Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01753

Experiment: casaminos (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01752 and MPMX26_01753 are separated by 92 nucleotidesMPMX26_01753 and MPMX26_01754 are separated by 78 nucleotidesMPMX26_01754 and MPMX26_01755 are separated by 128 nucleotides MPMX26_01752: MPMX26_01752 - hypothetical protein, at 1,809,794 to 1,810,681 _01752 MPMX26_01753: MPMX26_01753 - Transaldolase, at 1,810,774 to 1,811,763 _01753 MPMX26_01754: MPMX26_01754 - Leucine efflux protein, at 1,811,842 to 1,812,495 _01754 MPMX26_01755: MPMX26_01755 - Inner membrane protein YdcO, at 1,812,624 to 1,813,808 _01755 Position (kb) 1810 1811 1812Strain fitness (log2 ratio) -1 0 1 2at 1809.962 kb on + strand, within MPMX26_01752at 1810.073 kb on + strand, within MPMX26_01752at 1810.097 kb on + strand, within MPMX26_01752at 1810.139 kb on + strand, within MPMX26_01752at 1810.310 kb on + strand, within MPMX26_01752at 1810.624 kb on + strandat 1810.786 kb on + strandat 1810.786 kb on + strandat 1810.825 kb on + strandat 1810.854 kb on + strandat 1810.875 kb on + strand, within MPMX26_01753at 1810.885 kb on + strand, within MPMX26_01753at 1811.011 kb on + strand, within MPMX26_01753at 1811.101 kb on + strand, within MPMX26_01753at 1811.109 kb on + strand, within MPMX26_01753at 1811.111 kb on + strand, within MPMX26_01753at 1811.151 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.166 kb on + strand, within MPMX26_01753at 1811.191 kb on + strand, within MPMX26_01753at 1811.191 kb on + strand, within MPMX26_01753at 1811.191 kb on + strand, within MPMX26_01753at 1811.191 kb on + strand, within MPMX26_01753at 1811.224 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.236 kb on + strand, within MPMX26_01753at 1811.259 kb on + strand, within MPMX26_01753at 1811.266 kb on + strand, within MPMX26_01753at 1811.283 kb on + strand, within MPMX26_01753at 1811.358 kb on + strand, within MPMX26_01753at 1811.380 kb on + strand, within MPMX26_01753at 1811.419 kb on + strand, within MPMX26_01753at 1811.419 kb on + strand, within MPMX26_01753at 1811.419 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.425 kb on + strand, within MPMX26_01753at 1811.437 kb on + strand, within MPMX26_01753at 1811.473 kb on + strand, within MPMX26_01753at 1811.473 kb on + strand, within MPMX26_01753at 1811.473 kb on + strand, within MPMX26_01753at 1811.473 kb on + strand, within MPMX26_01753at 1811.480 kb on + strand, within MPMX26_01753at 1811.481 kb on - strand, within MPMX26_01753at 1811.499 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.560 kb on + strand, within MPMX26_01753at 1811.590 kb on + strand, within MPMX26_01753at 1811.608 kb on + strand, within MPMX26_01753at 1811.608 kb on + strand, within MPMX26_01753at 1811.608 kb on + strand, within MPMX26_01753at 1811.617 kb on + strand, within MPMX26_01753at 1811.617 kb on + strand, within MPMX26_01753at 1811.617 kb on + strand, within MPMX26_01753at 1811.649 kb on + strand, within MPMX26_01753at 1812.719 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
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1,809,962 + MPMX26_01752 0.19 +0.2
1,810,073 + MPMX26_01752 0.31 +0.5
1,810,097 + MPMX26_01752 0.34 +0.0
1,810,139 + MPMX26_01752 0.39 -0.7
1,810,310 + MPMX26_01752 0.58 +0.4
1,810,624 + +0.5
1,810,786 + +1.0
1,810,786 + +0.4
1,810,825 + +0.9
1,810,854 + +0.6
1,810,875 + MPMX26_01753 0.10 +0.5
1,810,885 + MPMX26_01753 0.11 +0.7
1,811,011 + MPMX26_01753 0.24 +0.8
1,811,101 + MPMX26_01753 0.33 +0.6
1,811,109 + MPMX26_01753 0.34 +0.4
1,811,111 + MPMX26_01753 0.34 -0.2
1,811,151 + MPMX26_01753 0.38 +0.7
1,811,166 + MPMX26_01753 0.40 +0.4
1,811,166 + MPMX26_01753 0.40 +0.6
1,811,166 + MPMX26_01753 0.40 +0.7
1,811,166 + MPMX26_01753 0.40 +1.1
1,811,166 + MPMX26_01753 0.40 +1.2
1,811,166 + MPMX26_01753 0.40 +1.1
1,811,191 + MPMX26_01753 0.42 +1.9
1,811,191 + MPMX26_01753 0.42 +0.4
1,811,191 + MPMX26_01753 0.42 +0.8
1,811,191 + MPMX26_01753 0.42 +0.5
1,811,224 + MPMX26_01753 0.45 +0.5
1,811,236 + MPMX26_01753 0.47 +0.0
1,811,236 + MPMX26_01753 0.47 +1.3
1,811,236 + MPMX26_01753 0.47 +0.9
1,811,236 + MPMX26_01753 0.47 +0.3
1,811,236 + MPMX26_01753 0.47 +0.6
1,811,236 + MPMX26_01753 0.47 -0.6
1,811,236 + MPMX26_01753 0.47 +0.4
1,811,236 + MPMX26_01753 0.47 +0.4
1,811,236 + MPMX26_01753 0.47 +0.6
1,811,236 + MPMX26_01753 0.47 +0.4
1,811,236 + MPMX26_01753 0.47 +0.3
1,811,259 + MPMX26_01753 0.49 +0.5
1,811,266 + MPMX26_01753 0.50 +0.4
1,811,283 + MPMX26_01753 0.51 +0.4
1,811,358 + MPMX26_01753 0.59 +0.1
1,811,380 + MPMX26_01753 0.61 +0.6
1,811,419 + MPMX26_01753 0.65 +0.2
1,811,419 + MPMX26_01753 0.65 +0.7
1,811,419 + MPMX26_01753 0.65 +0.2
1,811,425 + MPMX26_01753 0.66 +0.5
1,811,425 + MPMX26_01753 0.66 +0.3
1,811,425 + MPMX26_01753 0.66 +0.5
1,811,425 + MPMX26_01753 0.66 +0.7
1,811,425 + MPMX26_01753 0.66 +0.6
1,811,437 + MPMX26_01753 0.67 +0.7
1,811,473 + MPMX26_01753 0.71 +0.4
1,811,473 + MPMX26_01753 0.71 +0.5
1,811,473 + MPMX26_01753 0.71 +0.4
1,811,473 + MPMX26_01753 0.71 +0.5
1,811,480 + MPMX26_01753 0.71 -1.2
1,811,481 - MPMX26_01753 0.71 +1.7
1,811,499 + MPMX26_01753 0.73 +0.8
1,811,560 + MPMX26_01753 0.79 +0.4
1,811,560 + MPMX26_01753 0.79 +0.5
1,811,560 + MPMX26_01753 0.79 +0.8
1,811,560 + MPMX26_01753 0.79 +0.3
1,811,560 + MPMX26_01753 0.79 +0.5
1,811,560 + MPMX26_01753 0.79 +0.5
1,811,590 + MPMX26_01753 0.82 +0.0
1,811,608 + MPMX26_01753 0.84 +0.8
1,811,608 + MPMX26_01753 0.84 +0.8
1,811,608 + MPMX26_01753 0.84 +0.4
1,811,617 + MPMX26_01753 0.85 +0.4
1,811,617 + MPMX26_01753 0.85 +0.8
1,811,617 + MPMX26_01753 0.85 +0.2
1,811,649 + MPMX26_01753 0.88 +0.5
1,812,719 - +0.0

Or see this region's nucleotide sequence