Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00388 and MPMX26_00389 overlap by 8 nucleotides MPMX26_00389 and MPMX26_00390 overlap by 4 nucleotides MPMX26_00390 and MPMX26_00391 are separated by 48 nucleotides MPMX26_00391 and MPMX26_00392 overlap by 1 nucleotides MPMX26_00392 and MPMX26_00393 are separated by 71 nucleotides
MPMX26_00388: MPMX26_00388 - hypothetical protein, at 417,311 to 418,090
_00388
MPMX26_00389: MPMX26_00389 - Ubiquinone biosynthesis O-methyltransferase, mitochondrial, at 418,083 to 418,679
_00389
MPMX26_00390: MPMX26_00390 - hypothetical protein, at 418,676 to 419,347
_00390
MPMX26_00391: MPMX26_00391 - hypothetical protein, at 419,396 to 419,767
_00391
MPMX26_00392: MPMX26_00392 - hypothetical protein, at 419,767 to 420,153
_00392
MPMX26_00393: MPMX26_00393 - Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase, at 420,225 to 421,034
_00393
Position (kb) 418
419
420 Strain fitness (log2 ratio) -1
0
1
2 at 417.693 kb on + strand, within MPMX26_00388 at 417.761 kb on + strand, within MPMX26_00388 at 417.863 kb on + strand, within MPMX26_00388 at 417.863 kb on + strand, within MPMX26_00388 at 417.863 kb on + strand, within MPMX26_00388 at 417.863 kb on + strand, within MPMX26_00388 at 417.891 kb on + strand, within MPMX26_00388 at 417.898 kb on + strand, within MPMX26_00388 at 417.898 kb on + strand, within MPMX26_00388 at 418.094 kb on + strand at 418.136 kb on + strand at 418.136 kb on + strand at 418.146 kb on - strand, within MPMX26_00389 at 418.153 kb on + strand, within MPMX26_00389 at 418.161 kb on - strand, within MPMX26_00389 at 418.298 kb on + strand, within MPMX26_00389 at 418.477 kb on + strand, within MPMX26_00389 at 418.577 kb on + strand, within MPMX26_00389 at 418.599 kb on + strand, within MPMX26_00389 at 418.628 kb on + strand at 418.628 kb on + strand at 418.659 kb on + strand at 418.659 kb on + strand at 418.793 kb on + strand, within MPMX26_00390 at 418.798 kb on + strand, within MPMX26_00390 at 418.832 kb on - strand, within MPMX26_00390 at 418.841 kb on + strand, within MPMX26_00390 at 418.841 kb on + strand, within MPMX26_00390 at 418.872 kb on + strand, within MPMX26_00390 at 418.872 kb on + strand, within MPMX26_00390 at 418.872 kb on + strand, within MPMX26_00390 at 419.003 kb on + strand, within MPMX26_00390 at 419.635 kb on - strand, within MPMX26_00391 at 419.814 kb on - strand, within MPMX26_00392 at 419.814 kb on - strand, within MPMX26_00392 at 419.814 kb on - strand, within MPMX26_00392 at 419.821 kb on - strand, within MPMX26_00392 at 419.950 kb on - strand, within MPMX26_00392 at 419.950 kb on - strand, within MPMX26_00392 at 419.955 kb on - strand, within MPMX26_00392 at 419.955 kb on - strand, within MPMX26_00392 at 419.955 kb on - strand, within MPMX26_00392 at 419.985 kb on - strand, within MPMX26_00392 at 420.070 kb on - strand, within MPMX26_00392 at 420.082 kb on - strand, within MPMX26_00392
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 417,693 + MPMX26_00388 0.49 +0.3 417,761 + MPMX26_00388 0.58 +1.3 417,863 + MPMX26_00388 0.71 +0.7 417,863 + MPMX26_00388 0.71 +1.0 417,863 + MPMX26_00388 0.71 +0.4 417,863 + MPMX26_00388 0.71 +0.3 417,891 + MPMX26_00388 0.74 +0.1 417,898 + MPMX26_00388 0.75 +2.2 417,898 + MPMX26_00388 0.75 +1.2 418,094 + +0.4 418,136 + +0.3 418,136 + -0.7 418,146 - MPMX26_00389 0.11 -1.7 418,153 + MPMX26_00389 0.12 +0.3 418,161 - MPMX26_00389 0.13 +1.3 418,298 + MPMX26_00389 0.36 +0.2 418,477 + MPMX26_00389 0.66 -0.0 418,577 + MPMX26_00389 0.83 +0.0 418,599 + MPMX26_00389 0.86 -0.7 418,628 + +0.1 418,628 + -0.5 418,659 + -0.2 418,659 + +0.6 418,793 + MPMX26_00390 0.17 +0.1 418,798 + MPMX26_00390 0.18 +0.2 418,832 - MPMX26_00390 0.23 +0.3 418,841 + MPMX26_00390 0.25 +0.6 418,841 + MPMX26_00390 0.25 +0.5 418,872 + MPMX26_00390 0.29 +1.4 418,872 + MPMX26_00390 0.29 +0.5 418,872 + MPMX26_00390 0.29 +1.4 419,003 + MPMX26_00390 0.49 +0.5 419,635 - MPMX26_00391 0.64 +0.6 419,814 - MPMX26_00392 0.12 -1.3 419,814 - MPMX26_00392 0.12 +0.6 419,814 - MPMX26_00392 0.12 -0.3 419,821 - MPMX26_00392 0.14 +0.3 419,950 - MPMX26_00392 0.47 +0.1 419,950 - MPMX26_00392 0.47 +0.2 419,955 - MPMX26_00392 0.49 -1.5 419,955 - MPMX26_00392 0.49 -0.5 419,955 - MPMX26_00392 0.49 -0.5 419,985 - MPMX26_00392 0.56 +0.1 420,070 - MPMX26_00392 0.78 -1.3 420,082 - MPMX26_00392 0.81 -0.5
Or see this region's nucleotide sequence