Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03096 and MPMX26_03097 are separated by 86 nucleotides MPMX26_03097 and MPMX26_03098 overlap by 11 nucleotides
MPMX26_03096: MPMX26_03096 - Metal cation efflux system protein CzcD, at 8,491 to 9,390
_03096
MPMX26_03097: MPMX26_03097 - Cobalt-zinc-cadmium resistance protein CzcA, at 9,477 to 12,635
_03097
MPMX26_03098: MPMX26_03098 - Cobalt-zinc-cadmium resistance protein CzcB, at 12,625 to 13,875
_03098
Position (kb) 9
10
11
12
13 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 8.496 kb on - strand at 8.521 kb on - strand at 8.751 kb on - strand, within MPMX26_03096 at 9.118 kb on - strand, within MPMX26_03096 at 9.410 kb on + strand at 9.537 kb on - strand at 9.542 kb on - strand at 9.542 kb on - strand at 9.547 kb on - strand at 9.588 kb on - strand at 9.588 kb on - strand at 9.593 kb on - strand at 9.593 kb on - strand at 9.631 kb on - strand at 9.631 kb on - strand at 9.662 kb on - strand at 9.664 kb on + strand at 9.667 kb on - strand at 9.695 kb on - strand at 9.705 kb on - strand at 9.716 kb on - strand at 9.749 kb on - strand at 9.754 kb on - strand at 9.777 kb on - strand at 9.802 kb on + strand, within MPMX26_03097 at 9.815 kb on - strand, within MPMX26_03097 at 9.815 kb on - strand, within MPMX26_03097 at 9.879 kb on - strand, within MPMX26_03097 at 10.254 kb on - strand, within MPMX26_03097 at 10.367 kb on - strand, within MPMX26_03097 at 10.372 kb on + strand, within MPMX26_03097 at 10.380 kb on - strand, within MPMX26_03097 at 10.380 kb on - strand, within MPMX26_03097 at 10.380 kb on - strand, within MPMX26_03097 at 10.380 kb on - strand, within MPMX26_03097 at 10.380 kb on - strand, within MPMX26_03097 at 10.380 kb on - strand, within MPMX26_03097 at 10.380 kb on - strand, within MPMX26_03097 at 10.380 kb on - strand, within MPMX26_03097 at 10.380 kb on - strand, within MPMX26_03097 at 10.412 kb on - strand, within MPMX26_03097 at 10.412 kb on - strand, within MPMX26_03097 at 10.412 kb on - strand, within MPMX26_03097 at 10.424 kb on - strand, within MPMX26_03097 at 11.186 kb on - strand, within MPMX26_03097 at 11.475 kb on - strand, within MPMX26_03097 at 11.622 kb on - strand, within MPMX26_03097 at 11.622 kb on - strand, within MPMX26_03097 at 11.733 kb on - strand, within MPMX26_03097 at 11.992 kb on - strand, within MPMX26_03097 at 12.275 kb on + strand, within MPMX26_03097 at 12.467 kb on - strand at 12.705 kb on + strand at 12.713 kb on - strand at 13.018 kb on - strand, within MPMX26_03098 at 13.018 kb on - strand, within MPMX26_03098 at 13.113 kb on - strand, within MPMX26_03098 at 13.236 kb on - strand, within MPMX26_03098
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 8,496 - +0.0 8,521 - +0.0 8,751 - MPMX26_03096 0.29 -0.5 9,118 - MPMX26_03096 0.70 -0.3 9,410 + -1.3 9,537 - +0.4 9,542 - -0.5 9,542 - +0.7 9,547 - +3.0 9,588 - +1.0 9,588 - -0.2 9,593 - -1.4 9,593 - -0.5 9,631 - -1.8 9,631 - -0.2 9,662 - -1.7 9,664 + -2.1 9,667 - +0.3 9,695 - -2.0 9,705 - +1.6 9,716 - +2.0 9,749 - -0.7 9,754 - +0.5 9,777 - -1.4 9,802 + MPMX26_03097 0.10 -1.3 9,815 - MPMX26_03097 0.11 +1.0 9,815 - MPMX26_03097 0.11 +0.0 9,879 - MPMX26_03097 0.13 -0.3 10,254 - MPMX26_03097 0.25 +0.5 10,367 - MPMX26_03097 0.28 -0.5 10,372 + MPMX26_03097 0.28 +0.4 10,380 - MPMX26_03097 0.29 -0.8 10,380 - MPMX26_03097 0.29 -0.3 10,380 - MPMX26_03097 0.29 -0.8 10,380 - MPMX26_03097 0.29 +0.0 10,380 - MPMX26_03097 0.29 -0.3 10,380 - MPMX26_03097 0.29 +0.8 10,380 - MPMX26_03097 0.29 -0.3 10,380 - MPMX26_03097 0.29 -0.8 10,380 - MPMX26_03097 0.29 -0.7 10,412 - MPMX26_03097 0.30 +1.0 10,412 - MPMX26_03097 0.30 +0.3 10,412 - MPMX26_03097 0.30 +0.3 10,424 - MPMX26_03097 0.30 +0.0 11,186 - MPMX26_03097 0.54 +0.5 11,475 - MPMX26_03097 0.63 -0.2 11,622 - MPMX26_03097 0.68 +0.7 11,622 - MPMX26_03097 0.68 -0.7 11,733 - MPMX26_03097 0.71 -0.2 11,992 - MPMX26_03097 0.80 -0.5 12,275 + MPMX26_03097 0.89 -2.7 12,467 - +1.8 12,705 + +0.5 12,713 - +0.0 13,018 - MPMX26_03098 0.31 -0.4 13,018 - MPMX26_03098 0.31 +1.0 13,113 - MPMX26_03098 0.39 +0.0 13,236 - MPMX26_03098 0.49 -0.4
Or see this region's nucleotide sequence