Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02152 and MPMX26_02153 are separated by 13 nucleotides MPMX26_02153 and MPMX26_02154 are separated by 9 nucleotides MPMX26_02154 and MPMX26_02155 are separated by 28 nucleotides
MPMX26_02152: MPMX26_02152 - Pyridoxine 5'-phosphate synthase, at 2,208,668 to 2,209,393
_02152
MPMX26_02153: MPMX26_02153 - DNA repair protein RecO, at 2,209,407 to 2,210,117
_02153
MPMX26_02154: MPMX26_02154 - hypothetical protein, at 2,210,127 to 2,210,312
_02154
MPMX26_02155: MPMX26_02155 - GTPase Era, at 2,210,341 to 2,211,369
_02155
Position (kb)
2210
2211 Strain fitness (log2 ratio)
-1
0
1 at 2209.277 kb on - strand, within MPMX26_02152 at 2209.517 kb on - strand, within MPMX26_02153 at 2209.521 kb on - strand, within MPMX26_02153 at 2209.556 kb on - strand, within MPMX26_02153 at 2209.574 kb on - strand, within MPMX26_02153 at 2209.574 kb on - strand, within MPMX26_02153 at 2209.574 kb on - strand, within MPMX26_02153 at 2209.574 kb on - strand, within MPMX26_02153 at 2209.574 kb on - strand, within MPMX26_02153 at 2209.574 kb on - strand, within MPMX26_02153 at 2209.583 kb on - strand, within MPMX26_02153 at 2209.698 kb on - strand, within MPMX26_02153 at 2209.698 kb on - strand, within MPMX26_02153 at 2209.758 kb on - strand, within MPMX26_02153 at 2209.958 kb on - strand, within MPMX26_02153 at 2209.986 kb on - strand, within MPMX26_02153 at 2210.056 kb on - strand at 2210.110 kb on - strand at 2210.112 kb on - strand at 2210.112 kb on - strand at 2210.120 kb on - strand at 2210.122 kb on - strand at 2210.127 kb on - strand at 2210.127 kb on - strand at 2210.127 kb on - strand at 2210.127 kb on - strand at 2210.127 kb on - strand at 2210.127 kb on - strand at 2210.128 kb on - strand at 2210.138 kb on - strand at 2210.138 kb on - strand at 2210.165 kb on - strand, within MPMX26_02154 at 2210.179 kb on - strand, within MPMX26_02154 at 2210.184 kb on - strand, within MPMX26_02154 at 2210.186 kb on - strand, within MPMX26_02154 at 2210.204 kb on - strand, within MPMX26_02154 at 2210.204 kb on - strand, within MPMX26_02154 at 2210.204 kb on - strand, within MPMX26_02154 at 2210.204 kb on - strand, within MPMX26_02154 at 2210.209 kb on - strand, within MPMX26_02154 at 2210.239 kb on - strand, within MPMX26_02154 at 2210.239 kb on - strand, within MPMX26_02154 at 2210.239 kb on - strand, within MPMX26_02154 at 2210.251 kb on - strand, within MPMX26_02154 at 2210.252 kb on - strand, within MPMX26_02154 at 2210.266 kb on - strand, within MPMX26_02154 at 2210.273 kb on - strand, within MPMX26_02154 at 2210.273 kb on - strand, within MPMX26_02154 at 2210.273 kb on - strand, within MPMX26_02154 at 2210.310 kb on - strand at 2210.310 kb on - strand at 2210.310 kb on - strand at 2210.320 kb on - strand at 2210.320 kb on - strand at 2210.320 kb on - strand at 2210.340 kb on - strand at 2210.354 kb on - strand at 2210.363 kb on - strand at 2210.363 kb on - strand at 2210.363 kb on - strand at 2210.363 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 2,209,277 - MPMX26_02152 0.84 -1.5 2,209,517 - MPMX26_02153 0.15 -0.3 2,209,521 - MPMX26_02153 0.16 -1.5 2,209,556 - MPMX26_02153 0.21 +0.4 2,209,574 - MPMX26_02153 0.23 +0.0 2,209,574 - MPMX26_02153 0.23 -0.2 2,209,574 - MPMX26_02153 0.23 -0.1 2,209,574 - MPMX26_02153 0.23 -0.4 2,209,574 - MPMX26_02153 0.23 +0.3 2,209,574 - MPMX26_02153 0.23 -0.1 2,209,583 - MPMX26_02153 0.25 -0.3 2,209,698 - MPMX26_02153 0.41 -0.8 2,209,698 - MPMX26_02153 0.41 -1.3 2,209,758 - MPMX26_02153 0.49 -0.9 2,209,958 - MPMX26_02153 0.77 -0.8 2,209,986 - MPMX26_02153 0.81 -0.2 2,210,056 - -0.6 2,210,110 - -0.4 2,210,112 - -0.4 2,210,112 - -0.1 2,210,120 - -0.3 2,210,122 - +0.1 2,210,127 - -0.8 2,210,127 - -0.4 2,210,127 - -0.7 2,210,127 - -1.5 2,210,127 - -0.3 2,210,127 - -1.3 2,210,128 - -0.3 2,210,138 - +0.1 2,210,138 - -0.5 2,210,165 - MPMX26_02154 0.20 -1.0 2,210,179 - MPMX26_02154 0.28 -0.2 2,210,184 - MPMX26_02154 0.31 -0.5 2,210,186 - MPMX26_02154 0.32 -0.3 2,210,204 - MPMX26_02154 0.41 -0.8 2,210,204 - MPMX26_02154 0.41 -1.6 2,210,204 - MPMX26_02154 0.41 -0.3 2,210,204 - MPMX26_02154 0.41 -0.9 2,210,209 - MPMX26_02154 0.44 -0.8 2,210,239 - MPMX26_02154 0.60 -0.7 2,210,239 - MPMX26_02154 0.60 -0.7 2,210,239 - MPMX26_02154 0.60 -0.8 2,210,251 - MPMX26_02154 0.67 -0.1 2,210,252 - MPMX26_02154 0.67 -0.9 2,210,266 - MPMX26_02154 0.75 -1.2 2,210,273 - MPMX26_02154 0.78 -0.8 2,210,273 - MPMX26_02154 0.78 -0.5 2,210,273 - MPMX26_02154 0.78 -0.3 2,210,310 - +0.4 2,210,310 - -0.3 2,210,310 - -0.2 2,210,320 - -0.2 2,210,320 - -0.4 2,210,320 - +0.2 2,210,340 - -0.2 2,210,354 - +0.2 2,210,363 - -0.7 2,210,363 - +0.2 2,210,363 - -0.0 2,210,363 - -0.8
Or see this region's nucleotide sequence