Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04211

Experiment: amylopectin from maize 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize 2.5 mg/mL (C)
87,643	+				-0.9
87,643	+				-0.2
87,643	+				-3.0
87,644	-				+0.5
87,644	-				-1.4
87,648	+				-0.9
87,648	+				-0.9
87,689	+				+2.1
87,700	+				+2.2
87,819	+		BACOVA_04210	0.22	-2.2
87,820	-		BACOVA_04210	0.22	+0.0
87,825	+		BACOVA_04210	0.23	+0.2
87,842	-		BACOVA_04210	0.25	+0.4
87,880	+		BACOVA_04210	0.30	-0.1
87,880	+		BACOVA_04210	0.30	-0.3
87,880	+		BACOVA_04210	0.30	+0.8
87,881	-		BACOVA_04210	0.30	-0.4
87,881	-		BACOVA_04210	0.30	+0.6
87,973	+		BACOVA_04210	0.42	+2.5
87,973	+		BACOVA_04210	0.42	+2.5
87,974	-		BACOVA_04210	0.42	-0.5
87,974	-		BACOVA_04210	0.42	-3.9
87,976	-		BACOVA_04210	0.42	-1.5
88,043	-		BACOVA_04210	0.51	+2.1
88,043	-		BACOVA_04210	0.51	-2.1
88,043	-		BACOVA_04210	0.51	-2.3
88,045	-		BACOVA_04210	0.51	-1.3
88,048	-		BACOVA_04210	0.51	+1.1
88,092	-		BACOVA_04210	0.57	-0.0
88,092	-		BACOVA_04210	0.57	+2.2
88,126	+		BACOVA_04210	0.61	+4.3
88,127	-		BACOVA_04210	0.61	+0.4
88,159	+		BACOVA_04210	0.65	-2.0
88,159	+		BACOVA_04210	0.65	+0.9
88,159	+		BACOVA_04210	0.65	+1.1
88,159	+		BACOVA_04210	0.65	-0.5
88,160	-		BACOVA_04210	0.66	-0.6
88,270	+		BACOVA_04210	0.80	-1.9
88,270	+		BACOVA_04210	0.80	-1.3
88,278	+		BACOVA_04210	0.81	-0.6
88,278	+		BACOVA_04210	0.81	+0.6
88,467	+				-0.9
88,475	+				-0.9
88,489	+				-1.2
88,490	-				-2.5
88,490	-				-1.2
88,494	+				+0.4
88,495	-				-0.6
88,495	-				+0.7
88,496	+				-0.6
88,496	+				-2.1
88,510	-				+3.6
88,512	-				+1.9
88,512	-				-1.4
88,515	-				+1.8
88,515	-				-0.1
88,521	-				-1.0
88,540	+				-0.7
88,540	+				-1.3
88,540	+				-3.6
88,544	-				+0.0
88,549	-				-0.4
88,549	-				+0.4
88,550	+				-1.1
88,550	+				+2.7
88,551	-				-0.4
88,551	-				-1.9
88,599	-				+1.1
88,629	-				+1.3
88,629	-				-0.2
88,629	-				+0.1
88,629	-				-1.5
88,630	+				+0.7
88,631	-				-0.5
88,695	+				+1.8
88,695	+				+0.6
88,855	-		BACOVA_04211	0.11	-0.5
88,944	+		BACOVA_04211	0.16	-0.6
88,956	+		BACOVA_04211	0.17	+1.2
88,959	-		BACOVA_04211	0.17	+0.3
88,981	-		BACOVA_04211	0.18	+0.5
89,015	-		BACOVA_04211	0.20	+2.5
89,017	+		BACOVA_04211	0.20	-0.5
89,018	-		BACOVA_04211	0.20	-0.4
89,033	+		BACOVA_04211	0.21	+0.2
89,110	-		BACOVA_04211	0.25	-1.3
89,155	-		BACOVA_04211	0.27	+0.9
89,169	+		BACOVA_04211	0.28	+3.4
89,169	+		BACOVA_04211	0.28	+4.7
89,170	-		BACOVA_04211	0.28	-0.8
89,178	-		BACOVA_04211	0.29	-0.3
89,208	+		BACOVA_04211	0.30	+0.7
89,210	+		BACOVA_04211	0.30	+0.7
89,216	+		BACOVA_04211	0.31	-0.3
89,216	+		BACOVA_04211	0.31	-1.2
89,216	+		BACOVA_04211	0.31	-1.8
89,216	+		BACOVA_04211	0.31	-1.1
89,217	-		BACOVA_04211	0.31	+2.5
89,217	-		BACOVA_04211	0.31	-2.5
89,217	-		BACOVA_04211	0.31	+1.0
89,217	-		BACOVA_04211	0.31	+0.2
89,217	-		BACOVA_04211	0.31	-0.1
89,217	-		BACOVA_04211	0.31	-1.1
89,217	-		BACOVA_04211	0.31	+0.2
89,217	-		BACOVA_04211	0.31	-1.5
89,217	-		BACOVA_04211	0.31	-2.7
89,217	-		BACOVA_04211	0.31	+0.8
89,221	-		BACOVA_04211	0.31	+0.2
89,221	-		BACOVA_04211	0.31	-2.9
89,369	+		BACOVA_04211	0.39	-1.6
89,437	+		BACOVA_04211	0.43	+1.2
89,509	-		BACOVA_04211	0.46	-1.4
89,511	-		BACOVA_04211	0.46	+2.0
89,589	-		BACOVA_04211	0.51	-2.1
89,658	-		BACOVA_04211	0.54	+1.2
89,736	-		BACOVA_04211	0.59	+1.4
89,755	+		BACOVA_04211	0.60	-0.4
89,804	+		BACOVA_04211	0.62	-1.6
89,811	-		BACOVA_04211	0.63	-1.7
89,814	+		BACOVA_04211	0.63	-0.2
89,814	+		BACOVA_04211	0.63	+1.5
89,822	+		BACOVA_04211	0.63	-1.2
89,845	+		BACOVA_04211	0.64	+0.3
89,846	-		BACOVA_04211	0.64	-1.6
89,883	-		BACOVA_04211	0.66	+1.6
89,919	+		BACOVA_04211	0.68	-0.2
89,952	+		BACOVA_04211	0.70	-0.2
89,990	-		BACOVA_04211	0.72	+0.1
90,122	+		BACOVA_04211	0.79	-1.7
90,148	-		BACOVA_04211	0.81	-0.3
90,276	-		BACOVA_04211	0.87	+0.9
90,327	+				-1.3
90,328	-				+2.2
90,330	+				+0.2
90,341	+				+1.6
90,341	+				+0.8
90,341	+				+0.2
90,342	-				+0.7
90,364	-				-0.7
90,370	+				+1.2
90,370	+				+0.2
90,370	+				-0.1
90,371	-				-2.6
90,376	-				+0.4
90,376	-				-2.3
90,403	+				-0.7
90,487	+				+1.6
90,487	+				-1.8
90,488	-				+0.1
90,497	+				-0.2
90,497	+				+2.5
90,529	+				+3.1
90,529	+				+0.5
90,540	-				+1.5
90,610	+		BACOVA_04212	0.12	-0.1
90,611	-		BACOVA_04212	0.12	-0.3
90,611	-		BACOVA_04212	0.12	+0.9
90,613	-		BACOVA_04212	0.13	-2.8
90,613	-		BACOVA_04212	0.13	+1.4
90,788	+		BACOVA_04212	0.34	-1.1
90,826	+		BACOVA_04212	0.39	-0.6
90,831	-		BACOVA_04212	0.40	+0.5
90,831	-		BACOVA_04212	0.40	-0.5
90,853	+		BACOVA_04212	0.43	-0.1
90,853	+		BACOVA_04212	0.43	-0.2
90,900	+		BACOVA_04212	0.48	-0.9
90,900	+		BACOVA_04212	0.48	-0.1
90,901	-		BACOVA_04212	0.49	+0.4
90,916	+		BACOVA_04212	0.50	-1.9
90,916	+		BACOVA_04212	0.50	+0.5
91,000	+		BACOVA_04212	0.61	-1.0
91,033	+		BACOVA_04212	0.65	-1.7
91,039	-		BACOVA_04212	0.66	-0.7
91,071	+		BACOVA_04212	0.70	-2.4
91,072	-		BACOVA_04212	0.70	+0.2
91,168	+		BACOVA_04212	0.82	-1.9
91,200	-		BACOVA_04212	0.86	+0.1
91,263	+				-1.0
91,263	+				-1.4
91,264	-				+0.1
91,264	-				-0.5
91,294	+				-0.3
91,294	+				+0.3
91,295	-				+0.5
91,295	-				-0.5
91,352	+				+0.4
91,356	+				-0.7
91,363	+				+0.4
91,390	+				-0.6
91,411	-				-2.0
91,428	+				-1.2
91,431	-				+0.1
91,452	+				-2.4
91,470	+				-1.9
91,473	-				-0.9
91,473	-				+0.7
91,473	-				-1.7
91,479	+				+0.6
91,480	-				+0.3
91,483	-				-2.2