Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00672 and MPMX26_00673 are separated by 182 nucleotides MPMX26_00673 and MPMX26_00674 are separated by 46 nucleotides MPMX26_00674 and MPMX26_00675 are separated by 402 nucleotides
MPMX26_00672: MPMX26_00672 - hypothetical protein, at 714,979 to 715,545
_00672
MPMX26_00673: MPMX26_00673 - Phosphoglycolate phosphatase, at 715,728 to 716,423
_00673
MPMX26_00674: MPMX26_00674 - Ammonia channel, at 716,470 to 717,657
_00674
MPMX26_00675: MPMX26_00675 - Glutamine transport ATP-binding protein GlnQ, at 718,060 to 718,803
_00675
Position (kb) 716
717
718 Strain fitness (log2 ratio) -1
0
1 at 715.764 kb on + strand at 717.176 kb on + strand, within MPMX26_00674 at 718.089 kb on - strand at 718.102 kb on - strand at 718.108 kb on - strand at 718.108 kb on - strand at 718.108 kb on - strand at 718.153 kb on - strand, within MPMX26_00675 at 718.153 kb on - strand, within MPMX26_00675 at 718.153 kb on - strand, within MPMX26_00675 at 718.153 kb on - strand, within MPMX26_00675 at 718.216 kb on - strand, within MPMX26_00675 at 718.216 kb on - strand, within MPMX26_00675 at 718.224 kb on - strand, within MPMX26_00675 at 718.224 kb on - strand, within MPMX26_00675 at 718.230 kb on - strand, within MPMX26_00675 at 718.240 kb on - strand, within MPMX26_00675 at 718.240 kb on - strand, within MPMX26_00675 at 718.240 kb on - strand, within MPMX26_00675 at 718.240 kb on - strand, within MPMX26_00675 at 718.240 kb on - strand, within MPMX26_00675 at 718.263 kb on - strand, within MPMX26_00675 at 718.263 kb on - strand, within MPMX26_00675 at 718.263 kb on - strand, within MPMX26_00675 at 718.263 kb on - strand, within MPMX26_00675 at 718.300 kb on - strand, within MPMX26_00675 at 718.368 kb on - strand, within MPMX26_00675 at 718.368 kb on - strand, within MPMX26_00675 at 718.399 kb on - strand, within MPMX26_00675 at 718.413 kb on - strand, within MPMX26_00675 at 718.414 kb on - strand, within MPMX26_00675 at 718.428 kb on - strand, within MPMX26_00675 at 718.428 kb on - strand, within MPMX26_00675 at 718.428 kb on - strand, within MPMX26_00675 at 718.428 kb on - strand, within MPMX26_00675 at 718.428 kb on - strand, within MPMX26_00675 at 718.437 kb on - strand, within MPMX26_00675 at 718.473 kb on - strand, within MPMX26_00675 at 718.473 kb on - strand, within MPMX26_00675 at 718.473 kb on - strand, within MPMX26_00675 at 718.480 kb on - strand, within MPMX26_00675 at 718.480 kb on - strand, within MPMX26_00675 at 718.480 kb on - strand, within MPMX26_00675 at 718.480 kb on - strand, within MPMX26_00675 at 718.480 kb on - strand, within MPMX26_00675 at 718.480 kb on - strand, within MPMX26_00675 at 718.480 kb on - strand, within MPMX26_00675 at 718.480 kb on - strand, within MPMX26_00675 at 718.480 kb on - strand, within MPMX26_00675 at 718.513 kb on - strand, within MPMX26_00675 at 718.513 kb on - strand, within MPMX26_00675 at 718.585 kb on - strand, within MPMX26_00675 at 718.609 kb on - strand, within MPMX26_00675 at 718.609 kb on - strand, within MPMX26_00675 at 718.615 kb on - strand, within MPMX26_00675 at 718.629 kb on - strand, within MPMX26_00675 at 718.648 kb on - strand, within MPMX26_00675
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 715,764 + +0.1 717,176 + MPMX26_00674 0.59 -0.6 718,089 - -0.3 718,102 - -0.1 718,108 - -0.3 718,108 - +0.2 718,108 - +0.9 718,153 - MPMX26_00675 0.12 +0.3 718,153 - MPMX26_00675 0.12 -0.2 718,153 - MPMX26_00675 0.12 -0.1 718,153 - MPMX26_00675 0.12 +1.2 718,216 - MPMX26_00675 0.21 +0.8 718,216 - MPMX26_00675 0.21 -0.8 718,224 - MPMX26_00675 0.22 +0.3 718,224 - MPMX26_00675 0.22 +0.4 718,230 - MPMX26_00675 0.23 -0.1 718,240 - MPMX26_00675 0.24 -0.4 718,240 - MPMX26_00675 0.24 -0.0 718,240 - MPMX26_00675 0.24 +0.4 718,240 - MPMX26_00675 0.24 -0.1 718,240 - MPMX26_00675 0.24 -0.2 718,263 - MPMX26_00675 0.27 +0.2 718,263 - MPMX26_00675 0.27 -0.3 718,263 - MPMX26_00675 0.27 +0.2 718,263 - MPMX26_00675 0.27 -0.1 718,300 - MPMX26_00675 0.32 -0.5 718,368 - MPMX26_00675 0.41 +0.3 718,368 - MPMX26_00675 0.41 -0.1 718,399 - MPMX26_00675 0.46 -0.3 718,413 - MPMX26_00675 0.47 -0.0 718,414 - MPMX26_00675 0.48 -0.2 718,428 - MPMX26_00675 0.49 -0.2 718,428 - MPMX26_00675 0.49 +0.2 718,428 - MPMX26_00675 0.49 -0.5 718,428 - MPMX26_00675 0.49 -0.2 718,428 - MPMX26_00675 0.49 -0.5 718,437 - MPMX26_00675 0.51 +0.1 718,473 - MPMX26_00675 0.56 +0.4 718,473 - MPMX26_00675 0.56 -0.3 718,473 - MPMX26_00675 0.56 +0.2 718,480 - MPMX26_00675 0.56 +0.2 718,480 - MPMX26_00675 0.56 -0.1 718,480 - MPMX26_00675 0.56 -0.1 718,480 - MPMX26_00675 0.56 -0.6 718,480 - MPMX26_00675 0.56 +0.0 718,480 - MPMX26_00675 0.56 -0.1 718,480 - MPMX26_00675 0.56 +0.3 718,480 - MPMX26_00675 0.56 +0.5 718,480 - MPMX26_00675 0.56 +0.4 718,513 - MPMX26_00675 0.61 -0.9 718,513 - MPMX26_00675 0.61 -0.7 718,585 - MPMX26_00675 0.71 -0.9 718,609 - MPMX26_00675 0.74 -0.1 718,609 - MPMX26_00675 0.74 +0.3 718,615 - MPMX26_00675 0.75 +0.3 718,629 - MPMX26_00675 0.76 -0.6 718,648 - MPMX26_00675 0.79 -0.1
Or see this region's nucleotide sequence