Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00412 and MPMX26_00413 are separated by 105 nucleotides MPMX26_00413 and MPMX26_00414 are separated by 68 nucleotides MPMX26_00414 and MPMX26_00415 are separated by 54 nucleotides
MPMX26_00412: MPMX26_00412 - hypothetical protein, at 442,118 to 442,207
_00412
MPMX26_00413: MPMX26_00413 - Trans-aconitate 2-methyltransferase, at 442,313 to 442,921
_00413
MPMX26_00414: MPMX26_00414 - Phosphate acetyltransferase, at 442,990 to 445,134
_00414
MPMX26_00415: MPMX26_00415 - Acetate kinase, at 445,189 to 446,403
_00415
Position (kb) 442
443
444
445
446 Strain fitness (log2 ratio) -2
-1
0
1
2 at 442.096 kb on + strand at 442.096 kb on + strand at 442.096 kb on + strand at 442.096 kb on + strand at 442.101 kb on + strand at 442.101 kb on + strand at 442.101 kb on + strand at 442.108 kb on + strand at 442.135 kb on + strand, within MPMX26_00412 at 442.166 kb on + strand, within MPMX26_00412 at 442.177 kb on + strand, within MPMX26_00412 at 442.196 kb on + strand, within MPMX26_00412 at 442.196 kb on + strand, within MPMX26_00412 at 442.196 kb on + strand, within MPMX26_00412 at 442.196 kb on + strand, within MPMX26_00412 at 442.201 kb on + strand at 442.201 kb on + strand at 442.201 kb on + strand at 442.201 kb on + strand at 442.208 kb on + strand at 442.374 kb on + strand, within MPMX26_00413 at 442.375 kb on + strand, within MPMX26_00413 at 442.413 kb on + strand, within MPMX26_00413 at 442.465 kb on + strand, within MPMX26_00413 at 442.465 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.526 kb on + strand, within MPMX26_00413 at 442.544 kb on + strand, within MPMX26_00413 at 442.619 kb on + strand, within MPMX26_00413 at 442.643 kb on + strand, within MPMX26_00413 at 442.727 kb on + strand, within MPMX26_00413 at 442.727 kb on + strand, within MPMX26_00413 at 442.727 kb on + strand, within MPMX26_00413 at 442.745 kb on + strand, within MPMX26_00413 at 442.763 kb on + strand, within MPMX26_00413 at 442.787 kb on + strand, within MPMX26_00413 at 442.787 kb on + strand, within MPMX26_00413 at 442.802 kb on + strand, within MPMX26_00413 at 442.895 kb on + strand at 442.895 kb on + strand at 443.010 kb on - strand at 443.020 kb on - strand at 443.020 kb on - strand at 443.082 kb on - strand at 443.092 kb on - strand at 443.097 kb on - strand at 443.111 kb on - strand at 443.111 kb on - strand at 443.125 kb on - strand at 443.142 kb on - strand at 443.142 kb on - strand at 443.145 kb on - strand at 443.145 kb on - strand at 443.145 kb on - strand at 443.145 kb on - strand at 443.145 kb on - strand at 443.145 kb on - strand at 443.147 kb on - strand at 443.152 kb on - strand at 443.152 kb on - strand at 443.166 kb on - strand at 443.173 kb on - strand at 443.173 kb on - strand at 443.190 kb on - strand at 443.190 kb on - strand at 443.210 kb on - strand, within MPMX26_00414 at 443.212 kb on - strand, within MPMX26_00414 at 443.223 kb on - strand, within MPMX26_00414 at 443.263 kb on - strand, within MPMX26_00414 at 443.263 kb on - strand, within MPMX26_00414 at 443.263 kb on - strand, within MPMX26_00414 at 443.263 kb on - strand, within MPMX26_00414 at 443.263 kb on - strand, within MPMX26_00414 at 443.263 kb on - strand, within MPMX26_00414 at 443.263 kb on - strand, within MPMX26_00414 at 443.263 kb on - strand, within MPMX26_00414 at 443.271 kb on - strand, within MPMX26_00414 at 443.289 kb on - strand, within MPMX26_00414 at 443.289 kb on - strand, within MPMX26_00414 at 443.289 kb on - strand, within MPMX26_00414 at 443.304 kb on - strand, within MPMX26_00414 at 443.364 kb on - strand, within MPMX26_00414 at 443.364 kb on - strand, within MPMX26_00414 at 443.404 kb on - strand, within MPMX26_00414 at 443.533 kb on - strand, within MPMX26_00414 at 443.550 kb on - strand, within MPMX26_00414 at 443.560 kb on - strand, within MPMX26_00414 at 443.560 kb on - strand, within MPMX26_00414 at 443.560 kb on - strand, within MPMX26_00414 at 443.589 kb on - strand, within MPMX26_00414 at 443.590 kb on - strand, within MPMX26_00414 at 443.590 kb on - strand, within MPMX26_00414 at 443.590 kb on - strand, within MPMX26_00414 at 443.590 kb on - strand, within MPMX26_00414 at 443.590 kb on - strand, within MPMX26_00414 at 443.590 kb on - strand, within MPMX26_00414 at 443.590 kb on - strand, within MPMX26_00414 at 443.590 kb on - strand, within MPMX26_00414 at 443.601 kb on - strand, within MPMX26_00414 at 443.626 kb on - strand, within MPMX26_00414 at 443.626 kb on - strand, within MPMX26_00414 at 443.658 kb on - strand, within MPMX26_00414 at 443.668 kb on - strand, within MPMX26_00414 at 443.668 kb on - strand, within MPMX26_00414 at 443.668 kb on - strand, within MPMX26_00414 at 443.701 kb on - strand, within MPMX26_00414 at 443.737 kb on - strand, within MPMX26_00414 at 443.772 kb on - strand, within MPMX26_00414 at 443.833 kb on - strand, within MPMX26_00414 at 443.886 kb on - strand, within MPMX26_00414 at 443.896 kb on - strand, within MPMX26_00414 at 443.896 kb on - strand, within MPMX26_00414 at 443.905 kb on - strand, within MPMX26_00414 at 443.911 kb on - strand, within MPMX26_00414 at 443.911 kb on - strand, within MPMX26_00414 at 443.982 kb on - strand, within MPMX26_00414 at 444.022 kb on - strand, within MPMX26_00414 at 444.027 kb on - strand, within MPMX26_00414 at 444.027 kb on - strand, within MPMX26_00414 at 444.027 kb on - strand, within MPMX26_00414 at 444.117 kb on - strand, within MPMX26_00414 at 444.122 kb on - strand, within MPMX26_00414 at 444.136 kb on - strand, within MPMX26_00414 at 444.138 kb on - strand, within MPMX26_00414 at 444.168 kb on - strand, within MPMX26_00414 at 444.208 kb on - strand, within MPMX26_00414 at 444.226 kb on - strand, within MPMX26_00414 at 444.231 kb on - strand, within MPMX26_00414 at 444.231 kb on - strand, within MPMX26_00414 at 444.286 kb on - strand, within MPMX26_00414 at 444.375 kb on - strand, within MPMX26_00414 at 444.387 kb on - strand, within MPMX26_00414 at 444.421 kb on - strand, within MPMX26_00414 at 444.421 kb on - strand, within MPMX26_00414 at 444.541 kb on - strand, within MPMX26_00414 at 444.549 kb on - strand, within MPMX26_00414 at 444.565 kb on - strand, within MPMX26_00414 at 444.565 kb on - strand, within MPMX26_00414 at 444.565 kb on - strand, within MPMX26_00414 at 444.616 kb on - strand, within MPMX26_00414 at 444.622 kb on - strand, within MPMX26_00414 at 444.622 kb on - strand, within MPMX26_00414 at 444.636 kb on - strand, within MPMX26_00414 at 444.670 kb on - strand, within MPMX26_00414 at 444.736 kb on - strand, within MPMX26_00414 at 444.756 kb on - strand, within MPMX26_00414 at 444.793 kb on - strand, within MPMX26_00414 at 444.793 kb on - strand, within MPMX26_00414 at 444.925 kb on + strand at 445.052 kb on - strand at 445.057 kb on - strand at 445.062 kb on - strand at 445.090 kb on - strand at 445.107 kb on - strand at 445.117 kb on - strand at 445.317 kb on - strand, within MPMX26_00415 at 445.317 kb on - strand, within MPMX26_00415 at 445.393 kb on - strand, within MPMX26_00415 at 445.395 kb on - strand, within MPMX26_00415 at 445.402 kb on - strand, within MPMX26_00415 at 445.425 kb on - strand, within MPMX26_00415 at 445.425 kb on - strand, within MPMX26_00415 at 445.456 kb on - strand, within MPMX26_00415 at 445.456 kb on - strand, within MPMX26_00415 at 445.456 kb on - strand, within MPMX26_00415 at 445.456 kb on - strand, within MPMX26_00415 at 445.479 kb on - strand, within MPMX26_00415 at 445.491 kb on - strand, within MPMX26_00415 at 445.494 kb on - strand, within MPMX26_00415 at 445.555 kb on - strand, within MPMX26_00415 at 445.555 kb on - strand, within MPMX26_00415 at 445.555 kb on - strand, within MPMX26_00415 at 445.555 kb on - strand, within MPMX26_00415 at 445.555 kb on - strand, within MPMX26_00415 at 445.555 kb on - strand, within MPMX26_00415 at 445.555 kb on - strand, within MPMX26_00415 at 445.565 kb on - strand, within MPMX26_00415 at 445.609 kb on - strand, within MPMX26_00415 at 445.612 kb on - strand, within MPMX26_00415 at 445.681 kb on - strand, within MPMX26_00415 at 445.682 kb on - strand, within MPMX26_00415 at 445.728 kb on - strand, within MPMX26_00415 at 445.730 kb on - strand, within MPMX26_00415 at 445.738 kb on - strand, within MPMX26_00415 at 445.738 kb on - strand, within MPMX26_00415 at 445.749 kb on - strand, within MPMX26_00415 at 445.773 kb on - strand, within MPMX26_00415 at 445.773 kb on - strand, within MPMX26_00415 at 445.773 kb on - strand, within MPMX26_00415 at 445.773 kb on - strand, within MPMX26_00415 at 445.796 kb on - strand, within MPMX26_00415 at 445.822 kb on - strand, within MPMX26_00415 at 445.833 kb on - strand, within MPMX26_00415 at 445.840 kb on - strand, within MPMX26_00415 at 445.840 kb on - strand, within MPMX26_00415 at 445.840 kb on - strand, within MPMX26_00415 at 445.941 kb on - strand, within MPMX26_00415 at 445.951 kb on - strand, within MPMX26_00415 at 446.047 kb on - strand, within MPMX26_00415 at 446.082 kb on - strand, within MPMX26_00415 at 446.121 kb on - strand, within MPMX26_00415 at 446.128 kb on - strand, within MPMX26_00415 at 446.134 kb on - strand, within MPMX26_00415 at 446.134 kb on - strand, within MPMX26_00415 at 446.134 kb on - strand, within MPMX26_00415
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 442,096 + +0.5 442,096 + -0.9 442,096 + +0.6 442,096 + -0.1 442,101 + +0.3 442,101 + +0.1 442,101 + -0.7 442,108 + +0.0 442,135 + MPMX26_00412 0.19 -0.8 442,166 + MPMX26_00412 0.53 +0.0 442,177 + MPMX26_00412 0.66 -0.1 442,196 + MPMX26_00412 0.87 -0.0 442,196 + MPMX26_00412 0.87 -0.1 442,196 + MPMX26_00412 0.87 +0.1 442,196 + MPMX26_00412 0.87 +0.3 442,201 + -0.5 442,201 + -1.3 442,201 + -0.0 442,201 + -0.0 442,208 + +0.7 442,374 + MPMX26_00413 0.10 +0.2 442,375 + MPMX26_00413 0.10 -0.2 442,413 + MPMX26_00413 0.16 +0.3 442,465 + MPMX26_00413 0.25 +0.7 442,465 + MPMX26_00413 0.25 +0.2 442,526 + MPMX26_00413 0.35 +0.3 442,526 + MPMX26_00413 0.35 -0.4 442,526 + MPMX26_00413 0.35 -0.4 442,526 + MPMX26_00413 0.35 +0.3 442,526 + MPMX26_00413 0.35 +0.3 442,526 + MPMX26_00413 0.35 -0.2 442,526 + MPMX26_00413 0.35 +0.0 442,526 + MPMX26_00413 0.35 +0.0 442,526 + MPMX26_00413 0.35 +0.9 442,526 + MPMX26_00413 0.35 +0.1 442,544 + MPMX26_00413 0.38 +1.3 442,619 + MPMX26_00413 0.50 +0.5 442,643 + MPMX26_00413 0.54 +0.1 442,727 + MPMX26_00413 0.68 -0.5 442,727 + MPMX26_00413 0.68 -1.0 442,727 + MPMX26_00413 0.68 +0.0 442,745 + MPMX26_00413 0.71 -0.6 442,763 + MPMX26_00413 0.74 +0.2 442,787 + MPMX26_00413 0.78 +0.0 442,787 + MPMX26_00413 0.78 -0.0 442,802 + MPMX26_00413 0.80 -0.1 442,895 + -0.1 442,895 + -0.6 443,010 - -0.0 443,020 - +0.3 443,020 - +0.9 443,082 - +0.4 443,092 - -0.5 443,097 - -0.5 443,111 - -1.5 443,111 - -0.6 443,125 - -0.7 443,142 - +0.0 443,142 - +0.1 443,145 - +0.5 443,145 - -0.1 443,145 - +0.6 443,145 - -0.5 443,145 - -0.3 443,145 - +0.1 443,147 - +0.7 443,152 - -0.2 443,152 - +0.3 443,166 - -0.9 443,173 - +0.1 443,173 - +0.2 443,190 - +0.4 443,190 - +0.4 443,210 - MPMX26_00414 0.10 +0.5 443,212 - MPMX26_00414 0.10 -2.4 443,223 - MPMX26_00414 0.11 -0.4 443,263 - MPMX26_00414 0.13 +0.2 443,263 - MPMX26_00414 0.13 +0.4 443,263 - MPMX26_00414 0.13 +0.2 443,263 - MPMX26_00414 0.13 +0.6 443,263 - MPMX26_00414 0.13 -0.3 443,263 - MPMX26_00414 0.13 +0.4 443,263 - MPMX26_00414 0.13 +0.0 443,263 - MPMX26_00414 0.13 +1.1 443,271 - MPMX26_00414 0.13 -0.1 443,289 - MPMX26_00414 0.14 +0.2 443,289 - MPMX26_00414 0.14 +0.2 443,289 - MPMX26_00414 0.14 +0.1 443,304 - MPMX26_00414 0.15 +0.5 443,364 - MPMX26_00414 0.17 -0.7 443,364 - MPMX26_00414 0.17 +1.2 443,404 - MPMX26_00414 0.19 -0.1 443,533 - MPMX26_00414 0.25 +1.8 443,550 - MPMX26_00414 0.26 +0.3 443,560 - MPMX26_00414 0.27 +0.0 443,560 - MPMX26_00414 0.27 -0.0 443,560 - MPMX26_00414 0.27 -0.4 443,589 - MPMX26_00414 0.28 +0.2 443,590 - MPMX26_00414 0.28 -1.3 443,590 - MPMX26_00414 0.28 -1.7 443,590 - MPMX26_00414 0.28 -0.2 443,590 - MPMX26_00414 0.28 +0.5 443,590 - MPMX26_00414 0.28 +0.8 443,590 - MPMX26_00414 0.28 +0.7 443,590 - MPMX26_00414 0.28 -0.3 443,590 - MPMX26_00414 0.28 +0.1 443,601 - MPMX26_00414 0.28 +0.2 443,626 - MPMX26_00414 0.30 -0.5 443,626 - MPMX26_00414 0.30 +0.3 443,658 - MPMX26_00414 0.31 +0.8 443,668 - MPMX26_00414 0.32 +0.2 443,668 - MPMX26_00414 0.32 -0.7 443,668 - MPMX26_00414 0.32 +0.2 443,701 - MPMX26_00414 0.33 -0.4 443,737 - MPMX26_00414 0.35 -0.2 443,772 - MPMX26_00414 0.36 +0.1 443,833 - MPMX26_00414 0.39 +1.3 443,886 - MPMX26_00414 0.42 -0.3 443,896 - MPMX26_00414 0.42 -0.5 443,896 - MPMX26_00414 0.42 +0.4 443,905 - MPMX26_00414 0.43 +0.2 443,911 - MPMX26_00414 0.43 +0.3 443,911 - MPMX26_00414 0.43 +0.6 443,982 - MPMX26_00414 0.46 +0.2 444,022 - MPMX26_00414 0.48 +0.5 444,027 - MPMX26_00414 0.48 +0.1 444,027 - MPMX26_00414 0.48 +0.6 444,027 - MPMX26_00414 0.48 +1.3 444,117 - MPMX26_00414 0.53 +0.7 444,122 - MPMX26_00414 0.53 -0.3 444,136 - MPMX26_00414 0.53 +0.2 444,138 - MPMX26_00414 0.54 +0.7 444,168 - MPMX26_00414 0.55 +0.4 444,208 - MPMX26_00414 0.57 +0.3 444,226 - MPMX26_00414 0.58 +0.7 444,231 - MPMX26_00414 0.58 -0.5 444,231 - MPMX26_00414 0.58 -0.5 444,286 - MPMX26_00414 0.60 -0.4 444,375 - MPMX26_00414 0.65 +0.4 444,387 - MPMX26_00414 0.65 -0.1 444,421 - MPMX26_00414 0.67 -0.3 444,421 - MPMX26_00414 0.67 +1.9 444,541 - MPMX26_00414 0.72 +1.7 444,549 - MPMX26_00414 0.73 -0.8 444,565 - MPMX26_00414 0.73 -1.0 444,565 - MPMX26_00414 0.73 +0.3 444,565 - MPMX26_00414 0.73 +1.4 444,616 - MPMX26_00414 0.76 +0.6 444,622 - MPMX26_00414 0.76 +0.3 444,622 - MPMX26_00414 0.76 +0.9 444,636 - MPMX26_00414 0.77 +0.3 444,670 - MPMX26_00414 0.78 -1.6 444,736 - MPMX26_00414 0.81 -0.1 444,756 - MPMX26_00414 0.82 +1.1 444,793 - MPMX26_00414 0.84 +0.2 444,793 - MPMX26_00414 0.84 -1.1 444,925 + +1.9 445,052 - +1.2 445,057 - +0.3 445,062 - -0.1 445,090 - +0.8 445,107 - -0.3 445,117 - -0.2 445,317 - MPMX26_00415 0.11 -0.1 445,317 - MPMX26_00415 0.11 -0.2 445,393 - MPMX26_00415 0.17 -0.1 445,395 - MPMX26_00415 0.17 +0.4 445,402 - MPMX26_00415 0.18 +0.4 445,425 - MPMX26_00415 0.19 +0.3 445,425 - MPMX26_00415 0.19 +0.7 445,456 - MPMX26_00415 0.22 +0.2 445,456 - MPMX26_00415 0.22 -0.5 445,456 - MPMX26_00415 0.22 -0.1 445,456 - MPMX26_00415 0.22 -0.7 445,479 - MPMX26_00415 0.24 -0.1 445,491 - MPMX26_00415 0.25 +0.1 445,494 - MPMX26_00415 0.25 +0.3 445,555 - MPMX26_00415 0.30 +0.6 445,555 - MPMX26_00415 0.30 +0.0 445,555 - MPMX26_00415 0.30 +0.1 445,555 - MPMX26_00415 0.30 -0.2 445,555 - MPMX26_00415 0.30 +0.5 445,555 - MPMX26_00415 0.30 +0.3 445,555 - MPMX26_00415 0.30 -0.6 445,565 - MPMX26_00415 0.31 -1.3 445,609 - MPMX26_00415 0.35 -0.1 445,612 - MPMX26_00415 0.35 +0.2 445,681 - MPMX26_00415 0.40 +0.4 445,682 - MPMX26_00415 0.41 +1.5 445,728 - MPMX26_00415 0.44 +1.0 445,730 - MPMX26_00415 0.45 -0.8 445,738 - MPMX26_00415 0.45 +0.6 445,738 - MPMX26_00415 0.45 -0.9 445,749 - MPMX26_00415 0.46 +0.8 445,773 - MPMX26_00415 0.48 -0.1 445,773 - MPMX26_00415 0.48 -0.0 445,773 - MPMX26_00415 0.48 +0.2 445,773 - MPMX26_00415 0.48 -0.1 445,796 - MPMX26_00415 0.50 +0.2 445,822 - MPMX26_00415 0.52 -1.7 445,833 - MPMX26_00415 0.53 +0.7 445,840 - MPMX26_00415 0.54 +0.2 445,840 - MPMX26_00415 0.54 -0.1 445,840 - MPMX26_00415 0.54 -0.0 445,941 - MPMX26_00415 0.62 +0.1 445,951 - MPMX26_00415 0.63 +0.5 446,047 - MPMX26_00415 0.71 +0.3 446,082 - MPMX26_00415 0.73 +1.1 446,121 - MPMX26_00415 0.77 +0.2 446,128 - MPMX26_00415 0.77 +0.3 446,134 - MPMX26_00415 0.78 -0.8 446,134 - MPMX26_00415 0.78 +0.4 446,134 - MPMX26_00415 0.78 +0.5
Or see this region's nucleotide sequence