Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00885

Experiment: amylopectin from maize 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize 2.5 mg/mL (C)
5,715	-		BACOVA_00884	0.23	+0.7
5,715	-		BACOVA_00884	0.23	+1.1
5,735	-		BACOVA_00884	0.25	-0.8
5,761	+		BACOVA_00884	0.27	-1.3
5,762	-		BACOVA_00884	0.27	-0.8
5,772	-		BACOVA_00884	0.28	+1.3
5,774	-		BACOVA_00884	0.28	-1.9
5,867	-		BACOVA_00884	0.36	+1.5
5,867	-		BACOVA_00884	0.36	+1.5
5,877	+		BACOVA_00884	0.36	-0.1
5,883	+		BACOVA_00884	0.37	+1.1
5,884	-		BACOVA_00884	0.37	+3.7
5,884	-		BACOVA_00884	0.37	+3.7
5,890	-		BACOVA_00884	0.37	+1.3
5,910	-		BACOVA_00884	0.39	-2.5
5,912	-		BACOVA_00884	0.39	+2.5
5,931	-		BACOVA_00884	0.41	-0.1
6,004	-		BACOVA_00884	0.47	-1.1
6,006	+		BACOVA_00884	0.47	-0.1
6,030	+		BACOVA_00884	0.49	-0.2
6,054	+		BACOVA_00884	0.51	+0.5
6,055	-		BACOVA_00884	0.51	+2.2
6,055	-		BACOVA_00884	0.51	+0.7
6,138	-		BACOVA_00884	0.58	-0.0
6,205	-		BACOVA_00884	0.63	+2.7
6,256	+		BACOVA_00884	0.68	+0.2
6,264	+		BACOVA_00884	0.68	+0.7
6,294	+		BACOVA_00884	0.71	-1.1
6,340	-		BACOVA_00884	0.74	+1.8
6,397	-		BACOVA_00884	0.79	-1.2
6,403	+		BACOVA_00884	0.80	-0.6
6,404	-		BACOVA_00884	0.80	-0.0
6,407	+		BACOVA_00884	0.80	-1.4
6,407	+		BACOVA_00884	0.80	-0.3
6,407	+		BACOVA_00884	0.80	-0.1
6,407	+		BACOVA_00884	0.80	-0.9
6,408	-		BACOVA_00884	0.80	+0.6
6,408	-		BACOVA_00884	0.80	+0.7
6,438	+		BACOVA_00884	0.83	-0.7
6,439	-		BACOVA_00884	0.83	-0.2
6,477	-		BACOVA_00884	0.86	+2.8
6,506	-		BACOVA_00884	0.88	-1.1
6,506	-		BACOVA_00884	0.88	-0.1
6,510	-		BACOVA_00884	0.88	-0.3
6,541	-				+3.0
6,541	-				+0.8
6,580	+				-0.4
6,581	-				+3.4
6,581	-				-1.1
6,587	-				+3.3
6,607	-				+2.2
6,607	-				+1.7
6,612	+				-1.1
6,613	-				+1.1
6,613	-				-0.6
6,648	-				-0.7
6,653	-				-0.7
6,656	-				+0.7
6,660	+				+2.1
6,660	+				-1.4
6,660	+				-0.7
6,672	+				-0.3
6,673	-				+0.7
6,689	-				+1.6
6,696	-				+0.4
6,700	+				-1.7
6,724	-				+0.6
6,733	-				-1.8
6,748	+				-0.0
6,769	-				-0.3
6,859	+				-2.4
6,859	+				-2.9
6,860	-				+0.3
6,860	-				+4.4
6,865	-				+0.2
6,865	-				-0.7
6,868	+				+0.7
6,868	+				-0.1
6,868	+				+1.4
6,869	-				-0.9
6,869	-				+1.5
6,931	+				+2.3
6,941	-				+3.0
6,945	+				+1.2
6,972	-				-2.4
6,989	-				+1.4
7,072	+		BACOVA_00885	0.11	+1.1
7,075	+		BACOVA_00885	0.11	-2.1
7,076	-		BACOVA_00885	0.11	-0.3
7,084	+		BACOVA_00885	0.11	-1.9
7,085	-		BACOVA_00885	0.11	-0.4
7,090	+		BACOVA_00885	0.12	+3.1
7,109	-		BACOVA_00885	0.12	-0.8
7,140	+		BACOVA_00885	0.13	+0.5
7,176	+		BACOVA_00885	0.14	-1.7
7,210	+		BACOVA_00885	0.15	-0.7
7,211	-		BACOVA_00885	0.15	+1.2
7,211	-		BACOVA_00885	0.15	+1.5
7,211	-		BACOVA_00885	0.15	+1.1
7,211	-		BACOVA_00885	0.15	+2.3
7,234	+		BACOVA_00885	0.16	-1.2
7,286	-		BACOVA_00885	0.17	-2.1
7,286	-		BACOVA_00885	0.17	-1.0
7,286	-		BACOVA_00885	0.17	+0.6
7,286	-		BACOVA_00885	0.17	-0.1
7,294	-		BACOVA_00885	0.18	-0.9
7,298	-		BACOVA_00885	0.18	-0.6
7,298	-		BACOVA_00885	0.18	-1.3
7,368	+		BACOVA_00885	0.20	+2.7
7,369	-		BACOVA_00885	0.20	+0.3
7,415	-		BACOVA_00885	0.21	-0.8
7,457	+		BACOVA_00885	0.23	-0.1
7,457	+		BACOVA_00885	0.23	-0.9
7,532	-		BACOVA_00885	0.25	+0.7
7,553	-		BACOVA_00885	0.25	-0.5
7,553	-		BACOVA_00885	0.25	+0.6
7,587	+		BACOVA_00885	0.26	+2.0
7,588	-		BACOVA_00885	0.26	-1.2
7,590	-		BACOVA_00885	0.26	+1.7
7,590	-		BACOVA_00885	0.26	+1.0
7,651	+		BACOVA_00885	0.28	+0.4
7,651	+		BACOVA_00885	0.28	-1.4
7,652	-		BACOVA_00885	0.28	-0.5
7,652	-		BACOVA_00885	0.28	-0.1
7,652	-		BACOVA_00885	0.28	+1.2
7,652	-		BACOVA_00885	0.28	+1.1
7,655	+		BACOVA_00885	0.28	+0.4
7,655	+		BACOVA_00885	0.28	+0.3
7,655	+		BACOVA_00885	0.28	+0.5
7,655	+		BACOVA_00885	0.28	+2.9
7,656	-		BACOVA_00885	0.28	-1.0
7,656	-		BACOVA_00885	0.28	-1.2
7,656	-		BACOVA_00885	0.28	+0.6
7,673	-		BACOVA_00885	0.29	+0.5
7,687	-		BACOVA_00885	0.29	-1.0
7,690	+		BACOVA_00885	0.29	-0.4
7,693	+		BACOVA_00885	0.30	-1.2
7,694	-		BACOVA_00885	0.30	+2.5
7,730	+		BACOVA_00885	0.31	+1.4
7,774	+		BACOVA_00885	0.32	+1.7
7,774	+		BACOVA_00885	0.32	-0.3
7,774	+		BACOVA_00885	0.32	+1.3
7,775	-		BACOVA_00885	0.32	-1.4
7,807	-		BACOVA_00885	0.33	-1.3
7,843	+		BACOVA_00885	0.34	+0.2
7,877	+		BACOVA_00885	0.35	-1.4
7,881	-		BACOVA_00885	0.35	+2.5
7,882	+		BACOVA_00885	0.35	-0.5
7,882	+		BACOVA_00885	0.35	+3.2
7,882	+		BACOVA_00885	0.35	-1.8
7,882	+		BACOVA_00885	0.35	-0.1
7,883	-		BACOVA_00885	0.35	+0.3
7,883	-		BACOVA_00885	0.35	+0.1
7,889	+		BACOVA_00885	0.35	+1.5
7,912	-		BACOVA_00885	0.36	-0.2
7,916	-		BACOVA_00885	0.36	+2.5
7,958	-		BACOVA_00885	0.37	+1.3
7,966	+		BACOVA_00885	0.38	+1.1
7,967	-		BACOVA_00885	0.38	+1.1
7,971	-		BACOVA_00885	0.38	-0.6
8,020	+		BACOVA_00885	0.39	-0.4
8,020	+		BACOVA_00885	0.39	-1.0
8,021	-		BACOVA_00885	0.39	+2.1
8,021	-		BACOVA_00885	0.39	-0.0
8,056	+		BACOVA_00885	0.40	+0.4
8,057	-		BACOVA_00885	0.40	+1.0
8,063	+		BACOVA_00885	0.41	+2.2
8,066	-		BACOVA_00885	0.41	+0.1
8,109	+		BACOVA_00885	0.42	-1.7
8,110	-		BACOVA_00885	0.42	-1.6
8,118	-		BACOVA_00885	0.42	-0.1
8,118	-		BACOVA_00885	0.42	-0.4
8,122	-		BACOVA_00885	0.42	+1.5
8,122	-		BACOVA_00885	0.42	-0.7
8,135	-		BACOVA_00885	0.43	+0.6
8,204	+		BACOVA_00885	0.45	-1.0
8,207	-		BACOVA_00885	0.45	+0.7
8,270	-		BACOVA_00885	0.47	-0.1
8,280	-		BACOVA_00885	0.47	-0.5
8,280	-		BACOVA_00885	0.47	+3.6
8,297	-		BACOVA_00885	0.48	-0.2
8,300	+		BACOVA_00885	0.48	+1.4
8,315	+		BACOVA_00885	0.48	-1.4
8,316	-		BACOVA_00885	0.48	+0.2
8,316	-		BACOVA_00885	0.48	-0.4
8,333	-		BACOVA_00885	0.49	-1.8
8,333	-		BACOVA_00885	0.49	-0.1
8,440	+		BACOVA_00885	0.52	-1.3
8,441	-		BACOVA_00885	0.52	+0.0
8,447	-		BACOVA_00885	0.52	+2.7
8,452	+		BACOVA_00885	0.52	+2.5
8,453	-		BACOVA_00885	0.52	+0.2
8,465	+		BACOVA_00885	0.53	+0.5
8,467	+		BACOVA_00885	0.53	+0.3
8,471	-		BACOVA_00885	0.53	-0.2
8,489	+		BACOVA_00885	0.53	-0.3
8,542	+		BACOVA_00885	0.55	+1.0
8,543	-		BACOVA_00885	0.55	-0.3
8,665	+		BACOVA_00885	0.59	-0.8
8,682	+		BACOVA_00885	0.59	+0.6
8,687	-		BACOVA_00885	0.59	-0.6
8,687	-		BACOVA_00885	0.59	+1.5
8,687	-		BACOVA_00885	0.59	-1.5
8,731	-		BACOVA_00885	0.60	-1.6
8,748	-		BACOVA_00885	0.61	-0.3
8,748	-		BACOVA_00885	0.61	-1.5
8,748	-		BACOVA_00885	0.61	+1.7
8,761	+		BACOVA_00885	0.61	-2.8
8,761	+		BACOVA_00885	0.61	-1.9
8,762	-		BACOVA_00885	0.61	+0.6
8,765	+		BACOVA_00885	0.61	+0.3
8,766	-		BACOVA_00885	0.62	-1.9
8,766	-		BACOVA_00885	0.62	-0.7
8,784	+		BACOVA_00885	0.62	-0.9
8,860	+		BACOVA_00885	0.64	-0.7
8,867	-		BACOVA_00885	0.65	-0.7
8,867	-		BACOVA_00885	0.65	+0.9
8,887	+		BACOVA_00885	0.65	-0.7
8,896	+		BACOVA_00885	0.65	+2.9
8,898	+		BACOVA_00885	0.65	+2.9
8,903	-		BACOVA_00885	0.66	+0.3
8,924	+		BACOVA_00885	0.66	+3.6
8,925	-		BACOVA_00885	0.66	+2.0
8,958	-		BACOVA_00885	0.67	-0.2
8,999	+		BACOVA_00885	0.68	-0.7
8,999	+		BACOVA_00885	0.68	+0.6
9,001	+		BACOVA_00885	0.69	+2.2
9,001	+		BACOVA_00885	0.69	+0.3
9,002	-		BACOVA_00885	0.69	+0.2
9,003	+		BACOVA_00885	0.69	+3.3
9,022	-		BACOVA_00885	0.69	-1.6
9,034	-		BACOVA_00885	0.69	+0.8
9,068	-		BACOVA_00885	0.71	+0.9
9,134	+		BACOVA_00885	0.72	+0.2
9,134	+		BACOVA_00885	0.72	-0.7
9,135	-		BACOVA_00885	0.73	+1.8
9,135	-		BACOVA_00885	0.73	-1.1
9,137	-		BACOVA_00885	0.73	+0.1
9,193	+		BACOVA_00885	0.74	-2.4
9,194	-		BACOVA_00885	0.74	-0.4
9,198	-		BACOVA_00885	0.74	-1.5
9,206	-		BACOVA_00885	0.75	-0.0
9,208	+		BACOVA_00885	0.75	-2.3
9,209	-		BACOVA_00885	0.75	+0.4
9,241	-		BACOVA_00885	0.76	+0.7
9,256	+		BACOVA_00885	0.76	-2.5
9,261	-		BACOVA_00885	0.76	+2.4
9,310	+		BACOVA_00885	0.78	+0.4
9,351	-		BACOVA_00885	0.79	-0.6
9,351	-		BACOVA_00885	0.79	-0.1
9,375	-		BACOVA_00885	0.80	+2.5
9,376	+		BACOVA_00885	0.80	-0.2
9,487	-		BACOVA_00885	0.83	-1.9
9,509	-		BACOVA_00885	0.84	+0.1
9,547	+		BACOVA_00885	0.85	-1.1
9,549	+		BACOVA_00885	0.85	+3.3
9,582	+		BACOVA_00885	0.86	-2.0
9,583	-		BACOVA_00885	0.86	+0.5
9,593	-		BACOVA_00885	0.86	+0.8
9,607	+		BACOVA_00885	0.87	-1.2
9,689	+		BACOVA_00885	0.89	+1.6
9,690	-		BACOVA_00885	0.89	-0.7
9,690	-		BACOVA_00885	0.89	-0.5
9,729	+				+0.1
9,730	-				-0.9
9,750	+				-1.3
9,790	-				+1.9
9,790	-				+0.6
9,800	-				-0.2
9,806	-				+0.3
9,808	+				+0.5
9,808	+				-0.1
9,827	-				+0.9
9,986	-				+0.3
10,091	+				-0.9
10,091	+				-1.1
10,109	+				-0.7
10,110	-				-0.7
10,209	+		BACOVA_00886	0.12	+1.5
10,224	+		BACOVA_00886	0.13	-0.7
10,224	+		BACOVA_00886	0.13	+0.4
10,226	+		BACOVA_00886	0.13	+0.1
10,283	+		BACOVA_00886	0.17	-0.2
10,283	+		BACOVA_00886	0.17	+1.7
10,284	-		BACOVA_00886	0.17	-0.8
10,284	-		BACOVA_00886	0.17	-0.8
10,284	-		BACOVA_00886	0.17	-0.7
10,284	-		BACOVA_00886	0.17	+0.8
10,284	-		BACOVA_00886	0.17	-0.4
10,302	-		BACOVA_00886	0.18	+1.1
10,302	-		BACOVA_00886	0.18	+0.1
10,303	+		BACOVA_00886	0.18	+1.0
10,339	-		BACOVA_00886	0.20	-1.3
10,344	+		BACOVA_00886	0.21	-1.7
10,345	-		BACOVA_00886	0.21	+1.3
10,371	+		BACOVA_00886	0.22	+0.3
10,372	-		BACOVA_00886	0.22	-0.3
10,404	+		BACOVA_00886	0.24	-0.4
10,405	-		BACOVA_00886	0.24	-0.3
10,425	+		BACOVA_00886	0.26	+1.0
10,426	-		BACOVA_00886	0.26	+2.6
10,430	+		BACOVA_00886	0.26	-2.4
10,430	+		BACOVA_00886	0.26	+3.5
10,431	-		BACOVA_00886	0.26	-1.1
10,440	+		BACOVA_00886	0.27	-0.9
10,441	-		BACOVA_00886	0.27	+1.6
10,441	-		BACOVA_00886	0.27	-0.1
10,444	-		BACOVA_00886	0.27	-1.6
10,474	-		BACOVA_00886	0.29	-1.4
10,474	-		BACOVA_00886	0.29	+0.2
10,486	+		BACOVA_00886	0.30	-0.4
10,494	+		BACOVA_00886	0.30	-2.9
10,527	+		BACOVA_00886	0.32	-1.9
10,543	+		BACOVA_00886	0.33	+1.6
10,544	-		BACOVA_00886	0.33	+2.0
10,566	+		BACOVA_00886	0.35	-1.9
10,566	+		BACOVA_00886	0.35	+0.1
10,566	+		BACOVA_00886	0.35	-2.5
10,567	-		BACOVA_00886	0.35	+0.5
10,567	-		BACOVA_00886	0.35	+0.2
10,568	+		BACOVA_00886	0.35	+0.1
10,569	-		BACOVA_00886	0.35	+0.0
10,569	-		BACOVA_00886	0.35	+0.4
10,569	-		BACOVA_00886	0.35	-0.9
10,570	+		BACOVA_00886	0.35	+0.0
10,571	-		BACOVA_00886	0.35	+0.0
10,571	-		BACOVA_00886	0.35	-0.8
10,602	+		BACOVA_00886	0.37	+1.5
10,618	+		BACOVA_00886	0.38	-0.6
10,618	+		BACOVA_00886	0.38	+0.7
10,619	-		BACOVA_00886	0.38	+1.4
10,639	+		BACOVA_00886	0.39	+0.3
10,728	+		BACOVA_00886	0.45	+0.4
10,729	-		BACOVA_00886	0.45	-0.0
10,765	-		BACOVA_00886	0.47	-0.7
10,765	-		BACOVA_00886	0.47	+2.1
10,799	-		BACOVA_00886	0.49	-0.4
10,815	+		BACOVA_00886	0.50	-0.0
10,816	-		BACOVA_00886	0.50	-0.7
10,908	+		BACOVA_00886	0.56	+0.4
10,909	-		BACOVA_00886	0.56	+0.6
10,909	-		BACOVA_00886	0.56	+2.6
10,930	+		BACOVA_00886	0.58	+2.3
10,931	-		BACOVA_00886	0.58	-0.7
10,940	+		BACOVA_00886	0.58	-0.4
10,948	-		BACOVA_00886	0.59	-1.0
10,951	+		BACOVA_00886	0.59	-0.4
10,951	+		BACOVA_00886	0.59	-0.3
10,953	+		BACOVA_00886	0.59	+2.1
10,954	-		BACOVA_00886	0.59	-0.1
10,963	-		BACOVA_00886	0.60	-0.8
10,968	+		BACOVA_00886	0.60	+1.7
10,969	-		BACOVA_00886	0.60	+1.5
10,969	-		BACOVA_00886	0.60	-1.1
10,985	+		BACOVA_00886	0.61	-0.2
10,985	+		BACOVA_00886	0.61	-0.4
10,985	+		BACOVA_00886	0.61	-1.1
10,986	-		BACOVA_00886	0.61	-0.1
11,005	-		BACOVA_00886	0.62	-0.3
11,006	+		BACOVA_00886	0.63	-1.5
11,006	+		BACOVA_00886	0.63	-0.1
11,006	+		BACOVA_00886	0.63	-1.3
11,007	-		BACOVA_00886	0.63	-0.7
11,015	+		BACOVA_00886	0.63	+0.7
11,017	+		BACOVA_00886	0.63	+1.0