Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02970 and MPMX26_02971 are separated by 11 nucleotides MPMX26_02971 and MPMX26_02972 are separated by 3 nucleotides MPMX26_02972 and MPMX26_02973 are separated by 12 nucleotides
MPMX26_02970: MPMX26_02970 - Riboflavin biosynthesis protein RibBA, at 3,086,244 to 3,087,365
_02970
MPMX26_02971: MPMX26_02971 - 6,7-dimethyl-8-ribityllumazine synthase, at 3,087,377 to 3,087,847
_02971
MPMX26_02972: MPMX26_02972 - Transcription antitermination protein NusB, at 3,087,851 to 3,088,300
_02972
MPMX26_02973: MPMX26_02973 - Thiamine-monophosphate kinase, at 3,088,313 to 3,089,230
_02973
Position (kb)
3087
3088 Strain fitness (log2 ratio)
-1
0
1 at 3086.417 kb on + strand, within MPMX26_02970 at 3086.434 kb on + strand, within MPMX26_02970 at 3086.468 kb on + strand, within MPMX26_02970 at 3086.468 kb on + strand, within MPMX26_02970 at 3086.478 kb on + strand, within MPMX26_02970 at 3086.478 kb on + strand, within MPMX26_02970 at 3086.478 kb on + strand, within MPMX26_02970 at 3086.478 kb on + strand, within MPMX26_02970 at 3086.478 kb on + strand, within MPMX26_02970 at 3086.483 kb on + strand, within MPMX26_02970 at 3086.488 kb on + strand, within MPMX26_02970 at 3086.494 kb on + strand, within MPMX26_02970 at 3086.504 kb on + strand, within MPMX26_02970 at 3086.504 kb on + strand, within MPMX26_02970 at 3086.522 kb on + strand, within MPMX26_02970 at 3086.522 kb on + strand, within MPMX26_02970 at 3086.522 kb on + strand, within MPMX26_02970 at 3086.522 kb on + strand, within MPMX26_02970 at 3086.522 kb on + strand, within MPMX26_02970 at 3086.522 kb on + strand, within MPMX26_02970 at 3086.522 kb on + strand, within MPMX26_02970 at 3086.522 kb on + strand, within MPMX26_02970 at 3086.525 kb on + strand, within MPMX26_02970 at 3086.550 kb on + strand, within MPMX26_02970 at 3086.559 kb on + strand, within MPMX26_02970 at 3086.564 kb on + strand, within MPMX26_02970 at 3086.574 kb on + strand, within MPMX26_02970 at 3086.588 kb on + strand, within MPMX26_02970 at 3086.588 kb on + strand, within MPMX26_02970 at 3086.597 kb on + strand, within MPMX26_02970 at 3086.642 kb on + strand, within MPMX26_02970 at 3086.642 kb on + strand, within MPMX26_02970 at 3086.652 kb on + strand, within MPMX26_02970 at 3086.652 kb on + strand, within MPMX26_02970 at 3086.652 kb on + strand, within MPMX26_02970 at 3086.652 kb on + strand, within MPMX26_02970 at 3086.652 kb on + strand, within MPMX26_02970 at 3086.652 kb on + strand, within MPMX26_02970 at 3086.662 kb on + strand, within MPMX26_02970 at 3086.662 kb on + strand, within MPMX26_02970 at 3086.672 kb on + strand, within MPMX26_02970 at 3086.672 kb on + strand, within MPMX26_02970 at 3086.682 kb on + strand, within MPMX26_02970 at 3086.693 kb on + strand, within MPMX26_02970 at 3086.693 kb on + strand, within MPMX26_02970 at 3086.752 kb on + strand, within MPMX26_02970 at 3086.752 kb on + strand, within MPMX26_02970 at 3086.752 kb on + strand, within MPMX26_02970 at 3086.752 kb on + strand, within MPMX26_02970 at 3086.767 kb on + strand, within MPMX26_02970 at 3086.818 kb on + strand, within MPMX26_02970 at 3086.838 kb on + strand, within MPMX26_02970 at 3086.845 kb on + strand, within MPMX26_02970 at 3086.845 kb on + strand, within MPMX26_02970 at 3086.845 kb on + strand, within MPMX26_02970 at 3086.845 kb on + strand, within MPMX26_02970 at 3086.845 kb on + strand, within MPMX26_02970 at 3086.850 kb on + strand, within MPMX26_02970 at 3086.866 kb on + strand, within MPMX26_02970 at 3086.871 kb on + strand, within MPMX26_02970 at 3086.887 kb on + strand, within MPMX26_02970 at 3086.894 kb on + strand, within MPMX26_02970 at 3086.894 kb on + strand, within MPMX26_02970 at 3086.902 kb on + strand, within MPMX26_02970 at 3086.957 kb on + strand, within MPMX26_02970 at 3086.957 kb on + strand, within MPMX26_02970 at 3086.957 kb on + strand, within MPMX26_02970 at 3086.957 kb on + strand, within MPMX26_02970 at 3086.957 kb on + strand, within MPMX26_02970 at 3086.957 kb on + strand, within MPMX26_02970 at 3086.957 kb on + strand, within MPMX26_02970 at 3086.969 kb on + strand, within MPMX26_02970 at 3086.981 kb on + strand, within MPMX26_02970 at 3086.999 kb on + strand, within MPMX26_02970 at 3087.103 kb on + strand, within MPMX26_02970 at 3087.106 kb on + strand, within MPMX26_02970 at 3087.106 kb on + strand, within MPMX26_02970 at 3087.108 kb on + strand, within MPMX26_02970 at 3087.108 kb on + strand, within MPMX26_02970 at 3087.108 kb on + strand, within MPMX26_02970 at 3087.108 kb on + strand, within MPMX26_02970 at 3087.108 kb on + strand, within MPMX26_02970 at 3087.108 kb on + strand, within MPMX26_02970 at 3087.108 kb on + strand, within MPMX26_02970 at 3087.113 kb on + strand, within MPMX26_02970 at 3087.113 kb on + strand, within MPMX26_02970 at 3087.113 kb on + strand, within MPMX26_02970 at 3087.113 kb on + strand, within MPMX26_02970 at 3087.113 kb on + strand, within MPMX26_02970 at 3087.113 kb on + strand, within MPMX26_02970 at 3087.113 kb on + strand, within MPMX26_02970 at 3087.113 kb on + strand, within MPMX26_02970 at 3087.118 kb on + strand, within MPMX26_02970 at 3087.118 kb on + strand, within MPMX26_02970 at 3087.118 kb on + strand, within MPMX26_02970 at 3087.118 kb on + strand, within MPMX26_02970 at 3087.118 kb on + strand, within MPMX26_02970 at 3087.141 kb on + strand, within MPMX26_02970 at 3087.141 kb on + strand, within MPMX26_02970 at 3087.143 kb on + strand, within MPMX26_02970 at 3087.151 kb on - strand, within MPMX26_02970 at 3087.162 kb on + strand, within MPMX26_02970 at 3087.163 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.172 kb on + strand, within MPMX26_02970 at 3087.212 kb on + strand, within MPMX26_02970 at 3087.212 kb on + strand, within MPMX26_02970 at 3087.212 kb on + strand, within MPMX26_02970 at 3087.220 kb on + strand, within MPMX26_02970 at 3087.220 kb on + strand, within MPMX26_02970 at 3087.250 kb on + strand, within MPMX26_02970 at 3087.285 kb on + strand at 3087.295 kb on + strand at 3087.295 kb on + strand at 3087.305 kb on + strand at 3087.329 kb on + strand at 3088.295 kb on + strand at 3088.303 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 3,086,417 + MPMX26_02970 0.15 +0.4 3,086,434 + MPMX26_02970 0.17 -0.4 3,086,468 + MPMX26_02970 0.20 -0.4 3,086,468 + MPMX26_02970 0.20 -0.4 3,086,478 + MPMX26_02970 0.21 +0.5 3,086,478 + MPMX26_02970 0.21 +0.4 3,086,478 + MPMX26_02970 0.21 -0.3 3,086,478 + MPMX26_02970 0.21 +0.3 3,086,478 + MPMX26_02970 0.21 +0.3 3,086,483 + MPMX26_02970 0.21 +0.7 3,086,488 + MPMX26_02970 0.22 +0.1 3,086,494 + MPMX26_02970 0.22 +0.9 3,086,504 + MPMX26_02970 0.23 +0.3 3,086,504 + MPMX26_02970 0.23 +0.2 3,086,522 + MPMX26_02970 0.25 +0.0 3,086,522 + MPMX26_02970 0.25 -0.3 3,086,522 + MPMX26_02970 0.25 +0.2 3,086,522 + MPMX26_02970 0.25 +0.3 3,086,522 + MPMX26_02970 0.25 +0.5 3,086,522 + MPMX26_02970 0.25 -0.0 3,086,522 + MPMX26_02970 0.25 -0.0 3,086,522 + MPMX26_02970 0.25 +0.2 3,086,525 + MPMX26_02970 0.25 -0.4 3,086,550 + MPMX26_02970 0.27 +0.1 3,086,559 + MPMX26_02970 0.28 -0.1 3,086,564 + MPMX26_02970 0.29 -0.1 3,086,574 + MPMX26_02970 0.29 -0.2 3,086,588 + MPMX26_02970 0.31 +0.2 3,086,588 + MPMX26_02970 0.31 +0.5 3,086,597 + MPMX26_02970 0.31 +1.0 3,086,642 + MPMX26_02970 0.35 +0.5 3,086,642 + MPMX26_02970 0.35 -0.9 3,086,652 + MPMX26_02970 0.36 +0.1 3,086,652 + MPMX26_02970 0.36 -0.4 3,086,652 + MPMX26_02970 0.36 -0.6 3,086,652 + MPMX26_02970 0.36 +0.2 3,086,652 + MPMX26_02970 0.36 -0.9 3,086,652 + MPMX26_02970 0.36 +0.2 3,086,662 + MPMX26_02970 0.37 -0.4 3,086,662 + MPMX26_02970 0.37 -0.2 3,086,672 + MPMX26_02970 0.38 +0.5 3,086,672 + MPMX26_02970 0.38 +0.4 3,086,682 + MPMX26_02970 0.39 +0.1 3,086,693 + MPMX26_02970 0.40 +0.1 3,086,693 + MPMX26_02970 0.40 +0.1 3,086,752 + MPMX26_02970 0.45 +0.2 3,086,752 + MPMX26_02970 0.45 -0.1 3,086,752 + MPMX26_02970 0.45 -0.0 3,086,752 + MPMX26_02970 0.45 +0.3 3,086,767 + MPMX26_02970 0.47 -0.1 3,086,818 + MPMX26_02970 0.51 +0.0 3,086,838 + MPMX26_02970 0.53 +0.1 3,086,845 + MPMX26_02970 0.54 +0.7 3,086,845 + MPMX26_02970 0.54 +0.1 3,086,845 + MPMX26_02970 0.54 +0.2 3,086,845 + MPMX26_02970 0.54 -0.0 3,086,845 + MPMX26_02970 0.54 +0.0 3,086,850 + MPMX26_02970 0.54 +0.5 3,086,866 + MPMX26_02970 0.55 +0.7 3,086,871 + MPMX26_02970 0.56 +0.5 3,086,887 + MPMX26_02970 0.57 +0.3 3,086,894 + MPMX26_02970 0.58 -0.0 3,086,894 + MPMX26_02970 0.58 +0.8 3,086,902 + MPMX26_02970 0.59 +0.7 3,086,957 + MPMX26_02970 0.64 +0.2 3,086,957 + MPMX26_02970 0.64 +0.2 3,086,957 + MPMX26_02970 0.64 -0.2 3,086,957 + MPMX26_02970 0.64 +0.4 3,086,957 + MPMX26_02970 0.64 +0.6 3,086,957 + MPMX26_02970 0.64 +0.1 3,086,957 + MPMX26_02970 0.64 +0.0 3,086,969 + MPMX26_02970 0.65 -0.6 3,086,981 + MPMX26_02970 0.66 -0.3 3,086,999 + MPMX26_02970 0.67 -0.1 3,087,103 + MPMX26_02970 0.77 -0.1 3,087,106 + MPMX26_02970 0.77 +0.5 3,087,106 + MPMX26_02970 0.77 +0.2 3,087,108 + MPMX26_02970 0.77 -0.4 3,087,108 + MPMX26_02970 0.77 +0.0 3,087,108 + MPMX26_02970 0.77 -0.4 3,087,108 + MPMX26_02970 0.77 +0.3 3,087,108 + MPMX26_02970 0.77 +0.2 3,087,108 + MPMX26_02970 0.77 +0.1 3,087,108 + MPMX26_02970 0.77 +0.0 3,087,113 + MPMX26_02970 0.77 -0.1 3,087,113 + MPMX26_02970 0.77 +0.1 3,087,113 + MPMX26_02970 0.77 +0.2 3,087,113 + MPMX26_02970 0.77 +0.4 3,087,113 + MPMX26_02970 0.77 +0.6 3,087,113 + MPMX26_02970 0.77 -0.1 3,087,113 + MPMX26_02970 0.77 +0.5 3,087,113 + MPMX26_02970 0.77 +0.3 3,087,118 + MPMX26_02970 0.78 -0.2 3,087,118 + MPMX26_02970 0.78 +0.6 3,087,118 + MPMX26_02970 0.78 +0.6 3,087,118 + MPMX26_02970 0.78 +0.5 3,087,118 + MPMX26_02970 0.78 -0.2 3,087,141 + MPMX26_02970 0.80 +0.4 3,087,141 + MPMX26_02970 0.80 -0.1 3,087,143 + MPMX26_02970 0.80 +0.4 3,087,151 - MPMX26_02970 0.81 +0.4 3,087,162 + MPMX26_02970 0.82 +0.1 3,087,163 + MPMX26_02970 0.82 +0.3 3,087,172 + MPMX26_02970 0.83 +0.2 3,087,172 + MPMX26_02970 0.83 +0.3 3,087,172 + MPMX26_02970 0.83 -0.2 3,087,172 + MPMX26_02970 0.83 -0.2 3,087,172 + MPMX26_02970 0.83 +0.6 3,087,172 + MPMX26_02970 0.83 +0.1 3,087,172 + MPMX26_02970 0.83 +0.1 3,087,172 + MPMX26_02970 0.83 +0.7 3,087,172 + MPMX26_02970 0.83 +0.5 3,087,172 + MPMX26_02970 0.83 +0.9 3,087,172 + MPMX26_02970 0.83 -0.0 3,087,172 + MPMX26_02970 0.83 +0.0 3,087,172 + MPMX26_02970 0.83 +0.5 3,087,172 + MPMX26_02970 0.83 +0.5 3,087,212 + MPMX26_02970 0.86 +0.3 3,087,212 + MPMX26_02970 0.86 +0.4 3,087,212 + MPMX26_02970 0.86 -0.1 3,087,220 + MPMX26_02970 0.87 +0.2 3,087,220 + MPMX26_02970 0.87 +0.5 3,087,250 + MPMX26_02970 0.90 +0.8 3,087,285 + -0.0 3,087,295 + -0.0 3,087,295 + +0.2 3,087,305 + +0.1 3,087,329 + +0.2 3,088,295 + -0.9 3,088,303 + -1.3
Or see this region's nucleotide sequence