Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00400

Experiment: casaminos (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00399 and MPMX26_00400 are separated by 58 nucleotidesMPMX26_00400 and MPMX26_00401 are separated by 110 nucleotidesMPMX26_00401 and MPMX26_00402 overlap by 4 nucleotides MPMX26_00399: MPMX26_00399 - hypothetical protein, at 426,071 to 426,946 _00399 MPMX26_00400: MPMX26_00400 - dITP/XTP pyrophosphatase, at 427,005 to 427,637 _00400 MPMX26_00401: MPMX26_00401 - hypothetical protein, at 427,748 to 428,338 _00401 MPMX26_00402: MPMX26_00402 - Bifunctional methionine biosynthesis protein MetXA/MetW, at 428,335 to 428,928 _00402 Position (kb) 427 428Strain fitness (log2 ratio) -2 -1 0 1 2 3at 426.079 kb on + strandat 426.118 kb on + strandat 426.118 kb on + strandat 426.118 kb on + strandat 426.166 kb on + strand, within MPMX26_00399at 426.433 kb on + strand, within MPMX26_00399at 426.722 kb on + strand, within MPMX26_00399at 426.723 kb on - strand, within MPMX26_00399at 426.773 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.778 kb on + strand, within MPMX26_00399at 426.786 kb on - strand, within MPMX26_00399at 426.881 kb on + strandat 427.096 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.101 kb on - strand, within MPMX26_00400at 427.106 kb on - strand, within MPMX26_00400at 427.112 kb on - strand, within MPMX26_00400at 427.112 kb on - strand, within MPMX26_00400at 427.125 kb on - strand, within MPMX26_00400at 427.125 kb on - strand, within MPMX26_00400at 427.130 kb on - strand, within MPMX26_00400at 427.130 kb on - strand, within MPMX26_00400at 427.130 kb on - strand, within MPMX26_00400at 427.130 kb on - strand, within MPMX26_00400at 427.151 kb on - strand, within MPMX26_00400at 427.151 kb on - strand, within MPMX26_00400at 427.151 kb on - strand, within MPMX26_00400at 427.241 kb on - strand, within MPMX26_00400at 427.241 kb on - strand, within MPMX26_00400at 427.253 kb on - strand, within MPMX26_00400at 427.253 kb on - strand, within MPMX26_00400at 427.481 kb on - strand, within MPMX26_00400at 427.481 kb on - strand, within MPMX26_00400at 427.481 kb on - strand, within MPMX26_00400at 427.481 kb on - strand, within MPMX26_00400at 427.538 kb on - strand, within MPMX26_00400at 427.806 kb on - strandat 427.812 kb on - strand, within MPMX26_00401at 427.812 kb on - strand, within MPMX26_00401at 427.818 kb on - strand, within MPMX26_00401at 427.818 kb on - strand, within MPMX26_00401at 427.827 kb on - strand, within MPMX26_00401at 427.872 kb on - strand, within MPMX26_00401at 427.882 kb on - strand, within MPMX26_00401at 427.886 kb on - strand, within MPMX26_00401at 427.888 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.896 kb on - strand, within MPMX26_00401at 427.908 kb on - strand, within MPMX26_00401at 427.908 kb on - strand, within MPMX26_00401at 427.914 kb on - strand, within MPMX26_00401at 427.916 kb on - strand, within MPMX26_00401at 427.916 kb on - strand, within MPMX26_00401at 427.938 kb on - strand, within MPMX26_00401at 427.953 kb on - strand, within MPMX26_00401at 427.953 kb on - strand, within MPMX26_00401at 427.953 kb on - strand, within MPMX26_00401at 427.953 kb on - strand, within MPMX26_00401at 427.954 kb on - strand, within MPMX26_00401at 427.969 kb on - strand, within MPMX26_00401at 428.040 kb on - strand, within MPMX26_00401at 428.040 kb on - strand, within MPMX26_00401at 428.045 kb on - strand, within MPMX26_00401at 428.050 kb on - strand, within MPMX26_00401at 428.050 kb on - strand, within MPMX26_00401at 428.065 kb on - strand, within MPMX26_00401at 428.077 kb on - strand, within MPMX26_00401at 428.077 kb on - strand, within MPMX26_00401at 428.077 kb on - strand, within MPMX26_00401at 428.078 kb on - strand, within MPMX26_00401at 428.078 kb on - strand, within MPMX26_00401at 428.083 kb on - strand, within MPMX26_00401at 428.083 kb on - strand, within MPMX26_00401at 428.099 kb on - strand, within MPMX26_00401at 428.099 kb on - strand, within MPMX26_00401at 428.099 kb on - strand, within MPMX26_00401at 428.099 kb on - strand, within MPMX26_00401at 428.099 kb on - strand, within MPMX26_00401at 428.099 kb on - strand, within MPMX26_00401at 428.099 kb on - strand, within MPMX26_00401at 428.154 kb on - strand, within MPMX26_00401at 428.154 kb on - strand, within MPMX26_00401at 428.154 kb on - strand, within MPMX26_00401at 428.154 kb on - strand, within MPMX26_00401at 428.168 kb on - strand, within MPMX26_00401at 428.168 kb on - strand, within MPMX26_00401at 428.168 kb on - strand, within MPMX26_00401at 428.204 kb on - strand, within MPMX26_00401at 428.204 kb on - strand, within MPMX26_00401at 428.204 kb on - strand, within MPMX26_00401at 428.204 kb on - strand, within MPMX26_00401at 428.204 kb on - strand, within MPMX26_00401at 428.204 kb on - strand, within MPMX26_00401at 428.209 kb on - strand, within MPMX26_00401at 428.229 kb on - strand, within MPMX26_00401at 428.246 kb on - strand, within MPMX26_00401at 428.246 kb on - strand, within MPMX26_00401at 428.246 kb on - strand, within MPMX26_00401at 428.246 kb on - strand, within MPMX26_00401at 428.255 kb on - strand, within MPMX26_00401at 428.255 kb on - strand, within MPMX26_00401at 428.273 kb on - strand, within MPMX26_00401at 428.285 kb on - strandat 428.290 kb on - strandat 428.290 kb on - strandat 428.321 kb on - strandat 428.326 kb on - strandat 428.400 kb on - strand, within MPMX26_00402at 428.403 kb on - strand, within MPMX26_00402at 428.422 kb on - strand, within MPMX26_00402at 428.477 kb on - strand, within MPMX26_00402at 428.507 kb on - strand, within MPMX26_00402at 428.515 kb on - strand, within MPMX26_00402at 428.515 kb on - strand, within MPMX26_00402at 428.515 kb on - strand, within MPMX26_00402at 428.517 kb on - strand, within MPMX26_00402at 428.522 kb on - strand, within MPMX26_00402at 428.527 kb on - strand, within MPMX26_00402at 428.527 kb on - strand, within MPMX26_00402at 428.532 kb on - strand, within MPMX26_00402at 428.532 kb on - strand, within MPMX26_00402at 428.532 kb on - strand, within MPMX26_00402at 428.532 kb on - strand, within MPMX26_00402at 428.532 kb on - strand, within MPMX26_00402at 428.601 kb on - strand, within MPMX26_00402

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
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426,079 + -0.1
426,118 + -0.1
426,118 + +0.6
426,118 + +0.6
426,166 + MPMX26_00399 0.11 +0.8
426,433 + MPMX26_00399 0.41 -1.5
426,722 + MPMX26_00399 0.74 +1.0
426,723 - MPMX26_00399 0.74 +0.1
426,773 + MPMX26_00399 0.80 +0.4
426,778 + MPMX26_00399 0.81 +0.8
426,778 + MPMX26_00399 0.81 +1.7
426,778 + MPMX26_00399 0.81 -0.2
426,778 + MPMX26_00399 0.81 +0.7
426,778 + MPMX26_00399 0.81 +0.5
426,786 - MPMX26_00399 0.82 +1.0
426,881 + -0.1
427,096 - MPMX26_00400 0.14 -0.6
427,101 - MPMX26_00400 0.15 -0.2
427,101 - MPMX26_00400 0.15 -0.1
427,101 - MPMX26_00400 0.15 -0.0
427,101 - MPMX26_00400 0.15 -0.2
427,101 - MPMX26_00400 0.15 -0.5
427,101 - MPMX26_00400 0.15 -0.3
427,101 - MPMX26_00400 0.15 +0.1
427,101 - MPMX26_00400 0.15 -1.5
427,101 - MPMX26_00400 0.15 -0.3
427,101 - MPMX26_00400 0.15 -0.1
427,101 - MPMX26_00400 0.15 +0.1
427,101 - MPMX26_00400 0.15 -1.0
427,101 - MPMX26_00400 0.15 -0.2
427,101 - MPMX26_00400 0.15 +0.0
427,101 - MPMX26_00400 0.15 +0.3
427,101 - MPMX26_00400 0.15 -0.0
427,101 - MPMX26_00400 0.15 +0.0
427,106 - MPMX26_00400 0.16 -0.1
427,112 - MPMX26_00400 0.17 -0.8
427,112 - MPMX26_00400 0.17 -0.4
427,125 - MPMX26_00400 0.19 -0.6
427,125 - MPMX26_00400 0.19 -0.2
427,130 - MPMX26_00400 0.20 -0.6
427,130 - MPMX26_00400 0.20 +0.2
427,130 - MPMX26_00400 0.20 +0.1
427,130 - MPMX26_00400 0.20 +0.0
427,151 - MPMX26_00400 0.23 -0.2
427,151 - MPMX26_00400 0.23 -0.6
427,151 - MPMX26_00400 0.23 -0.1
427,241 - MPMX26_00400 0.37 +0.1
427,241 - MPMX26_00400 0.37 -0.1
427,253 - MPMX26_00400 0.39 +0.2
427,253 - MPMX26_00400 0.39 +0.1
427,481 - MPMX26_00400 0.75 +0.3
427,481 - MPMX26_00400 0.75 +0.5
427,481 - MPMX26_00400 0.75 -0.3
427,481 - MPMX26_00400 0.75 -0.2
427,538 - MPMX26_00400 0.84 -0.5
427,806 - +0.6
427,812 - MPMX26_00401 0.11 +1.1
427,812 - MPMX26_00401 0.11 +1.0
427,818 - MPMX26_00401 0.12 +0.9
427,818 - MPMX26_00401 0.12 +0.8
427,827 - MPMX26_00401 0.13 +1.1
427,872 - MPMX26_00401 0.21 +0.1
427,882 - MPMX26_00401 0.23 +0.7
427,886 - MPMX26_00401 0.23 +0.9
427,888 - MPMX26_00401 0.24 +0.6
427,896 - MPMX26_00401 0.25 +0.2
427,896 - MPMX26_00401 0.25 +0.6
427,896 - MPMX26_00401 0.25 +1.7
427,896 - MPMX26_00401 0.25 +0.7
427,896 - MPMX26_00401 0.25 +1.1
427,896 - MPMX26_00401 0.25 +0.8
427,896 - MPMX26_00401 0.25 +1.3
427,896 - MPMX26_00401 0.25 +1.2
427,896 - MPMX26_00401 0.25 +0.9
427,896 - MPMX26_00401 0.25 +2.2
427,908 - MPMX26_00401 0.27 +0.7
427,908 - MPMX26_00401 0.27 +0.8
427,914 - MPMX26_00401 0.28 +0.7
427,916 - MPMX26_00401 0.28 +1.0
427,916 - MPMX26_00401 0.28 +0.8
427,938 - MPMX26_00401 0.32 +0.9
427,953 - MPMX26_00401 0.35 +0.3
427,953 - MPMX26_00401 0.35 +0.5
427,953 - MPMX26_00401 0.35 +0.1
427,953 - MPMX26_00401 0.35 +0.5
427,954 - MPMX26_00401 0.35 +0.7
427,969 - MPMX26_00401 0.37 +1.0
428,040 - MPMX26_00401 0.49 +0.5
428,040 - MPMX26_00401 0.49 +0.5
428,045 - MPMX26_00401 0.50 +0.8
428,050 - MPMX26_00401 0.51 +0.6
428,050 - MPMX26_00401 0.51 +0.6
428,065 - MPMX26_00401 0.54 +1.1
428,077 - MPMX26_00401 0.56 +0.5
428,077 - MPMX26_00401 0.56 +0.8
428,077 - MPMX26_00401 0.56 +1.0
428,078 - MPMX26_00401 0.56 +0.8
428,078 - MPMX26_00401 0.56 +0.9
428,083 - MPMX26_00401 0.57 +1.3
428,083 - MPMX26_00401 0.57 -1.4
428,099 - MPMX26_00401 0.59 +0.8
428,099 - MPMX26_00401 0.59 +0.9
428,099 - MPMX26_00401 0.59 +1.0
428,099 - MPMX26_00401 0.59 +0.7
428,099 - MPMX26_00401 0.59 +0.9
428,099 - MPMX26_00401 0.59 +1.0
428,099 - MPMX26_00401 0.59 +0.6
428,154 - MPMX26_00401 0.69 +2.1
428,154 - MPMX26_00401 0.69 +1.2
428,154 - MPMX26_00401 0.69 +0.6
428,154 - MPMX26_00401 0.69 +1.0
428,168 - MPMX26_00401 0.71 +0.5
428,168 - MPMX26_00401 0.71 +0.9
428,168 - MPMX26_00401 0.71 +0.8
428,204 - MPMX26_00401 0.77 +0.7
428,204 - MPMX26_00401 0.77 +0.6
428,204 - MPMX26_00401 0.77 -1.1
428,204 - MPMX26_00401 0.77 +0.9
428,204 - MPMX26_00401 0.77 +0.4
428,204 - MPMX26_00401 0.77 +0.9
428,209 - MPMX26_00401 0.78 +0.8
428,229 - MPMX26_00401 0.81 +1.3
428,246 - MPMX26_00401 0.84 +0.9
428,246 - MPMX26_00401 0.84 +0.7
428,246 - MPMX26_00401 0.84 +0.9
428,246 - MPMX26_00401 0.84 +1.1
428,255 - MPMX26_00401 0.86 -2.1
428,255 - MPMX26_00401 0.86 +0.9
428,273 - MPMX26_00401 0.89 +0.6
428,285 - +0.7
428,290 - +2.8
428,290 - +0.9
428,321 - +1.1
428,326 - -0.5
428,400 - MPMX26_00402 0.11 +1.1
428,403 - MPMX26_00402 0.11 +1.1
428,422 - MPMX26_00402 0.15 +0.5
428,477 - MPMX26_00402 0.24 -0.3
428,507 - MPMX26_00402 0.29 +1.1
428,515 - MPMX26_00402 0.30 +1.2
428,515 - MPMX26_00402 0.30 +1.2
428,515 - MPMX26_00402 0.30 +0.7
428,517 - MPMX26_00402 0.31 +1.3
428,522 - MPMX26_00402 0.31 +1.1
428,527 - MPMX26_00402 0.32 +2.1
428,527 - MPMX26_00402 0.32 +1.0
428,532 - MPMX26_00402 0.33 +2.3
428,532 - MPMX26_00402 0.33 +1.1
428,532 - MPMX26_00402 0.33 +0.9
428,532 - MPMX26_00402 0.33 +0.4
428,532 - MPMX26_00402 0.33 +1.2
428,601 - MPMX26_00402 0.45 +1.2

Or see this region's nucleotide sequence