Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03060

Experiment: amylopectin from maize 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize 2.5 mg/mL (C)
129,567	-		BACOVA_03059	0.72	-1.1
129,593	-		BACOVA_03059	0.73	+0.4
129,593	-		BACOVA_03059	0.73	+0.0
129,613	+		BACOVA_03059	0.74	-0.6
129,614	-		BACOVA_03059	0.74	-2.0
129,685	+		BACOVA_03059	0.77	-1.8
129,688	+		BACOVA_03059	0.77	-0.8
129,778	+		BACOVA_03059	0.82	-1.7
129,803	-		BACOVA_03059	0.83	-0.3
129,805	+		BACOVA_03059	0.83	+1.9
129,809	-		BACOVA_03059	0.83	-1.9
129,809	-		BACOVA_03059	0.83	-0.7
129,809	-		BACOVA_03059	0.83	+1.7
129,817	+		BACOVA_03059	0.84	-1.1
129,827	+		BACOVA_03059	0.84	+1.0
129,863	+		BACOVA_03059	0.86	-2.3
129,907	-		BACOVA_03059	0.88	-2.2
129,968	+				+1.3
129,969	-				+0.4
129,973	+				+3.3
129,981	+				-0.6
130,035	+				-2.3
130,036	-				-2.7
130,067	-				+1.4
130,070	-				-0.1
130,070	-				-0.5
130,109	-				-2.5
130,224	-				+0.1
130,242	-				+0.1
130,327	+				-0.7
130,332	+				-1.2
130,334	+				+0.4
130,351	+				+2.3
130,428	-				-0.6
130,430	-				+1.2
130,430	-				+1.6
130,482	-				-1.0
130,484	+				-2.4
130,502	+				+1.0
130,502	+				-1.0
130,503	-				-0.9
130,511	+				-0.1
130,518	-				+1.5
130,529	+				+0.9
130,530	-				+0.1
130,550	-				-0.9
130,584	+				+1.0
130,585	-				+2.0
130,613	+				+1.9
130,613	+				+0.8
130,614	-				-0.3
130,614	-				+1.3
130,615	+				-0.6
130,615	+				+1.1
130,616	-				-1.0
130,629	-		BACOVA_03060	0.11	+0.2
130,695	-		BACOVA_03060	0.19	-2.2
130,719	-		BACOVA_03060	0.22	+0.7
130,740	+		BACOVA_03060	0.24	+1.8
130,740	+		BACOVA_03060	0.24	-1.1
130,741	-		BACOVA_03060	0.24	-0.6
130,742	+		BACOVA_03060	0.24	-0.3
130,742	+		BACOVA_03060	0.24	+0.5
130,743	-		BACOVA_03060	0.24	-0.9
130,745	+		BACOVA_03060	0.25	-0.8
130,746	-		BACOVA_03060	0.25	-1.4
130,746	-		BACOVA_03060	0.25	+0.1
130,748	+		BACOVA_03060	0.25	-0.2
130,840	-		BACOVA_03060	0.36	-0.1
130,857	-		BACOVA_03060	0.37	-2.0
130,859	-		BACOVA_03060	0.38	+0.3
130,859	-		BACOVA_03060	0.38	+1.1
130,859	-		BACOVA_03060	0.38	-1.6
130,859	-		BACOVA_03060	0.38	+4.0
130,884	-		BACOVA_03060	0.41	-0.9
130,970	+		BACOVA_03060	0.50	+2.2
130,971	-		BACOVA_03060	0.51	-1.0
130,979	+		BACOVA_03060	0.51	-0.5
131,048	+		BACOVA_03060	0.59	+2.5
131,049	-		BACOVA_03060	0.59	+3.7
131,109	-		BACOVA_03060	0.66	-1.1
131,202	-		BACOVA_03060	0.77	-0.6
131,202	-		BACOVA_03060	0.77	-1.8
131,215	+		BACOVA_03060	0.78	-0.6
131,337	+				-0.8
131,405	-				-1.4
131,422	+				+0.7
131,425	+				-0.6
131,434	+		BACOVA_03061	0.10	-1.2
131,434	+		BACOVA_03061	0.10	-0.2
131,434	+		BACOVA_03061	0.10	-0.5
131,445	+		BACOVA_03061	0.17	-1.8
131,454	+		BACOVA_03061	0.22	-0.3
131,455	-		BACOVA_03061	0.23	-0.9
131,469	+		BACOVA_03061	0.32	-1.0
131,501	+		BACOVA_03061	0.51	-0.4
131,503	+		BACOVA_03061	0.52	-1.8
131,504	-		BACOVA_03061	0.53	-1.4
131,507	+		BACOVA_03061	0.55	+1.5
131,509	+		BACOVA_03061	0.56	+0.1
131,510	-		BACOVA_03061	0.56	-0.2
131,562	+		BACOVA_03061	0.88	+0.4
131,569	+				-1.4
131,575	+				+0.9
131,576	-				+0.2
131,579	+				-1.6
131,579	+				+1.9
131,579	+				+2.4
131,588	+				+0.4
131,588	+				-2.3
131,609	+				+2.8
131,612	+				-0.0
131,613	-				+0.1
131,614	+				+0.1
131,617	+				-1.5
131,618	-				+0.6
131,622	+				-1.4
131,623	-				-0.6
131,654	+				-1.3
131,655	-				+0.9
131,655	-				-2.2
131,674	+				+0.7
131,675	-				+2.6
131,675	-				-0.7
131,720	+				-1.5
131,727	-				+0.8
131,742	+				-0.5
131,743	-				+1.9
131,743	-				-0.8
131,743	-				+1.9
131,749	+				+0.1
131,772	+				+2.8
131,849	-				+1.7
131,881	-		BACOVA_03062	0.11	-1.0
131,881	-		BACOVA_03062	0.11	-1.6
131,897	+		BACOVA_03062	0.12	+1.7
131,897	+		BACOVA_03062	0.12	+2.8
131,897	+		BACOVA_03062	0.12	+0.1
131,909	+		BACOVA_03062	0.13	-1.8
131,910	-		BACOVA_03062	0.13	-0.4
131,910	-		BACOVA_03062	0.13	+0.8
131,948	+		BACOVA_03062	0.15	+1.4
131,948	+		BACOVA_03062	0.15	+0.0
131,948	+		BACOVA_03062	0.15	-0.3
131,949	-		BACOVA_03062	0.15	-1.8
132,007	+		BACOVA_03062	0.18	+0.5
132,008	-		BACOVA_03062	0.18	-1.3
132,030	-		BACOVA_03062	0.19	+1.0
132,076	-		BACOVA_03062	0.22	-1.1
132,076	-		BACOVA_03062	0.22	-1.3
132,080	-		BACOVA_03062	0.22	-0.7
132,083	-		BACOVA_03062	0.22	-1.0
132,083	-		BACOVA_03062	0.22	-0.3
132,095	+		BACOVA_03062	0.23	-0.7
132,102	-		BACOVA_03062	0.23	-0.2
132,115	+		BACOVA_03062	0.24	-0.2
132,118	+		BACOVA_03062	0.24	+2.3
132,118	+		BACOVA_03062	0.24	+1.8
132,119	-		BACOVA_03062	0.24	+0.0
132,119	-		BACOVA_03062	0.24	+1.5
132,121	+		BACOVA_03062	0.24	-2.0
132,157	+		BACOVA_03062	0.26	+0.4
132,157	+		BACOVA_03062	0.26	+1.9
132,157	+		BACOVA_03062	0.26	+0.9
132,158	-		BACOVA_03062	0.26	+1.9
132,177	-		BACOVA_03062	0.27	-1.2
132,177	-		BACOVA_03062	0.27	-0.2
132,178	+		BACOVA_03062	0.27	+3.9
132,184	+		BACOVA_03062	0.28	+0.4
132,184	+		BACOVA_03062	0.28	-0.8
132,204	-		BACOVA_03062	0.29	-0.1
132,212	+		BACOVA_03062	0.29	+0.4
132,215	+		BACOVA_03062	0.29	-0.3
132,215	+		BACOVA_03062	0.29	-0.8
132,216	-		BACOVA_03062	0.30	+0.4
132,216	-		BACOVA_03062	0.30	-2.4
132,217	+		BACOVA_03062	0.30	+1.9
132,218	-		BACOVA_03062	0.30	-0.5
132,218	-		BACOVA_03062	0.30	-1.1
132,219	+		BACOVA_03062	0.30	-1.8
132,219	+		BACOVA_03062	0.30	+0.8
132,303	-		BACOVA_03062	0.34	-0.9
132,364	+		BACOVA_03062	0.38	+0.5
132,365	-		BACOVA_03062	0.38	+0.3
132,365	-		BACOVA_03062	0.38	-0.1
132,365	-		BACOVA_03062	0.38	-0.8
132,365	-		BACOVA_03062	0.38	-0.0
132,365	-		BACOVA_03062	0.38	+0.8
132,373	-		BACOVA_03062	0.38	-1.3
132,394	+		BACOVA_03062	0.39	+1.1