Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02822 and MPMX26_02823 are separated by 10 nucleotides MPMX26_02823 and MPMX26_02824 are separated by 11 nucleotides
MPMX26_02822: MPMX26_02822 - Peptidoglycan D,D-transpeptidase FtsI, at 2,910,996 to 2,912,819
_02822
MPMX26_02823: MPMX26_02823 - Cell division protein FtsL, at 2,912,830 to 2,913,177
_02823
MPMX26_02824: MPMX26_02824 - Ribosomal RNA small subunit methyltransferase H, at 2,913,189 to 2,914,100
_02824
Position (kb)
2912
2913
2914 Strain fitness (log2 ratio)
-1
0
1 at 2913.194 kb on - strand at 2913.194 kb on - strand at 2913.199 kb on - strand at 2913.216 kb on - strand at 2913.216 kb on - strand at 2913.217 kb on - strand at 2913.231 kb on - strand at 2913.305 kb on - strand, within MPMX26_02824 at 2913.332 kb on - strand, within MPMX26_02824 at 2913.386 kb on - strand, within MPMX26_02824 at 2913.402 kb on - strand, within MPMX26_02824 at 2913.419 kb on - strand, within MPMX26_02824 at 2913.453 kb on - strand, within MPMX26_02824 at 2913.453 kb on - strand, within MPMX26_02824 at 2913.453 kb on - strand, within MPMX26_02824 at 2913.453 kb on - strand, within MPMX26_02824 at 2913.453 kb on - strand, within MPMX26_02824 at 2913.453 kb on - strand, within MPMX26_02824 at 2913.473 kb on - strand, within MPMX26_02824 at 2913.752 kb on - strand, within MPMX26_02824 at 2913.861 kb on - strand, within MPMX26_02824 at 2913.960 kb on - strand, within MPMX26_02824 at 2914.017 kb on - strand at 2914.047 kb on - strand at 2914.085 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 2,913,194 - +0.9 2,913,194 - -0.8 2,913,199 - -0.3 2,913,216 - +0.6 2,913,216 - +0.9 2,913,217 - +1.2 2,913,231 - +0.6 2,913,305 - MPMX26_02824 0.13 +0.5 2,913,332 - MPMX26_02824 0.16 +0.4 2,913,386 - MPMX26_02824 0.22 +0.5 2,913,402 - MPMX26_02824 0.23 +1.0 2,913,419 - MPMX26_02824 0.25 +0.6 2,913,453 - MPMX26_02824 0.29 +0.2 2,913,453 - MPMX26_02824 0.29 +1.0 2,913,453 - MPMX26_02824 0.29 +0.6 2,913,453 - MPMX26_02824 0.29 +1.7 2,913,453 - MPMX26_02824 0.29 +0.5 2,913,453 - MPMX26_02824 0.29 +0.4 2,913,473 - MPMX26_02824 0.31 +0.2 2,913,752 - MPMX26_02824 0.62 +1.1 2,913,861 - MPMX26_02824 0.74 +0.6 2,913,960 - MPMX26_02824 0.85 +1.5 2,914,017 - -0.7 2,914,047 - +0.3 2,914,085 - +1.2
Or see this region's nucleotide sequence