Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00766 and MPMX26_00767 are separated by 15 nucleotides MPMX26_00767 and MPMX26_00768 are separated by 330 nucleotides MPMX26_00768 and MPMX26_00769 are separated by 60 nucleotides
MPMX26_00766: MPMX26_00766 - Carbamoyl-phosphate synthase large chain, at 809,691 to 812,921
_00766
MPMX26_00767: MPMX26_00767 - Carbamoyl-phosphate synthase small chain, at 812,937 to 814,076
_00767
MPMX26_00768: MPMX26_00768 - hypothetical protein, at 814,407 to 814,799
_00768
MPMX26_00769: MPMX26_00769 - hypothetical protein, at 814,860 to 815,396
_00769
Position (kb) 812
813
814
815 Strain fitness (log2 ratio) -2
-1
0
1 at 812.538 kb on - strand, within MPMX26_00766 at 813.007 kb on - strand at 813.081 kb on - strand, within MPMX26_00767 at 813.169 kb on - strand, within MPMX26_00767 at 813.229 kb on - strand, within MPMX26_00767 at 813.271 kb on - strand, within MPMX26_00767 at 813.424 kb on - strand, within MPMX26_00767 at 813.529 kb on - strand, within MPMX26_00767 at 813.531 kb on - strand, within MPMX26_00767 at 813.605 kb on - strand, within MPMX26_00767 at 813.605 kb on - strand, within MPMX26_00767 at 813.605 kb on - strand, within MPMX26_00767 at 814.023 kb on - strand at 814.165 kb on - strand at 814.175 kb on - strand at 814.772 kb on - strand at 814.876 kb on - strand at 814.917 kb on - strand, within MPMX26_00769 at 814.917 kb on - strand, within MPMX26_00769 at 814.917 kb on - strand, within MPMX26_00769 at 814.917 kb on - strand, within MPMX26_00769 at 814.922 kb on - strand, within MPMX26_00769 at 814.948 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.956 kb on - strand, within MPMX26_00769 at 814.958 kb on - strand, within MPMX26_00769 at 814.958 kb on - strand, within MPMX26_00769 at 814.982 kb on - strand, within MPMX26_00769 at 814.982 kb on - strand, within MPMX26_00769 at 814.982 kb on - strand, within MPMX26_00769 at 814.997 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.013 kb on - strand, within MPMX26_00769 at 815.014 kb on - strand, within MPMX26_00769 at 815.029 kb on - strand, within MPMX26_00769 at 815.058 kb on - strand, within MPMX26_00769 at 815.061 kb on - strand, within MPMX26_00769 at 815.072 kb on - strand, within MPMX26_00769
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 812,538 - MPMX26_00766 0.88 -0.2 813,007 - -0.5 813,081 - MPMX26_00767 0.13 -0.5 813,169 - MPMX26_00767 0.20 -0.2 813,229 - MPMX26_00767 0.26 -0.5 813,271 - MPMX26_00767 0.29 -1.8 813,424 - MPMX26_00767 0.43 -1.2 813,529 - MPMX26_00767 0.52 -0.5 813,531 - MPMX26_00767 0.52 -1.2 813,605 - MPMX26_00767 0.59 -0.2 813,605 - MPMX26_00767 0.59 +0.2 813,605 - MPMX26_00767 0.59 -1.0 814,023 - -0.5 814,165 - -2.5 814,175 - -2.1 814,772 - +1.1 814,876 - -0.3 814,917 - MPMX26_00769 0.11 -0.6 814,917 - MPMX26_00769 0.11 -0.2 814,917 - MPMX26_00769 0.11 -0.4 814,917 - MPMX26_00769 0.11 +0.1 814,922 - MPMX26_00769 0.12 -0.2 814,948 - MPMX26_00769 0.16 -0.5 814,956 - MPMX26_00769 0.18 -0.2 814,956 - MPMX26_00769 0.18 -0.5 814,956 - MPMX26_00769 0.18 -0.4 814,956 - MPMX26_00769 0.18 +0.8 814,956 - MPMX26_00769 0.18 +0.4 814,956 - MPMX26_00769 0.18 -0.3 814,956 - MPMX26_00769 0.18 -0.5 814,956 - MPMX26_00769 0.18 -0.5 814,956 - MPMX26_00769 0.18 -0.2 814,956 - MPMX26_00769 0.18 -0.6 814,958 - MPMX26_00769 0.18 -0.2 814,958 - MPMX26_00769 0.18 -0.6 814,982 - MPMX26_00769 0.23 -0.5 814,982 - MPMX26_00769 0.23 -0.5 814,982 - MPMX26_00769 0.23 -0.1 814,997 - MPMX26_00769 0.26 +0.1 815,013 - MPMX26_00769 0.28 +0.1 815,013 - MPMX26_00769 0.28 -0.5 815,013 - MPMX26_00769 0.28 -1.3 815,013 - MPMX26_00769 0.28 +0.1 815,013 - MPMX26_00769 0.28 -0.4 815,013 - MPMX26_00769 0.28 -1.7 815,013 - MPMX26_00769 0.28 +0.1 815,013 - MPMX26_00769 0.28 -0.6 815,013 - MPMX26_00769 0.28 -0.4 815,013 - MPMX26_00769 0.28 -0.4 815,013 - MPMX26_00769 0.28 +0.0 815,013 - MPMX26_00769 0.28 -0.4 815,013 - MPMX26_00769 0.28 +0.4 815,014 - MPMX26_00769 0.29 -0.3 815,029 - MPMX26_00769 0.31 +0.0 815,058 - MPMX26_00769 0.37 -0.0 815,061 - MPMX26_00769 0.37 +0.0 815,072 - MPMX26_00769 0.39 -0.7
Or see this region's nucleotide sequence