Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02823

Experiment: casaminos (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02822 and MPMX26_02823 are separated by 10 nucleotidesMPMX26_02823 and MPMX26_02824 are separated by 11 nucleotides MPMX26_02822: MPMX26_02822 - Peptidoglycan D,D-transpeptidase FtsI, at 2,910,996 to 2,912,819 _02822 MPMX26_02823: MPMX26_02823 - Cell division protein FtsL, at 2,912,830 to 2,913,177 _02823 MPMX26_02824: MPMX26_02824 - Ribosomal RNA small subunit methyltransferase H, at 2,913,189 to 2,914,100 _02824 Position (kb) 2912 2913 2914Strain fitness (log2 ratio) -1 0 1at 2913.194 kb on - strandat 2913.194 kb on - strandat 2913.199 kb on - strandat 2913.216 kb on - strandat 2913.216 kb on - strandat 2913.217 kb on - strandat 2913.231 kb on - strandat 2913.305 kb on - strand, within MPMX26_02824at 2913.332 kb on - strand, within MPMX26_02824at 2913.386 kb on - strand, within MPMX26_02824at 2913.402 kb on - strand, within MPMX26_02824at 2913.419 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.473 kb on - strand, within MPMX26_02824at 2913.752 kb on - strand, within MPMX26_02824at 2913.861 kb on - strand, within MPMX26_02824at 2913.960 kb on - strand, within MPMX26_02824at 2914.017 kb on - strandat 2914.047 kb on - strandat 2914.085 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
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2,913,194 - +0.9
2,913,194 - -0.8
2,913,199 - -0.3
2,913,216 - +0.6
2,913,216 - +0.9
2,913,217 - +1.2
2,913,231 - +0.6
2,913,305 - MPMX26_02824 0.13 +0.5
2,913,332 - MPMX26_02824 0.16 +0.4
2,913,386 - MPMX26_02824 0.22 +0.5
2,913,402 - MPMX26_02824 0.23 +1.0
2,913,419 - MPMX26_02824 0.25 +0.6
2,913,453 - MPMX26_02824 0.29 +0.2
2,913,453 - MPMX26_02824 0.29 +1.0
2,913,453 - MPMX26_02824 0.29 +0.6
2,913,453 - MPMX26_02824 0.29 +1.7
2,913,453 - MPMX26_02824 0.29 +0.5
2,913,453 - MPMX26_02824 0.29 +0.4
2,913,473 - MPMX26_02824 0.31 +0.2
2,913,752 - MPMX26_02824 0.62 +1.1
2,913,861 - MPMX26_02824 0.74 +0.6
2,913,960 - MPMX26_02824 0.85 +1.5
2,914,017 - -0.7
2,914,047 - +0.3
2,914,085 - +1.2

Or see this region's nucleotide sequence