_02645 at 2739.191 kb on + strand, within MPMX26_02645 at 2739.191 kb on + strand, within MPMX26_02645 at 2739.196 kb on + strand, within MPMX26_02645 at 2739.198 kb on + strand, within MPMX26_02645 at 2739.198 kb on + strand, within MPMX26_02645 at 2739.206 kb on + strand, within MPMX26_02645 at 2739.206 kb on + strand, within MPMX26_02645 at 2739.236 kb on + strand, within MPMX26_02645 at 2739.236 kb on + strand, within MPMX26_02645 at 2739.241 kb on + strand, within MPMX26_02645 at 2739.278 kb on + strand, within MPMX26_02645 at 2739.282 kb on + strand, within MPMX26_02645 at 2739.287 kb on + strand, within MPMX26_02645 at 2739.312 kb on + strand, within MPMX26_02645 at 2739.327 kb on + strand, within MPMX26_02645 at 2739.327 kb on + strand, within MPMX26_02645 at 2739.327 kb on + strand, within MPMX26_02645 at 2739.327 kb on + strand, within MPMX26_02645 at 2739.452 kb on + strand, within MPMX26_02645 at 2739.467 kb on + strand, within MPMX26_02645 at 2739.487 kb on + strand, within MPMX26_02645 at 2739.487 kb on + strand, within MPMX26_02645 at 2739.497 kb on + strand, within MPMX26_02645 at 2739.497 kb on + strand, within MPMX26_02645 at 2739.497 kb on + strand, within MPMX26_02645 at 2739.507 kb on + strand, within MPMX26_02645 at 2739.525 kb on + strand, within MPMX26_02645 at 2739.549 kb on + strand, within MPMX26_02645 at 2739.551 kb on + strand, within MPMX26_02645 at 2739.551 kb on + strand, within MPMX26_02645 at 2739.570 kb on + strand, within MPMX26_02645 at 2739.581 kb on + strand, within MPMX26_02645 at 2739.581 kb on + strand, within MPMX26_02645 at 2739.581 kb on + strand, within MPMX26_02645 at 2739.596 kb on + strand at 2739.596 kb on + strand at 2739.616 kb on + strand at 2739.616 kb on + strand at 2739.691 kb on - strand at 2739.712 kb on - strand at 2739.737 kb on - strand, within MPMX26_02646 at 2739.808 kb on - strand, within MPMX26_02646 at 2739.898 kb on - strand, within MPMX26_02646 at 2739.898 kb on - strand, within MPMX26_02646 at 2739.969 kb on - strand, within MPMX26_02646 at 2739.973 kb on - strand, within MPMX26_02646 at 2740.034 kb on - strand, within MPMX26_02646 at 2740.068 kb on - strand at 2740.070 kb on - strand at 2740.200 kb on - strand, within MPMX26_02647 at 2740.205 kb on - strand, within MPMX26_02647 at 2740.205 kb on - strand, within MPMX26_02647 at 2740.212 kb on - strand, within MPMX26_02647 at 2740.212 kb on - strand, within MPMX26_02647 at 2740.212 kb on - strand, within MPMX26_02647 at 2740.212 kb on - strand, within MPMX26_02647 at 2740.217 kb on - strand, within MPMX26_02647 at 2740.240 kb on - strand, within MPMX26_02647 at 2740.264 kb on - strand, within MPMX26_02647 at 2740.264 kb on - strand, within MPMX26_02647 at 2740.264 kb on - strand, within MPMX26_02647 at 2740.264 kb on - strand, within MPMX26_02647 at 2740.264 kb on - strand, within MPMX26_02647 at 2740.264 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.340 kb on - strand, within MPMX26_02647 at 2740.347 kb on - strand, within MPMX26_02647 at 2740.354 kb on - strand, within MPMX26_02647 at 2740.374 kb on - strand, within MPMX26_02647 at 2740.374 kb on - strand, within MPMX26_02647 at 2740.382 kb on - strand, within MPMX26_02647 at 2740.440 kb on - strand, within MPMX26_02647 at 2740.440 kb on - strand, within MPMX26_02647 at 2740.450 kb on - strand, within MPMX26_02647 at 2740.467 kb on - strand, within MPMX26_02647 at 2740.467 kb on - strand, within MPMX26_02647 at 2740.477 kb on - strand, within MPMX26_02647 at 2740.518 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 2,738,142 + +0.3 2,738,142 + +0.3 2,738,142 + -0.6 2,738,147 + +1.1 2,738,152 + -0.6 2,738,157 + +0.3 2,738,157 + -1.1 2,738,157 + -0.6 2,738,157 + -0.2 2,738,157 + +0.5 2,738,157 + +0.7 2,738,198 - +0.2 2,738,238 - -0.9 2,738,255 - MPMX26_02643 0.15 +0.4 2,738,255 - MPMX26_02643 0.15 -0.5 2,738,269 - MPMX26_02643 0.20 +0.1 2,738,269 - MPMX26_02643 0.20 +0.5 2,738,269 - MPMX26_02643 0.20 -0.2 2,738,281 - MPMX26_02643 0.23 +0.1 2,738,295 - MPMX26_02643 0.28 -0.2 2,738,295 - MPMX26_02643 0.28 -0.5 2,738,311 - MPMX26_02643 0.33 +0.3 2,738,313 - MPMX26_02643 0.34 +0.0 2,738,328 - MPMX26_02643 0.38 -0.2 2,738,328 - MPMX26_02643 0.38 +0.0 2,738,352 - MPMX26_02643 0.46 -0.2 2,738,352 - MPMX26_02643 0.46 -0.4 2,738,378 - MPMX26_02643 0.54 -0.2 2,738,378 - MPMX26_02643 0.54 +0.0 2,738,433 - MPMX26_02643 0.72 -0.1 2,738,449 - MPMX26_02643 0.77 -0.1 2,738,451 - MPMX26_02643 0.77 -0.8 2,738,459 - MPMX26_02643 0.80 -0.5 2,738,473 - MPMX26_02643 0.84 -0.2 2,738,538 - +0.4 2,738,548 - +0.5 2,738,548 - +0.1 2,738,594 - -0.3 2,738,611 - +1.1 2,738,667 + MPMX26_02644 0.11 -0.2 2,738,667 + MPMX26_02644 0.11 +0.3 2,738,667 + MPMX26_02644 0.11 +0.1 2,738,785 + MPMX26_02644 0.35 +0.0 2,738,785 + MPMX26_02644 0.35 -1.9 2,738,793 + MPMX26_02644 0.37 -0.2 2,739,017 + MPMX26_02644 0.83 +0.2 2,739,017 + MPMX26_02644 0.83 -0.2 2,739,019 + MPMX26_02644 0.83 +0.4 2,739,024 + MPMX26_02644 0.84 +0.3 2,739,036 + MPMX26_02644 0.87 +0.1 2,739,062 + +0.0 2,739,089 + +0.3 2,739,125 + -0.1 2,739,132 + -0.9 2,739,148 + -0.6 2,739,148 + -0.4 2,739,158 + -0.2 2,739,158 + +0.6 2,739,158 + +0.2 2,739,158 + +0.2 2,739,158 + +0.4 2,739,158 + -0.2 2,739,158 + -0.7 2,739,158 + +0.2 2,739,158 + +0.2 2,739,158 + -0.5 2,739,158 + -0.4 2,739,158 + +0.6 2,739,169 + +0.4 2,739,181 + MPMX26_02645 0.10 +0.2 2,739,186 + MPMX26_02645 0.11 +0.3 2,739,191 + MPMX26_02645 0.12 -0.6 2,739,191 + MPMX26_02645 0.12 -0.5 2,739,191 + MPMX26_02645 0.12 +0.2 2,739,191 + MPMX26_02645 0.12 +0.6 2,739,191 + MPMX26_02645 0.12 -0.0 2,739,191 + MPMX26_02645 0.12 -0.1 2,739,196 + MPMX26_02645 0.13 +0.4 2,739,198 + MPMX26_02645 0.14 -0.2 2,739,198 + MPMX26_02645 0.14 -0.3 2,739,206 + MPMX26_02645 0.15 +0.5 2,739,206 + MPMX26_02645 0.15 -0.1 2,739,236 + MPMX26_02645 0.21 +0.2 2,739,236 + MPMX26_02645 0.21 +0.1 2,739,241 + MPMX26_02645 0.22 -0.6 2,739,278 + MPMX26_02645 0.30 +0.5 2,739,282 + MPMX26_02645 0.30 -0.1 2,739,287 + MPMX26_02645 0.31 +0.6 2,739,312 + MPMX26_02645 0.36 +0.1 2,739,327 + MPMX26_02645 0.39 +0.2 2,739,327 + MPMX26_02645 0.39 -0.2 2,739,327 + MPMX26_02645 0.39 -0.3 2,739,327 + MPMX26_02645 0.39 -0.1 2,739,452 + MPMX26_02645 0.64 -0.2 2,739,467 + MPMX26_02645 0.67 +0.4 2,739,487 + MPMX26_02645 0.71 +0.2 2,739,487 + MPMX26_02645 0.71 -0.1 2,739,497 + MPMX26_02645 0.73 +0.2 2,739,497 + MPMX26_02645 0.73 -0.2 2,739,497 + MPMX26_02645 0.73 +0.3 2,739,507 + MPMX26_02645 0.75 +0.6 2,739,525 + MPMX26_02645 0.79 +0.1 2,739,549 + MPMX26_02645 0.83 -0.2 2,739,551 + MPMX26_02645 0.84 -0.3 2,739,551 + MPMX26_02645 0.84 -1.3 2,739,570 + MPMX26_02645 0.88 +0.5 2,739,581 + MPMX26_02645 0.90 +0.5 2,739,581 + MPMX26_02645 0.90 -0.1 2,739,581 + MPMX26_02645 0.90 -0.2 2,739,596 + +0.2 2,739,596 + +0.3 2,739,616 + +0.0 2,739,616 + +0.2 2,739,691 - -0.1 2,739,712 - -0.2 2,739,737 - MPMX26_02646 0.15 -0.1 2,739,808 - MPMX26_02646 0.31 +0.3 2,739,898 - MPMX26_02646 0.53 -0.0 2,739,898 - MPMX26_02646 0.53 -0.2 2,739,969 - MPMX26_02646 0.70 -0.1 2,739,973 - MPMX26_02646 0.70 -0.1 2,740,034 - MPMX26_02646 0.85 -0.2 2,740,068 - -0.0 2,740,070 - +0.1 2,740,200 - MPMX26_02647 0.23 -0.2 2,740,205 - MPMX26_02647 0.25 +0.3 2,740,205 - MPMX26_02647 0.25 +0.4 2,740,212 - MPMX26_02647 0.26 -0.2 2,740,212 - MPMX26_02647 0.26 -0.6 2,740,212 - MPMX26_02647 0.26 -0.4 2,740,212 - MPMX26_02647 0.26 +0.2 2,740,217 - MPMX26_02647 0.27 -0.5 2,740,240 - MPMX26_02647 0.33 +0.5 2,740,264 - MPMX26_02647 0.38 +0.7 2,740,264 - MPMX26_02647 0.38 -0.1 2,740,264 - MPMX26_02647 0.38 -0.4 2,740,264 - MPMX26_02647 0.38 -0.0 2,740,264 - MPMX26_02647 0.38 +0.4 2,740,264 - MPMX26_02647 0.38 -0.1 2,740,340 - MPMX26_02647 0.56 -0.5 2,740,340 - MPMX26_02647 0.56 +0.0 2,740,340 - MPMX26_02647 0.56 +0.5 2,740,340 - MPMX26_02647 0.56 -0.6 2,740,340 - MPMX26_02647 0.56 -0.5 2,740,340 - MPMX26_02647 0.56 -0.2 2,740,340 - MPMX26_02647 0.56 -0.4 2,740,340 - MPMX26_02647 0.56 -0.0 2,740,340 - MPMX26_02647 0.56 +0.1 2,740,340 - MPMX26_02647 0.56 +0.5 2,740,340 - MPMX26_02647 0.56 -0.3 2,740,340 - MPMX26_02647 0.56 -0.0 2,740,340 - MPMX26_02647 0.56 -0.3 2,740,340 - MPMX26_02647 0.56 +0.5 2,740,340 - MPMX26_02647 0.56 +0.3 2,740,340 - MPMX26_02647 0.56 +0.6 2,740,340 - MPMX26_02647 0.56 +0.3 2,740,340 - MPMX26_02647 0.56 -0.9 2,740,340 - MPMX26_02647 0.56 +0.2 2,740,340 - MPMX26_02647 0.56 +0.1 2,740,347 - MPMX26_02647 0.57 +0.1 2,740,354 - MPMX26_02647 0.59 -0.1 2,740,374 - MPMX26_02647 0.64 +0.2 2,740,374 - MPMX26_02647 0.64 -0.5 2,740,382 - MPMX26_02647 0.66 -0.1 2,740,440 - MPMX26_02647 0.79 -0.2 2,740,440 - MPMX26_02647 0.79 +0.1 2,740,450 - MPMX26_02647 0.81 -0.1 2,740,467 - MPMX26_02647 0.85 +0.3 2,740,467 - MPMX26_02647 0.85 +1.1 2,740,477 - MPMX26_02647 0.88 +0.0 2,740,518 - -0.5
Or see this region's nucleotide sequence