Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02154

Experiment: casaminos (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02152 and MPMX26_02153 are separated by 13 nucleotidesMPMX26_02153 and MPMX26_02154 are separated by 9 nucleotidesMPMX26_02154 and MPMX26_02155 are separated by 28 nucleotides MPMX26_02152: MPMX26_02152 - Pyridoxine 5'-phosphate synthase, at 2,208,668 to 2,209,393 _02152 MPMX26_02153: MPMX26_02153 - DNA repair protein RecO, at 2,209,407 to 2,210,117 _02153 MPMX26_02154: MPMX26_02154 - hypothetical protein, at 2,210,127 to 2,210,312 _02154 MPMX26_02155: MPMX26_02155 - GTPase Era, at 2,210,341 to 2,211,369 _02155 Position (kb) 2210 2211Strain fitness (log2 ratio) -1 0 1at 2209.277 kb on - strand, within MPMX26_02152at 2209.517 kb on - strand, within MPMX26_02153at 2209.521 kb on - strand, within MPMX26_02153at 2209.556 kb on - strand, within MPMX26_02153at 2209.574 kb on - strand, within MPMX26_02153at 2209.574 kb on - strand, within MPMX26_02153at 2209.574 kb on - strand, within MPMX26_02153at 2209.574 kb on - strand, within MPMX26_02153at 2209.574 kb on - strand, within MPMX26_02153at 2209.574 kb on - strand, within MPMX26_02153at 2209.583 kb on - strand, within MPMX26_02153at 2209.698 kb on - strand, within MPMX26_02153at 2209.698 kb on - strand, within MPMX26_02153at 2209.758 kb on - strand, within MPMX26_02153at 2209.958 kb on - strand, within MPMX26_02153at 2209.986 kb on - strand, within MPMX26_02153at 2210.056 kb on - strandat 2210.110 kb on - strandat 2210.112 kb on - strandat 2210.112 kb on - strandat 2210.120 kb on - strandat 2210.122 kb on - strandat 2210.127 kb on - strandat 2210.127 kb on - strandat 2210.127 kb on - strandat 2210.127 kb on - strandat 2210.127 kb on - strandat 2210.127 kb on - strandat 2210.128 kb on - strandat 2210.138 kb on - strandat 2210.138 kb on - strandat 2210.165 kb on - strand, within MPMX26_02154at 2210.179 kb on - strand, within MPMX26_02154at 2210.184 kb on - strand, within MPMX26_02154at 2210.186 kb on - strand, within MPMX26_02154at 2210.204 kb on - strand, within MPMX26_02154at 2210.204 kb on - strand, within MPMX26_02154at 2210.204 kb on - strand, within MPMX26_02154at 2210.204 kb on - strand, within MPMX26_02154at 2210.209 kb on - strand, within MPMX26_02154at 2210.239 kb on - strand, within MPMX26_02154at 2210.239 kb on - strand, within MPMX26_02154at 2210.239 kb on - strand, within MPMX26_02154at 2210.251 kb on - strand, within MPMX26_02154at 2210.252 kb on - strand, within MPMX26_02154at 2210.266 kb on - strand, within MPMX26_02154at 2210.273 kb on - strand, within MPMX26_02154at 2210.273 kb on - strand, within MPMX26_02154at 2210.273 kb on - strand, within MPMX26_02154at 2210.310 kb on - strandat 2210.310 kb on - strandat 2210.310 kb on - strandat 2210.320 kb on - strandat 2210.320 kb on - strandat 2210.320 kb on - strandat 2210.340 kb on - strandat 2210.354 kb on - strandat 2210.363 kb on - strandat 2210.363 kb on - strandat 2210.363 kb on - strandat 2210.363 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
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2,209,277 - MPMX26_02152 0.84 -1.5
2,209,517 - MPMX26_02153 0.15 -0.3
2,209,521 - MPMX26_02153 0.16 -1.5
2,209,556 - MPMX26_02153 0.21 +0.4
2,209,574 - MPMX26_02153 0.23 +0.0
2,209,574 - MPMX26_02153 0.23 -0.2
2,209,574 - MPMX26_02153 0.23 -0.1
2,209,574 - MPMX26_02153 0.23 -0.4
2,209,574 - MPMX26_02153 0.23 +0.3
2,209,574 - MPMX26_02153 0.23 -0.1
2,209,583 - MPMX26_02153 0.25 -0.3
2,209,698 - MPMX26_02153 0.41 -0.8
2,209,698 - MPMX26_02153 0.41 -1.3
2,209,758 - MPMX26_02153 0.49 -0.9
2,209,958 - MPMX26_02153 0.77 -0.8
2,209,986 - MPMX26_02153 0.81 -0.2
2,210,056 - -0.6
2,210,110 - -0.4
2,210,112 - -0.4
2,210,112 - -0.1
2,210,120 - -0.3
2,210,122 - +0.1
2,210,127 - -0.8
2,210,127 - -0.4
2,210,127 - -0.7
2,210,127 - -1.5
2,210,127 - -0.3
2,210,127 - -1.3
2,210,128 - -0.3
2,210,138 - +0.1
2,210,138 - -0.5
2,210,165 - MPMX26_02154 0.20 -1.0
2,210,179 - MPMX26_02154 0.28 -0.2
2,210,184 - MPMX26_02154 0.31 -0.5
2,210,186 - MPMX26_02154 0.32 -0.3
2,210,204 - MPMX26_02154 0.41 -0.8
2,210,204 - MPMX26_02154 0.41 -1.6
2,210,204 - MPMX26_02154 0.41 -0.3
2,210,204 - MPMX26_02154 0.41 -0.9
2,210,209 - MPMX26_02154 0.44 -0.8
2,210,239 - MPMX26_02154 0.60 -0.7
2,210,239 - MPMX26_02154 0.60 -0.7
2,210,239 - MPMX26_02154 0.60 -0.8
2,210,251 - MPMX26_02154 0.67 -0.1
2,210,252 - MPMX26_02154 0.67 -0.9
2,210,266 - MPMX26_02154 0.75 -1.2
2,210,273 - MPMX26_02154 0.78 -0.8
2,210,273 - MPMX26_02154 0.78 -0.5
2,210,273 - MPMX26_02154 0.78 -0.3
2,210,310 - +0.4
2,210,310 - -0.3
2,210,310 - -0.2
2,210,320 - -0.2
2,210,320 - -0.4
2,210,320 - +0.2
2,210,340 - -0.2
2,210,354 - +0.2
2,210,363 - -0.7
2,210,363 - +0.2
2,210,363 - -0.0
2,210,363 - -0.8

Or see this region's nucleotide sequence