Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02615

Experiment: casaminos (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02614 and MPMX26_02615 are separated by 74 nucleotidesMPMX26_02615 and MPMX26_02616 are separated by 255 nucleotides MPMX26_02614: MPMX26_02614 - hypothetical protein, at 2,708,297 to 2,709,175 _02614 MPMX26_02615: MPMX26_02615 - hypothetical protein, at 2,709,250 to 2,710,245 _02615 MPMX26_02616: MPMX26_02616 - hypothetical protein, at 2,710,501 to 2,711,010 _02616 Position (kb) 2709 2710 2711Strain fitness (log2 ratio) -1 0 1at 2708.587 kb on + strand, within MPMX26_02614at 2708.960 kb on + strand, within MPMX26_02614at 2709.071 kb on - strand, within MPMX26_02614at 2709.373 kb on - strand, within MPMX26_02615at 2709.417 kb on - strand, within MPMX26_02615at 2709.418 kb on - strand, within MPMX26_02615at 2709.443 kb on - strand, within MPMX26_02615at 2709.443 kb on - strand, within MPMX26_02615at 2709.443 kb on - strand, within MPMX26_02615at 2709.735 kb on - strand, within MPMX26_02615at 2709.789 kb on - strand, within MPMX26_02615at 2709.870 kb on - strand, within MPMX26_02615at 2710.273 kb on - strandat 2710.692 kb on - strand, within MPMX26_02616at 2710.704 kb on - strand, within MPMX26_02616at 2710.704 kb on - strand, within MPMX26_02616at 2710.807 kb on - strand, within MPMX26_02616at 2710.869 kb on - strand, within MPMX26_02616at 2710.893 kb on + strand, within MPMX26_02616at 2711.236 kb on - strandat 2711.238 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
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2,708,587 + MPMX26_02614 0.33 +0.0
2,708,960 + MPMX26_02614 0.75 +0.2
2,709,071 - MPMX26_02614 0.88 +0.2
2,709,373 - MPMX26_02615 0.12 -0.7
2,709,417 - MPMX26_02615 0.17 +0.4
2,709,418 - MPMX26_02615 0.17 +0.3
2,709,443 - MPMX26_02615 0.19 +1.1
2,709,443 - MPMX26_02615 0.19 +1.3
2,709,443 - MPMX26_02615 0.19 +0.5
2,709,735 - MPMX26_02615 0.49 +0.8
2,709,789 - MPMX26_02615 0.54 -1.2
2,709,870 - MPMX26_02615 0.62 +1.7
2,710,273 - -0.3
2,710,692 - MPMX26_02616 0.37 -0.0
2,710,704 - MPMX26_02616 0.40 +0.2
2,710,704 - MPMX26_02616 0.40 -1.2
2,710,807 - MPMX26_02616 0.60 +0.1
2,710,869 - MPMX26_02616 0.72 +0.8
2,710,893 + MPMX26_02616 0.77 -0.1
2,711,236 - +0.4
2,711,238 - -0.0

Or see this region's nucleotide sequence