Experiment: casaminos (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00373 and MPMX26_00374 are separated by 156 nucleotides MPMX26_00374 and MPMX26_00375 are separated by 12 nucleotides MPMX26_00375 and MPMX26_00376 are separated by 163 nucleotides
MPMX26_00373: MPMX26_00373 - Putative cation/proton antiporter YbaL, at 404,526 to 406,244
_00373
MPMX26_00374: MPMX26_00374 - 50S ribosomal protein L33, at 406,401 to 406,556
_00374
MPMX26_00375: MPMX26_00375 - 50S ribosomal protein L28, at 406,569 to 406,805
_00375
MPMX26_00376: MPMX26_00376 - Coniferyl aldehyde dehydrogenase, at 406,969 to 408,417
_00376
Position (kb) 406
407 Strain fitness (log2 ratio) -2
-1
0
1 at 405.412 kb on - strand, within MPMX26_00373 at 405.473 kb on - strand, within MPMX26_00373 at 405.480 kb on - strand, within MPMX26_00373 at 405.518 kb on - strand, within MPMX26_00373 at 405.518 kb on - strand, within MPMX26_00373 at 405.563 kb on - strand, within MPMX26_00373 at 405.575 kb on - strand, within MPMX26_00373 at 405.575 kb on - strand, within MPMX26_00373 at 405.575 kb on - strand, within MPMX26_00373 at 405.585 kb on - strand, within MPMX26_00373 at 405.681 kb on - strand, within MPMX26_00373 at 405.761 kb on - strand, within MPMX26_00373 at 405.771 kb on + strand, within MPMX26_00373 at 405.822 kb on - strand, within MPMX26_00373 at 405.822 kb on - strand, within MPMX26_00373 at 405.822 kb on - strand, within MPMX26_00373 at 405.822 kb on - strand, within MPMX26_00373 at 405.837 kb on - strand, within MPMX26_00373 at 405.839 kb on - strand, within MPMX26_00373 at 405.866 kb on - strand, within MPMX26_00373 at 405.896 kb on - strand, within MPMX26_00373 at 405.896 kb on - strand, within MPMX26_00373 at 405.896 kb on - strand, within MPMX26_00373 at 405.896 kb on - strand, within MPMX26_00373 at 405.896 kb on - strand, within MPMX26_00373 at 405.915 kb on - strand, within MPMX26_00373 at 405.921 kb on - strand, within MPMX26_00373 at 405.960 kb on - strand, within MPMX26_00373 at 405.968 kb on - strand, within MPMX26_00373 at 405.968 kb on - strand, within MPMX26_00373 at 406.002 kb on - strand, within MPMX26_00373 at 406.002 kb on - strand, within MPMX26_00373 at 406.046 kb on - strand, within MPMX26_00373 at 406.113 kb on - strand at 406.136 kb on - strand at 406.193 kb on - strand at 406.193 kb on - strand at 406.193 kb on - strand at 406.193 kb on - strand at 406.193 kb on - strand at 406.946 kb on - strand at 406.960 kb on - strand at 407.100 kb on - strand at 407.116 kb on - strand, within MPMX26_00376 at 407.116 kb on - strand, within MPMX26_00376 at 407.160 kb on - strand, within MPMX26_00376 at 407.160 kb on - strand, within MPMX26_00376 at 407.160 kb on - strand, within MPMX26_00376 at 407.160 kb on - strand, within MPMX26_00376 at 407.160 kb on - strand, within MPMX26_00376 at 407.160 kb on - strand, within MPMX26_00376 at 407.160 kb on - strand, within MPMX26_00376 at 407.182 kb on - strand, within MPMX26_00376 at 407.209 kb on - strand, within MPMX26_00376 at 407.219 kb on - strand, within MPMX26_00376 at 407.219 kb on - strand, within MPMX26_00376 at 407.219 kb on - strand, within MPMX26_00376 at 407.219 kb on - strand, within MPMX26_00376 at 407.223 kb on - strand, within MPMX26_00376 at 407.244 kb on - strand, within MPMX26_00376 at 407.249 kb on - strand, within MPMX26_00376 at 407.318 kb on + strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.331 kb on - strand, within MPMX26_00376 at 407.375 kb on + strand, within MPMX26_00376 at 407.391 kb on - strand, within MPMX26_00376 at 407.419 kb on - strand, within MPMX26_00376 at 407.468 kb on - strand, within MPMX26_00376 at 407.477 kb on + strand, within MPMX26_00376 at 407.485 kb on - strand, within MPMX26_00376 at 407.490 kb on - strand, within MPMX26_00376
Per-strain Table
Position Strand Gene LocusTag Fraction casaminos (N) remove 405,412 - MPMX26_00373 0.52 -0.3 405,473 - MPMX26_00373 0.55 -0.0 405,480 - MPMX26_00373 0.55 -0.2 405,518 - MPMX26_00373 0.58 -0.6 405,518 - MPMX26_00373 0.58 +0.1 405,563 - MPMX26_00373 0.60 -0.2 405,575 - MPMX26_00373 0.61 -0.1 405,575 - MPMX26_00373 0.61 -0.9 405,575 - MPMX26_00373 0.61 -0.6 405,585 - MPMX26_00373 0.62 -0.5 405,681 - MPMX26_00373 0.67 -0.3 405,761 - MPMX26_00373 0.72 +0.0 405,771 + MPMX26_00373 0.72 +0.3 405,822 - MPMX26_00373 0.75 +0.2 405,822 - MPMX26_00373 0.75 -0.2 405,822 - MPMX26_00373 0.75 -0.1 405,822 - MPMX26_00373 0.75 -1.2 405,837 - MPMX26_00373 0.76 -0.6 405,839 - MPMX26_00373 0.76 -0.4 405,866 - MPMX26_00373 0.78 +0.1 405,896 - MPMX26_00373 0.80 -1.7 405,896 - MPMX26_00373 0.80 +0.7 405,896 - MPMX26_00373 0.80 -0.3 405,896 - MPMX26_00373 0.80 -1.5 405,896 - MPMX26_00373 0.80 -0.4 405,915 - MPMX26_00373 0.81 -0.4 405,921 - MPMX26_00373 0.81 -1.2 405,960 - MPMX26_00373 0.83 -0.2 405,968 - MPMX26_00373 0.84 +0.6 405,968 - MPMX26_00373 0.84 +0.4 406,002 - MPMX26_00373 0.86 +0.1 406,002 - MPMX26_00373 0.86 -0.3 406,046 - MPMX26_00373 0.88 -0.3 406,113 - +0.3 406,136 - +0.4 406,193 - -0.0 406,193 - +0.6 406,193 - -1.3 406,193 - -0.2 406,193 - +0.1 406,946 - -0.2 406,960 - +0.7 407,100 - -0.0 407,116 - MPMX26_00376 0.10 -0.3 407,116 - MPMX26_00376 0.10 -0.3 407,160 - MPMX26_00376 0.13 +0.0 407,160 - MPMX26_00376 0.13 +0.4 407,160 - MPMX26_00376 0.13 -0.4 407,160 - MPMX26_00376 0.13 -0.1 407,160 - MPMX26_00376 0.13 +1.1 407,160 - MPMX26_00376 0.13 -2.7 407,160 - MPMX26_00376 0.13 +0.3 407,182 - MPMX26_00376 0.15 -0.2 407,209 - MPMX26_00376 0.17 +0.0 407,219 - MPMX26_00376 0.17 -0.2 407,219 - MPMX26_00376 0.17 +0.2 407,219 - MPMX26_00376 0.17 -0.1 407,219 - MPMX26_00376 0.17 +0.2 407,223 - MPMX26_00376 0.18 +0.2 407,244 - MPMX26_00376 0.19 -0.2 407,249 - MPMX26_00376 0.19 -0.8 407,318 + MPMX26_00376 0.24 -0.8 407,331 - MPMX26_00376 0.25 +0.2 407,331 - MPMX26_00376 0.25 -0.2 407,331 - MPMX26_00376 0.25 +0.8 407,331 - MPMX26_00376 0.25 -0.3 407,331 - MPMX26_00376 0.25 -0.3 407,331 - MPMX26_00376 0.25 +0.1 407,331 - MPMX26_00376 0.25 -0.2 407,331 - MPMX26_00376 0.25 -0.3 407,331 - MPMX26_00376 0.25 +0.5 407,331 - MPMX26_00376 0.25 +0.0 407,331 - MPMX26_00376 0.25 +0.3 407,331 - MPMX26_00376 0.25 +0.5 407,331 - MPMX26_00376 0.25 -0.4 407,331 - MPMX26_00376 0.25 +0.6 407,375 + MPMX26_00376 0.28 -0.3 407,391 - MPMX26_00376 0.29 -0.4 407,419 - MPMX26_00376 0.31 -0.1 407,468 - MPMX26_00376 0.34 +0.0 407,477 + MPMX26_00376 0.35 -0.4 407,485 - MPMX26_00376 0.36 -0.2 407,490 - MPMX26_00376 0.36 -0.2
Or see this region's nucleotide sequence