Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00810 and MPMX26_00811 are separated by 204 nucleotides MPMX26_00811 and MPMX26_00812 are separated by 102 nucleotides MPMX26_00812 and MPMX26_00813 are separated by 359 nucleotides MPMX26_00813 and MPMX26_00814 are separated by 96 nucleotides
MPMX26_00810: MPMX26_00810 - tRNA-cytidine(32) 2-sulfurtransferase, at 858,121 to 859,023
_00810
MPMX26_00811: MPMX26_00811 - hypothetical protein, at 859,228 to 859,614
_00811
MPMX26_00812: MPMX26_00812 - Membrane-bound lytic murein transglycosylase F, at 859,717 to 860,826
_00812
MPMX26_00813: MPMX26_00813 - Transcription elongation factor GreB, at 861,186 to 861,665
_00813
MPMX26_00814: MPMX26_00814 - tRNA-Ser, at 861,762 to 861,851
_00814
Position (kb) 859
860
861 Strain fitness (log2 ratio) -1
0
1 at 858.770 kb on + strand, within MPMX26_00810 at 858.780 kb on + strand, within MPMX26_00810 at 858.837 kb on + strand, within MPMX26_00810 at 858.837 kb on + strand, within MPMX26_00810 at 858.837 kb on + strand, within MPMX26_00810 at 858.837 kb on + strand, within MPMX26_00810 at 858.838 kb on + strand, within MPMX26_00810 at 858.856 kb on + strand, within MPMX26_00810 at 858.856 kb on + strand, within MPMX26_00810 at 858.856 kb on + strand, within MPMX26_00810 at 858.887 kb on + strand, within MPMX26_00810 at 858.911 kb on + strand, within MPMX26_00810 at 858.911 kb on + strand, within MPMX26_00810 at 858.952 kb on + strand at 858.952 kb on + strand at 858.953 kb on + strand at 859.049 kb on + strand at 859.179 kb on + strand at 859.187 kb on + strand at 859.246 kb on + strand at 859.291 kb on + strand, within MPMX26_00811 at 859.291 kb on + strand, within MPMX26_00811 at 859.309 kb on + strand, within MPMX26_00811 at 859.309 kb on + strand, within MPMX26_00811 at 859.309 kb on + strand, within MPMX26_00811 at 859.309 kb on + strand, within MPMX26_00811 at 859.353 kb on + strand, within MPMX26_00811 at 859.353 kb on + strand, within MPMX26_00811 at 859.353 kb on + strand, within MPMX26_00811 at 859.413 kb on + strand, within MPMX26_00811 at 859.428 kb on + strand, within MPMX26_00811 at 859.438 kb on + strand, within MPMX26_00811 at 859.439 kb on + strand, within MPMX26_00811 at 859.439 kb on + strand, within MPMX26_00811 at 859.439 kb on + strand, within MPMX26_00811 at 859.449 kb on + strand, within MPMX26_00811 at 859.510 kb on + strand, within MPMX26_00811 at 859.543 kb on + strand, within MPMX26_00811 at 859.543 kb on + strand, within MPMX26_00811 at 859.543 kb on + strand, within MPMX26_00811 at 859.543 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.553 kb on + strand, within MPMX26_00811 at 859.565 kb on + strand, within MPMX26_00811 at 861.555 kb on + strand, within MPMX26_00813 at 861.555 kb on + strand, within MPMX26_00813
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 858,770 + MPMX26_00810 0.72 -0.5 858,780 + MPMX26_00810 0.73 -0.2 858,837 + MPMX26_00810 0.79 -0.4 858,837 + MPMX26_00810 0.79 -0.5 858,837 + MPMX26_00810 0.79 +0.6 858,837 + MPMX26_00810 0.79 +0.1 858,838 + MPMX26_00810 0.79 -0.3 858,856 + MPMX26_00810 0.81 -0.5 858,856 + MPMX26_00810 0.81 -0.3 858,856 + MPMX26_00810 0.81 +0.2 858,887 + MPMX26_00810 0.85 -0.3 858,911 + MPMX26_00810 0.87 +0.1 858,911 + MPMX26_00810 0.87 -0.3 858,952 + -0.3 858,952 + +0.3 858,953 + -0.2 859,049 + +0.4 859,179 + -0.5 859,187 + -1.0 859,246 + -0.6 859,291 + MPMX26_00811 0.16 -0.1 859,291 + MPMX26_00811 0.16 -0.4 859,309 + MPMX26_00811 0.21 -0.3 859,309 + MPMX26_00811 0.21 -0.1 859,309 + MPMX26_00811 0.21 -0.0 859,309 + MPMX26_00811 0.21 -0.2 859,353 + MPMX26_00811 0.32 -0.3 859,353 + MPMX26_00811 0.32 -0.2 859,353 + MPMX26_00811 0.32 +0.2 859,413 + MPMX26_00811 0.48 -1.2 859,428 + MPMX26_00811 0.52 -0.2 859,438 + MPMX26_00811 0.54 -0.2 859,439 + MPMX26_00811 0.55 -0.6 859,439 + MPMX26_00811 0.55 -0.4 859,439 + MPMX26_00811 0.55 -0.1 859,449 + MPMX26_00811 0.57 -0.6 859,510 + MPMX26_00811 0.73 -0.4 859,543 + MPMX26_00811 0.81 +0.1 859,543 + MPMX26_00811 0.81 -0.4 859,543 + MPMX26_00811 0.81 -0.4 859,543 + MPMX26_00811 0.81 +0.1 859,553 + MPMX26_00811 0.84 +0.0 859,553 + MPMX26_00811 0.84 +0.3 859,553 + MPMX26_00811 0.84 +0.4 859,553 + MPMX26_00811 0.84 -0.0 859,553 + MPMX26_00811 0.84 +0.1 859,553 + MPMX26_00811 0.84 -0.3 859,553 + MPMX26_00811 0.84 -0.7 859,553 + MPMX26_00811 0.84 -0.4 859,553 + MPMX26_00811 0.84 -0.1 859,553 + MPMX26_00811 0.84 -0.1 859,565 + MPMX26_00811 0.87 -0.1 861,555 + MPMX26_00813 0.77 -0.2 861,555 + MPMX26_00813 0.77 +1.1
Or see this region's nucleotide sequence