Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03022 and MPMX26_03023 are separated by 89 nucleotides MPMX26_03023 and MPMX26_03024 are separated by 8 nucleotides MPMX26_03024 and MPMX26_03025 are separated by 536 nucleotides
MPMX26_03022: MPMX26_03022 - Zinc transporter ZupT, at 3,141,319 to 3,142,128
_03022
MPMX26_03023: MPMX26_03023 - hypothetical protein, at 3,142,218 to 3,142,346
_03023
MPMX26_03024: MPMX26_03024 - hypothetical protein, at 3,142,355 to 3,143,833
_03024
MPMX26_03025: MPMX26_03025 - hypothetical protein, at 3,144,370 to 3,145,062
_03025
Position (kb)
3142
3143
3144 Strain fitness (log2 ratio)
-1
0
1 at 3141.754 kb on + strand, within MPMX26_03022 at 3141.999 kb on - strand, within MPMX26_03022 at 3142.047 kb on - strand, within MPMX26_03022 at 3142.049 kb on + strand at 3142.057 kb on - strand at 3142.203 kb on - strand at 3142.203 kb on - strand at 3142.233 kb on - strand, within MPMX26_03023 at 3142.320 kb on - strand, within MPMX26_03023 at 3142.349 kb on - strand at 3142.359 kb on - strand at 3142.359 kb on - strand at 3142.361 kb on - strand at 3142.361 kb on - strand at 3142.361 kb on - strand at 3142.377 kb on - strand at 3142.377 kb on - strand at 3142.387 kb on - strand at 3142.389 kb on - strand at 3142.396 kb on - strand at 3142.408 kb on - strand at 3142.410 kb on - strand at 3142.410 kb on - strand at 3142.443 kb on - strand at 3142.494 kb on - strand at 3142.502 kb on - strand at 3142.502 kb on - strand at 3142.515 kb on - strand, within MPMX26_03024 at 3142.515 kb on - strand, within MPMX26_03024 at 3142.555 kb on - strand, within MPMX26_03024 at 3142.560 kb on - strand, within MPMX26_03024 at 3142.613 kb on - strand, within MPMX26_03024 at 3142.613 kb on - strand, within MPMX26_03024 at 3142.613 kb on - strand, within MPMX26_03024 at 3142.642 kb on - strand, within MPMX26_03024 at 3142.691 kb on - strand, within MPMX26_03024 at 3142.728 kb on - strand, within MPMX26_03024 at 3142.789 kb on - strand, within MPMX26_03024 at 3142.798 kb on - strand, within MPMX26_03024 at 3142.824 kb on - strand, within MPMX26_03024 at 3142.836 kb on - strand, within MPMX26_03024 at 3142.853 kb on - strand, within MPMX26_03024 at 3142.880 kb on - strand, within MPMX26_03024 at 3142.880 kb on - strand, within MPMX26_03024 at 3142.880 kb on - strand, within MPMX26_03024 at 3142.890 kb on - strand, within MPMX26_03024 at 3142.901 kb on - strand, within MPMX26_03024 at 3142.957 kb on - strand, within MPMX26_03024 at 3142.974 kb on - strand, within MPMX26_03024 at 3142.978 kb on - strand, within MPMX26_03024 at 3142.978 kb on - strand, within MPMX26_03024 at 3142.997 kb on - strand, within MPMX26_03024 at 3142.997 kb on - strand, within MPMX26_03024 at 3143.002 kb on - strand, within MPMX26_03024 at 3143.121 kb on - strand, within MPMX26_03024 at 3143.174 kb on - strand, within MPMX26_03024 at 3143.246 kb on - strand, within MPMX26_03024 at 3143.246 kb on - strand, within MPMX26_03024 at 3143.266 kb on - strand, within MPMX26_03024 at 3143.297 kb on - strand, within MPMX26_03024 at 3143.297 kb on - strand, within MPMX26_03024 at 3143.309 kb on - strand, within MPMX26_03024 at 3143.339 kb on - strand, within MPMX26_03024 at 3143.339 kb on - strand, within MPMX26_03024 at 3143.344 kb on - strand, within MPMX26_03024 at 3143.375 kb on - strand, within MPMX26_03024 at 3143.462 kb on - strand, within MPMX26_03024 at 3143.521 kb on - strand, within MPMX26_03024 at 3143.521 kb on - strand, within MPMX26_03024 at 3143.521 kb on - strand, within MPMX26_03024 at 3143.529 kb on - strand, within MPMX26_03024 at 3143.529 kb on - strand, within MPMX26_03024 at 3143.529 kb on - strand, within MPMX26_03024 at 3143.529 kb on - strand, within MPMX26_03024 at 3143.529 kb on - strand, within MPMX26_03024 at 3143.529 kb on - strand, within MPMX26_03024 at 3143.529 kb on - strand, within MPMX26_03024 at 3143.534 kb on - strand, within MPMX26_03024 at 3143.534 kb on - strand, within MPMX26_03024 at 3143.539 kb on - strand, within MPMX26_03024 at 3143.539 kb on - strand, within MPMX26_03024 at 3143.539 kb on - strand, within MPMX26_03024 at 3143.561 kb on - strand, within MPMX26_03024 at 3143.565 kb on - strand, within MPMX26_03024 at 3143.566 kb on - strand, within MPMX26_03024 at 3143.568 kb on - strand, within MPMX26_03024 at 3143.568 kb on - strand, within MPMX26_03024 at 3143.581 kb on - strand, within MPMX26_03024 at 3143.594 kb on - strand, within MPMX26_03024 at 3143.615 kb on - strand, within MPMX26_03024 at 3143.615 kb on - strand, within MPMX26_03024 at 3143.615 kb on - strand, within MPMX26_03024 at 3143.615 kb on - strand, within MPMX26_03024 at 3143.615 kb on - strand, within MPMX26_03024 at 3143.615 kb on - strand, within MPMX26_03024 at 3143.615 kb on - strand, within MPMX26_03024 at 3143.615 kb on - strand, within MPMX26_03024 at 3143.615 kb on - strand, within MPMX26_03024 at 3143.651 kb on - strand, within MPMX26_03024 at 3143.671 kb on - strand, within MPMX26_03024 at 3143.681 kb on - strand, within MPMX26_03024 at 3143.681 kb on - strand, within MPMX26_03024 at 3143.681 kb on - strand, within MPMX26_03024 at 3143.699 kb on - strand at 3143.770 kb on - strand at 3143.770 kb on - strand at 3144.450 kb on + strand, within MPMX26_03025 at 3144.450 kb on + strand, within MPMX26_03025 at 3144.450 kb on + strand, within MPMX26_03025 at 3144.460 kb on + strand, within MPMX26_03025 at 3144.468 kb on + strand, within MPMX26_03025 at 3144.473 kb on + strand, within MPMX26_03025 at 3144.483 kb on + strand, within MPMX26_03025 at 3144.643 kb on + strand, within MPMX26_03025 at 3144.648 kb on + strand, within MPMX26_03025 at 3144.663 kb on + strand, within MPMX26_03025 at 3144.679 kb on + strand, within MPMX26_03025 at 3144.766 kb on + strand, within MPMX26_03025 at 3144.766 kb on + strand, within MPMX26_03025 at 3144.768 kb on + strand, within MPMX26_03025 at 3144.787 kb on + strand, within MPMX26_03025 at 3144.787 kb on + strand, within MPMX26_03025 at 3144.792 kb on + strand, within MPMX26_03025 at 3144.797 kb on + strand, within MPMX26_03025 at 3144.802 kb on + strand, within MPMX26_03025 at 3144.811 kb on + strand, within MPMX26_03025 at 3144.822 kb on + strand, within MPMX26_03025 at 3144.826 kb on + strand, within MPMX26_03025
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 3,141,754 + MPMX26_03022 0.54 -0.7 3,141,999 - MPMX26_03022 0.84 -1.3 3,142,047 - MPMX26_03022 0.90 +0.6 3,142,049 + +0.0 3,142,057 - -0.9 3,142,203 - -0.2 3,142,203 - +0.1 3,142,233 - MPMX26_03023 0.12 +0.1 3,142,320 - MPMX26_03023 0.79 -0.0 3,142,349 - -0.7 3,142,359 - +0.9 3,142,359 - -0.9 3,142,361 - -0.0 3,142,361 - -0.5 3,142,361 - +0.4 3,142,377 - -1.6 3,142,377 - -0.6 3,142,387 - +0.2 3,142,389 - +0.0 3,142,396 - +0.4 3,142,408 - -1.0 3,142,410 - -0.1 3,142,410 - +1.3 3,142,443 - -0.6 3,142,494 - -0.2 3,142,502 - -0.0 3,142,502 - -0.6 3,142,515 - MPMX26_03024 0.11 -0.1 3,142,515 - MPMX26_03024 0.11 -0.5 3,142,555 - MPMX26_03024 0.14 -0.5 3,142,560 - MPMX26_03024 0.14 -0.7 3,142,613 - MPMX26_03024 0.17 +0.3 3,142,613 - MPMX26_03024 0.17 -1.1 3,142,613 - MPMX26_03024 0.17 +0.3 3,142,642 - MPMX26_03024 0.19 -0.4 3,142,691 - MPMX26_03024 0.23 -0.9 3,142,728 - MPMX26_03024 0.25 -0.1 3,142,789 - MPMX26_03024 0.29 -0.4 3,142,798 - MPMX26_03024 0.30 +0.7 3,142,824 - MPMX26_03024 0.32 -0.3 3,142,836 - MPMX26_03024 0.33 -1.2 3,142,853 - MPMX26_03024 0.34 +0.1 3,142,880 - MPMX26_03024 0.35 -0.2 3,142,880 - MPMX26_03024 0.35 +0.4 3,142,880 - MPMX26_03024 0.35 -0.4 3,142,890 - MPMX26_03024 0.36 -1.1 3,142,901 - MPMX26_03024 0.37 -0.4 3,142,957 - MPMX26_03024 0.41 -0.7 3,142,974 - MPMX26_03024 0.42 +0.7 3,142,978 - MPMX26_03024 0.42 -1.0 3,142,978 - MPMX26_03024 0.42 -0.7 3,142,997 - MPMX26_03024 0.43 +0.1 3,142,997 - MPMX26_03024 0.43 -0.1 3,143,002 - MPMX26_03024 0.44 -0.2 3,143,121 - MPMX26_03024 0.52 +0.2 3,143,174 - MPMX26_03024 0.55 -0.1 3,143,246 - MPMX26_03024 0.60 -0.0 3,143,246 - MPMX26_03024 0.60 +0.2 3,143,266 - MPMX26_03024 0.62 -0.6 3,143,297 - MPMX26_03024 0.64 -0.9 3,143,297 - MPMX26_03024 0.64 -0.2 3,143,309 - MPMX26_03024 0.65 +0.3 3,143,339 - MPMX26_03024 0.67 +0.0 3,143,339 - MPMX26_03024 0.67 +0.5 3,143,344 - MPMX26_03024 0.67 +0.2 3,143,375 - MPMX26_03024 0.69 +0.1 3,143,462 - MPMX26_03024 0.75 -0.5 3,143,521 - MPMX26_03024 0.79 +0.6 3,143,521 - MPMX26_03024 0.79 +0.2 3,143,521 - MPMX26_03024 0.79 -0.5 3,143,529 - MPMX26_03024 0.79 -0.8 3,143,529 - MPMX26_03024 0.79 -0.2 3,143,529 - MPMX26_03024 0.79 +0.2 3,143,529 - MPMX26_03024 0.79 -0.4 3,143,529 - MPMX26_03024 0.79 +0.1 3,143,529 - MPMX26_03024 0.79 -0.4 3,143,529 - MPMX26_03024 0.79 -0.1 3,143,534 - MPMX26_03024 0.80 +0.8 3,143,534 - MPMX26_03024 0.80 -0.5 3,143,539 - MPMX26_03024 0.80 +0.2 3,143,539 - MPMX26_03024 0.80 +0.4 3,143,539 - MPMX26_03024 0.80 +0.3 3,143,561 - MPMX26_03024 0.82 -0.4 3,143,565 - MPMX26_03024 0.82 -0.4 3,143,566 - MPMX26_03024 0.82 -0.1 3,143,568 - MPMX26_03024 0.82 +0.4 3,143,568 - MPMX26_03024 0.82 -0.0 3,143,581 - MPMX26_03024 0.83 -0.0 3,143,594 - MPMX26_03024 0.84 +0.1 3,143,615 - MPMX26_03024 0.85 -0.3 3,143,615 - MPMX26_03024 0.85 +0.3 3,143,615 - MPMX26_03024 0.85 +0.0 3,143,615 - MPMX26_03024 0.85 +0.3 3,143,615 - MPMX26_03024 0.85 +0.1 3,143,615 - MPMX26_03024 0.85 -0.4 3,143,615 - MPMX26_03024 0.85 +0.7 3,143,615 - MPMX26_03024 0.85 -1.0 3,143,615 - MPMX26_03024 0.85 -0.8 3,143,651 - MPMX26_03024 0.88 -0.1 3,143,671 - MPMX26_03024 0.89 -0.9 3,143,681 - MPMX26_03024 0.90 -0.1 3,143,681 - MPMX26_03024 0.90 -0.3 3,143,681 - MPMX26_03024 0.90 -0.1 3,143,699 - -0.2 3,143,770 - -1.0 3,143,770 - -0.0 3,144,450 + MPMX26_03025 0.12 -0.1 3,144,450 + MPMX26_03025 0.12 -0.3 3,144,450 + MPMX26_03025 0.12 +0.9 3,144,460 + MPMX26_03025 0.13 +0.2 3,144,468 + MPMX26_03025 0.14 +0.4 3,144,473 + MPMX26_03025 0.15 +0.7 3,144,483 + MPMX26_03025 0.16 +0.0 3,144,643 + MPMX26_03025 0.39 +0.4 3,144,648 + MPMX26_03025 0.40 -0.1 3,144,663 + MPMX26_03025 0.42 -0.4 3,144,679 + MPMX26_03025 0.45 -0.6 3,144,766 + MPMX26_03025 0.57 +0.1 3,144,766 + MPMX26_03025 0.57 +0.1 3,144,768 + MPMX26_03025 0.57 +0.0 3,144,787 + MPMX26_03025 0.60 +0.1 3,144,787 + MPMX26_03025 0.60 +0.0 3,144,792 + MPMX26_03025 0.61 +0.7 3,144,797 + MPMX26_03025 0.62 +0.4 3,144,802 + MPMX26_03025 0.62 -0.1 3,144,811 + MPMX26_03025 0.64 -0.3 3,144,822 + MPMX26_03025 0.65 -0.5 3,144,826 + MPMX26_03025 0.66 -1.2
Or see this region's nucleotide sequence