Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00044 and MPMX26_00045 are separated by 65 nucleotides MPMX26_00045 and MPMX26_00046 are separated by 46 nucleotides MPMX26_00046 and MPMX26_00047 are separated by 208 nucleotides
MPMX26_00044: MPMX26_00044 - putative lipid II flippase MurJ, at 47,373 to 48,914
_00044
MPMX26_00045: MPMX26_00045 - Outer membrane protein MIP, at 48,980 to 49,669
_00045
MPMX26_00046: MPMX26_00046 - putative FKBP-type peptidyl-prolyl cis-trans isomerase FkpA, at 49,716 to 50,420
_00046
MPMX26_00047: MPMX26_00047 - Tyrosine-protein kinase ptk, at 50,629 to 52,812
_00047
Position (kb)
48
49
50 Strain fitness (log2 ratio)
-2
-1
0
1 at 48.886 kb on + strand at 48.909 kb on + strand at 48.919 kb on + strand at 48.958 kb on - strand at 49.008 kb on - strand at 49.019 kb on + strand at 49.033 kb on - strand at 49.033 kb on - strand at 49.041 kb on - strand at 49.067 kb on - strand, within MPMX26_00045 at 49.113 kb on - strand, within MPMX26_00045 at 49.123 kb on - strand, within MPMX26_00045 at 49.123 kb on - strand, within MPMX26_00045 at 49.123 kb on - strand, within MPMX26_00045 at 49.123 kb on - strand, within MPMX26_00045 at 49.123 kb on - strand, within MPMX26_00045 at 49.130 kb on - strand, within MPMX26_00045 at 49.130 kb on - strand, within MPMX26_00045 at 49.130 kb on - strand, within MPMX26_00045 at 49.131 kb on - strand, within MPMX26_00045 at 49.142 kb on - strand, within MPMX26_00045 at 49.185 kb on - strand, within MPMX26_00045 at 49.188 kb on - strand, within MPMX26_00045 at 49.188 kb on - strand, within MPMX26_00045 at 49.188 kb on - strand, within MPMX26_00045 at 49.198 kb on - strand, within MPMX26_00045 at 49.208 kb on - strand, within MPMX26_00045 at 49.208 kb on - strand, within MPMX26_00045 at 49.208 kb on - strand, within MPMX26_00045 at 49.229 kb on - strand, within MPMX26_00045 at 49.238 kb on - strand, within MPMX26_00045 at 49.238 kb on - strand, within MPMX26_00045 at 49.238 kb on - strand, within MPMX26_00045 at 49.238 kb on - strand, within MPMX26_00045 at 49.238 kb on - strand, within MPMX26_00045 at 49.238 kb on - strand, within MPMX26_00045 at 49.245 kb on - strand, within MPMX26_00045 at 49.297 kb on - strand, within MPMX26_00045 at 49.358 kb on - strand, within MPMX26_00045 at 49.358 kb on - strand, within MPMX26_00045 at 49.442 kb on - strand, within MPMX26_00045 at 49.442 kb on - strand, within MPMX26_00045 at 49.462 kb on - strand, within MPMX26_00045 at 49.480 kb on - strand, within MPMX26_00045 at 49.521 kb on - strand, within MPMX26_00045 at 49.521 kb on - strand, within MPMX26_00045 at 49.530 kb on - strand, within MPMX26_00045 at 49.530 kb on - strand, within MPMX26_00045 at 49.530 kb on - strand, within MPMX26_00045 at 49.548 kb on - strand, within MPMX26_00045 at 49.549 kb on - strand, within MPMX26_00045 at 49.549 kb on - strand, within MPMX26_00045 at 49.549 kb on - strand, within MPMX26_00045 at 49.555 kb on - strand, within MPMX26_00045 at 49.555 kb on - strand, within MPMX26_00045 at 49.555 kb on - strand, within MPMX26_00045 at 49.555 kb on - strand, within MPMX26_00045 at 49.555 kb on - strand, within MPMX26_00045 at 49.555 kb on - strand, within MPMX26_00045 at 49.572 kb on - strand, within MPMX26_00045 at 49.573 kb on - strand, within MPMX26_00045 at 49.574 kb on - strand, within MPMX26_00045 at 49.574 kb on - strand, within MPMX26_00045 at 49.574 kb on - strand, within MPMX26_00045 at 49.574 kb on - strand, within MPMX26_00045 at 49.609 kb on - strand at 49.621 kb on - strand at 49.621 kb on - strand at 49.621 kb on - strand at 49.621 kb on - strand at 49.645 kb on - strand at 49.645 kb on - strand at 49.693 kb on - strand at 49.693 kb on - strand at 49.698 kb on - strand at 49.702 kb on - strand at 49.731 kb on - strand at 49.731 kb on - strand at 49.731 kb on - strand at 49.731 kb on - strand at 49.731 kb on - strand at 49.731 kb on - strand at 49.763 kb on - strand at 49.766 kb on - strand at 49.785 kb on - strand at 49.785 kb on - strand at 49.785 kb on - strand at 49.785 kb on - strand at 49.790 kb on - strand, within MPMX26_00046 at 49.800 kb on - strand, within MPMX26_00046 at 49.810 kb on + strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.818 kb on - strand, within MPMX26_00046 at 49.823 kb on - strand, within MPMX26_00046 at 49.823 kb on - strand, within MPMX26_00046 at 49.823 kb on - strand, within MPMX26_00046 at 49.823 kb on - strand, within MPMX26_00046 at 49.823 kb on - strand, within MPMX26_00046 at 49.864 kb on - strand, within MPMX26_00046 at 49.864 kb on - strand, within MPMX26_00046 at 49.869 kb on - strand, within MPMX26_00046 at 49.898 kb on - strand, within MPMX26_00046 at 49.908 kb on - strand, within MPMX26_00046 at 49.912 kb on - strand, within MPMX26_00046 at 49.918 kb on - strand, within MPMX26_00046 at 49.921 kb on - strand, within MPMX26_00046 at 49.921 kb on - strand, within MPMX26_00046 at 49.931 kb on - strand, within MPMX26_00046 at 49.931 kb on - strand, within MPMX26_00046 at 49.949 kb on + strand, within MPMX26_00046 at 49.952 kb on - strand, within MPMX26_00046 at 49.959 kb on - strand, within MPMX26_00046 at 49.959 kb on - strand, within MPMX26_00046 at 49.964 kb on - strand, within MPMX26_00046 at 49.989 kb on - strand, within MPMX26_00046 at 49.989 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.004 kb on - strand, within MPMX26_00046 at 50.043 kb on - strand, within MPMX26_00046 at 50.043 kb on - strand, within MPMX26_00046 at 50.043 kb on - strand, within MPMX26_00046 at 50.043 kb on - strand, within MPMX26_00046 at 50.043 kb on - strand, within MPMX26_00046 at 50.048 kb on - strand, within MPMX26_00046 at 50.145 kb on - strand, within MPMX26_00046 at 50.145 kb on - strand, within MPMX26_00046 at 50.145 kb on - strand, within MPMX26_00046 at 50.161 kb on - strand, within MPMX26_00046 at 50.166 kb on - strand, within MPMX26_00046 at 50.166 kb on - strand, within MPMX26_00046 at 50.168 kb on - strand, within MPMX26_00046 at 50.168 kb on - strand, within MPMX26_00046 at 50.168 kb on - strand, within MPMX26_00046 at 50.171 kb on - strand, within MPMX26_00046 at 50.182 kb on - strand, within MPMX26_00046 at 50.184 kb on - strand, within MPMX26_00046 at 50.184 kb on - strand, within MPMX26_00046 at 50.184 kb on - strand, within MPMX26_00046 at 50.193 kb on - strand, within MPMX26_00046 at 50.199 kb on - strand, within MPMX26_00046 at 50.204 kb on - strand, within MPMX26_00046 at 50.204 kb on - strand, within MPMX26_00046 at 50.204 kb on - strand, within MPMX26_00046 at 50.266 kb on - strand, within MPMX26_00046 at 50.272 kb on - strand, within MPMX26_00046 at 50.272 kb on - strand, within MPMX26_00046 at 50.274 kb on - strand, within MPMX26_00046 at 50.274 kb on - strand, within MPMX26_00046 at 50.274 kb on - strand, within MPMX26_00046 at 50.274 kb on - strand, within MPMX26_00046 at 50.274 kb on - strand, within MPMX26_00046 at 50.279 kb on - strand, within MPMX26_00046 at 50.302 kb on - strand, within MPMX26_00046 at 50.326 kb on - strand, within MPMX26_00046 at 50.370 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.372 kb on - strand at 50.377 kb on - strand at 50.392 kb on - strand at 50.404 kb on - strand at 50.404 kb on - strand at 50.411 kb on - strand at 50.411 kb on - strand at 50.411 kb on - strand at 50.426 kb on - strand at 50.426 kb on - strand at 50.434 kb on - strand at 50.498 kb on - strand at 50.569 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 48,886 + -0.2 48,909 + +0.1 48,919 + -0.5 48,958 - -0.3 49,008 - -1.0 49,019 + -0.6 49,033 - -0.8 49,033 - -1.0 49,041 - -1.2 49,067 - MPMX26_00045 0.13 -1.0 49,113 - MPMX26_00045 0.19 -1.0 49,123 - MPMX26_00045 0.21 -0.9 49,123 - MPMX26_00045 0.21 -1.3 49,123 - MPMX26_00045 0.21 -1.1 49,123 - MPMX26_00045 0.21 -1.0 49,123 - MPMX26_00045 0.21 -1.1 49,130 - MPMX26_00045 0.22 -1.1 49,130 - MPMX26_00045 0.22 -0.9 49,130 - MPMX26_00045 0.22 -0.7 49,131 - MPMX26_00045 0.22 -1.0 49,142 - MPMX26_00045 0.23 -1.2 49,185 - MPMX26_00045 0.30 -0.7 49,188 - MPMX26_00045 0.30 -0.8 49,188 - MPMX26_00045 0.30 -1.0 49,188 - MPMX26_00045 0.30 -1.4 49,198 - MPMX26_00045 0.32 -0.7 49,208 - MPMX26_00045 0.33 -0.8 49,208 - MPMX26_00045 0.33 -1.0 49,208 - MPMX26_00045 0.33 -0.9 49,229 - MPMX26_00045 0.36 -1.3 49,238 - MPMX26_00045 0.37 -1.1 49,238 - MPMX26_00045 0.37 -1.0 49,238 - MPMX26_00045 0.37 -1.1 49,238 - MPMX26_00045 0.37 -0.8 49,238 - MPMX26_00045 0.37 -1.0 49,238 - MPMX26_00045 0.37 -0.9 49,245 - MPMX26_00045 0.38 -1.2 49,297 - MPMX26_00045 0.46 -1.2 49,358 - MPMX26_00045 0.55 -0.9 49,358 - MPMX26_00045 0.55 -0.7 49,442 - MPMX26_00045 0.67 -1.1 49,442 - MPMX26_00045 0.67 -0.9 49,462 - MPMX26_00045 0.70 -0.2 49,480 - MPMX26_00045 0.72 -1.0 49,521 - MPMX26_00045 0.78 -1.1 49,521 - MPMX26_00045 0.78 -1.3 49,530 - MPMX26_00045 0.80 -1.0 49,530 - MPMX26_00045 0.80 -0.8 49,530 - MPMX26_00045 0.80 -0.9 49,548 - MPMX26_00045 0.82 -1.0 49,549 - MPMX26_00045 0.82 -0.7 49,549 - MPMX26_00045 0.82 -1.1 49,549 - MPMX26_00045 0.82 -1.1 49,555 - MPMX26_00045 0.83 -0.8 49,555 - MPMX26_00045 0.83 -0.9 49,555 - MPMX26_00045 0.83 -1.1 49,555 - MPMX26_00045 0.83 -1.0 49,555 - MPMX26_00045 0.83 -0.9 49,555 - MPMX26_00045 0.83 -1.4 49,572 - MPMX26_00045 0.86 -1.1 49,573 - MPMX26_00045 0.86 -1.6 49,574 - MPMX26_00045 0.86 -1.3 49,574 - MPMX26_00045 0.86 -0.7 49,574 - MPMX26_00045 0.86 -1.0 49,574 - MPMX26_00045 0.86 -0.7 49,609 - -1.3 49,621 - -1.3 49,621 - -1.1 49,621 - -1.1 49,621 - -0.9 49,645 - -1.0 49,645 - -1.2 49,693 - -1.1 49,693 - -0.7 49,698 - -0.0 49,702 - -0.3 49,731 - -0.9 49,731 - -0.1 49,731 - -0.4 49,731 - -0.4 49,731 - -0.4 49,731 - -1.3 49,763 - -0.6 49,766 - -1.1 49,785 - -0.4 49,785 - -0.5 49,785 - +0.0 49,785 - -0.5 49,790 - MPMX26_00046 0.10 +0.1 49,800 - MPMX26_00046 0.12 -0.7 49,810 + MPMX26_00046 0.13 -0.7 49,818 - MPMX26_00046 0.14 -0.6 49,818 - MPMX26_00046 0.14 -0.2 49,818 - MPMX26_00046 0.14 -0.4 49,818 - MPMX26_00046 0.14 -1.0 49,818 - MPMX26_00046 0.14 -0.9 49,818 - MPMX26_00046 0.14 -0.6 49,818 - MPMX26_00046 0.14 -0.6 49,818 - MPMX26_00046 0.14 -0.7 49,818 - MPMX26_00046 0.14 -0.7 49,818 - MPMX26_00046 0.14 -1.1 49,818 - MPMX26_00046 0.14 -0.6 49,818 - MPMX26_00046 0.14 -0.4 49,818 - MPMX26_00046 0.14 -2.2 49,818 - MPMX26_00046 0.14 -0.6 49,823 - MPMX26_00046 0.15 -0.3 49,823 - MPMX26_00046 0.15 -0.1 49,823 - MPMX26_00046 0.15 -0.3 49,823 - MPMX26_00046 0.15 -0.6 49,823 - MPMX26_00046 0.15 -0.2 49,864 - MPMX26_00046 0.21 -0.6 49,864 - MPMX26_00046 0.21 -0.6 49,869 - MPMX26_00046 0.22 -0.8 49,898 - MPMX26_00046 0.26 -0.6 49,908 - MPMX26_00046 0.27 -0.8 49,912 - MPMX26_00046 0.28 -0.1 49,918 - MPMX26_00046 0.29 -0.5 49,921 - MPMX26_00046 0.29 -0.6 49,921 - MPMX26_00046 0.29 -0.4 49,931 - MPMX26_00046 0.30 -0.8 49,931 - MPMX26_00046 0.30 -0.2 49,949 + MPMX26_00046 0.33 -0.9 49,952 - MPMX26_00046 0.33 -0.4 49,959 - MPMX26_00046 0.34 -0.7 49,959 - MPMX26_00046 0.34 -0.4 49,964 - MPMX26_00046 0.35 -0.1 49,989 - MPMX26_00046 0.39 -0.5 49,989 - MPMX26_00046 0.39 -0.3 50,004 - MPMX26_00046 0.41 -0.6 50,004 - MPMX26_00046 0.41 -1.2 50,004 - MPMX26_00046 0.41 -0.4 50,004 - MPMX26_00046 0.41 -0.1 50,004 - MPMX26_00046 0.41 -0.4 50,004 - MPMX26_00046 0.41 -0.2 50,004 - MPMX26_00046 0.41 -0.6 50,004 - MPMX26_00046 0.41 -1.0 50,004 - MPMX26_00046 0.41 -0.2 50,004 - MPMX26_00046 0.41 -0.3 50,004 - MPMX26_00046 0.41 -0.3 50,004 - MPMX26_00046 0.41 -0.2 50,043 - MPMX26_00046 0.46 -0.4 50,043 - MPMX26_00046 0.46 -0.8 50,043 - MPMX26_00046 0.46 -0.6 50,043 - MPMX26_00046 0.46 -0.3 50,043 - MPMX26_00046 0.46 -0.4 50,048 - MPMX26_00046 0.47 -1.1 50,145 - MPMX26_00046 0.61 -0.4 50,145 - MPMX26_00046 0.61 -0.5 50,145 - MPMX26_00046 0.61 -0.1 50,161 - MPMX26_00046 0.63 -0.8 50,166 - MPMX26_00046 0.64 -0.4 50,166 - MPMX26_00046 0.64 -0.7 50,168 - MPMX26_00046 0.64 -0.5 50,168 - MPMX26_00046 0.64 -0.7 50,168 - MPMX26_00046 0.64 -0.3 50,171 - MPMX26_00046 0.65 -0.3 50,182 - MPMX26_00046 0.66 -0.6 50,184 - MPMX26_00046 0.66 -0.5 50,184 - MPMX26_00046 0.66 -0.9 50,184 - MPMX26_00046 0.66 -0.6 50,193 - MPMX26_00046 0.68 -2.0 50,199 - MPMX26_00046 0.69 -0.6 50,204 - MPMX26_00046 0.69 -1.7 50,204 - MPMX26_00046 0.69 -0.9 50,204 - MPMX26_00046 0.69 -0.6 50,266 - MPMX26_00046 0.78 -0.6 50,272 - MPMX26_00046 0.79 -0.4 50,272 - MPMX26_00046 0.79 -0.7 50,274 - MPMX26_00046 0.79 -0.8 50,274 - MPMX26_00046 0.79 -0.5 50,274 - MPMX26_00046 0.79 -0.3 50,274 - MPMX26_00046 0.79 -1.0 50,274 - MPMX26_00046 0.79 -0.5 50,279 - MPMX26_00046 0.80 -0.7 50,302 - MPMX26_00046 0.83 -0.8 50,326 - MPMX26_00046 0.87 -0.6 50,370 - -0.7 50,372 - -1.0 50,372 - -0.9 50,372 - -1.0 50,372 - -0.8 50,372 - -0.8 50,372 - -1.0 50,372 - -0.1 50,372 - -0.8 50,372 - -0.7 50,372 - -0.8 50,372 - -0.4 50,372 - -0.7 50,372 - -0.8 50,372 - -0.9 50,372 - -0.8 50,372 - -0.5 50,372 - -0.9 50,372 - -1.9 50,372 - -1.1 50,372 - -0.6 50,372 - -0.8 50,372 - -0.4 50,372 - -0.7 50,372 - -0.9 50,372 - -1.1 50,377 - -0.5 50,392 - -0.7 50,404 - -0.4 50,404 - -0.6 50,411 - -0.6 50,411 - -0.5 50,411 - -0.6 50,426 - -0.5 50,426 - -0.7 50,434 - -0.3 50,498 - +0.0 50,569 - +0.0
Or see this region's nucleotide sequence