Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00371

Experiment: casaminos (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00369 and MPMX26_00370 are separated by 87 nucleotidesMPMX26_00370 and MPMX26_00371 are separated by 262 nucleotidesMPMX26_00371 and MPMX26_00372 are separated by 106 nucleotidesMPMX26_00372 and MPMX26_00373 are separated by 69 nucleotides MPMX26_00369: MPMX26_00369 - ATP-dependent DNA helicase PcrA, at 400,987 to 402,966 _00369 MPMX26_00370: MPMX26_00370 - hypothetical protein, at 403,054 to 403,305 _00370 MPMX26_00371: MPMX26_00371 - hypothetical protein, at 403,568 to 404,071 _00371 MPMX26_00372: MPMX26_00372 - hypothetical protein, at 404,178 to 404,456 _00372 MPMX26_00373: MPMX26_00373 - Putative cation/proton antiporter YbaL, at 404,526 to 406,244 _00373 Position (kb) 403 404 405Strain fitness (log2 ratio) -1 0 1at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.580 kb on + strand, within MPMX26_00369at 402.585 kb on + strand, within MPMX26_00369at 402.595 kb on + strand, within MPMX26_00369at 402.615 kb on + strand, within MPMX26_00369at 402.616 kb on + strand, within MPMX26_00369at 402.616 kb on + strand, within MPMX26_00369at 402.618 kb on + strand, within MPMX26_00369at 402.637 kb on + strand, within MPMX26_00369at 402.680 kb on + strand, within MPMX26_00369at 402.680 kb on + strand, within MPMX26_00369at 402.688 kb on - strand, within MPMX26_00369at 402.690 kb on + strand, within MPMX26_00369at 402.690 kb on + strand, within MPMX26_00369at 402.690 kb on + strand, within MPMX26_00369at 402.705 kb on + strand, within MPMX26_00369at 402.705 kb on + strand, within MPMX26_00369at 402.713 kb on - strand, within MPMX26_00369at 402.724 kb on + strand, within MPMX26_00369at 402.736 kb on + strand, within MPMX26_00369at 402.736 kb on + strand, within MPMX26_00369at 402.772 kb on + strandat 402.788 kb on + strandat 402.871 kb on + strandat 402.979 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.021 kb on + strandat 403.073 kb on + strandat 403.073 kb on + strandat 403.083 kb on + strand, within MPMX26_00370at 403.104 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.120 kb on + strand, within MPMX26_00370at 403.121 kb on - strand, within MPMX26_00370at 403.127 kb on + strand, within MPMX26_00370at 403.131 kb on + strand, within MPMX26_00370at 403.136 kb on + strand, within MPMX26_00370at 403.145 kb on + strand, within MPMX26_00370at 403.145 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.234 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.237 kb on + strand, within MPMX26_00370at 403.237 kb on + strand, within MPMX26_00370at 403.237 kb on + strand, within MPMX26_00370at 403.244 kb on + strand, within MPMX26_00370at 403.244 kb on + strand, within MPMX26_00370at 403.259 kb on + strand, within MPMX26_00370at 403.272 kb on + strand, within MPMX26_00370at 403.293 kb on + strandat 403.293 kb on + strandat 403.299 kb on + strandat 403.319 kb on + strandat 403.570 kb on + strandat 403.577 kb on + strandat 403.585 kb on + strandat 403.585 kb on + strandat 403.625 kb on + strand, within MPMX26_00371at 403.625 kb on + strand, within MPMX26_00371at 403.663 kb on + strand, within MPMX26_00371at 403.669 kb on + strand, within MPMX26_00371at 403.669 kb on + strand, within MPMX26_00371at 403.675 kb on + strand, within MPMX26_00371at 403.691 kb on + strand, within MPMX26_00371at 403.691 kb on + strand, within MPMX26_00371at 403.772 kb on + strand, within MPMX26_00371at 403.772 kb on + strand, within MPMX26_00371at 403.818 kb on + strand, within MPMX26_00371at 403.846 kb on + strand, within MPMX26_00371at 403.879 kb on + strand, within MPMX26_00371at 403.909 kb on + strand, within MPMX26_00371at 404.016 kb on + strand, within MPMX26_00371at 404.021 kb on + strandat 404.065 kb on + strandat 404.078 kb on + strandat 404.138 kb on + strandat 404.139 kb on + strandat 404.158 kb on + strandat 404.173 kb on + strandat 404.182 kb on + strandat 404.182 kb on + strandat 404.182 kb on + strandat 404.182 kb on + strandat 404.182 kb on + strandat 404.182 kb on + strandat 404.213 kb on + strand, within MPMX26_00372at 404.223 kb on + strand, within MPMX26_00372at 404.230 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.240 kb on + strand, within MPMX26_00372at 404.259 kb on + strand, within MPMX26_00372at 404.259 kb on + strand, within MPMX26_00372at 404.264 kb on + strand, within MPMX26_00372at 404.264 kb on + strand, within MPMX26_00372at 404.318 kb on + strand, within MPMX26_00372at 404.319 kb on + strand, within MPMX26_00372at 404.319 kb on + strand, within MPMX26_00372at 404.319 kb on + strand, within MPMX26_00372at 404.325 kb on + strand, within MPMX26_00372at 404.360 kb on + strand, within MPMX26_00372at 404.360 kb on + strand, within MPMX26_00372at 404.360 kb on + strand, within MPMX26_00372at 404.360 kb on + strand, within MPMX26_00372at 404.360 kb on + strand, within MPMX26_00372at 404.360 kb on + strand, within MPMX26_00372at 404.360 kb on + strand, within MPMX26_00372at 404.362 kb on + strand, within MPMX26_00372at 404.362 kb on + strand, within MPMX26_00372at 404.401 kb on + strand, within MPMX26_00372at 404.418 kb on + strand, within MPMX26_00372at 404.418 kb on + strand, within MPMX26_00372at 404.455 kb on + strandat 404.455 kb on + strandat 404.455 kb on + strandat 404.533 kb on + strandat 404.537 kb on + strandat 404.547 kb on - strandat 404.547 kb on - strandat 404.547 kb on - strandat 404.547 kb on - strandat 404.547 kb on - strandat 404.562 kb on - strandat 404.572 kb on - strandat 404.652 kb on - strandat 404.681 kb on - strandat 404.681 kb on - strandat 404.681 kb on - strandat 404.681 kb on - strandat 404.681 kb on - strandat 404.737 kb on - strand, within MPMX26_00373at 404.739 kb on - strand, within MPMX26_00373at 404.747 kb on - strand, within MPMX26_00373at 404.747 kb on - strand, within MPMX26_00373at 404.751 kb on + strand, within MPMX26_00373at 404.820 kb on - strand, within MPMX26_00373at 404.823 kb on - strand, within MPMX26_00373at 404.823 kb on - strand, within MPMX26_00373at 404.833 kb on - strand, within MPMX26_00373at 404.833 kb on - strand, within MPMX26_00373at 404.835 kb on - strand, within MPMX26_00373at 404.978 kb on - strand, within MPMX26_00373at 405.018 kb on - strand, within MPMX26_00373at 405.018 kb on - strand, within MPMX26_00373at 405.018 kb on - strand, within MPMX26_00373at 405.038 kb on - strand, within MPMX26_00373at 405.038 kb on - strand, within MPMX26_00373at 405.042 kb on - strand, within MPMX26_00373at 405.065 kb on - strand, within MPMX26_00373

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
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402,570 + MPMX26_00369 0.80 -0.2
402,570 + MPMX26_00369 0.80 +0.4
402,570 + MPMX26_00369 0.80 -0.5
402,570 + MPMX26_00369 0.80 +0.0
402,570 + MPMX26_00369 0.80 +0.4
402,570 + MPMX26_00369 0.80 -0.3
402,570 + MPMX26_00369 0.80 +0.5
402,570 + MPMX26_00369 0.80 +0.3
402,580 + MPMX26_00369 0.80 -1.2
402,585 + MPMX26_00369 0.81 -0.6
402,595 + MPMX26_00369 0.81 -0.7
402,615 + MPMX26_00369 0.82 +0.4
402,616 + MPMX26_00369 0.82 +0.1
402,616 + MPMX26_00369 0.82 +0.1
402,618 + MPMX26_00369 0.82 -0.1
402,637 + MPMX26_00369 0.83 +0.1
402,680 + MPMX26_00369 0.86 +0.6
402,680 + MPMX26_00369 0.86 +0.9
402,688 - MPMX26_00369 0.86 +0.3
402,690 + MPMX26_00369 0.86 +0.3
402,690 + MPMX26_00369 0.86 -0.1
402,690 + MPMX26_00369 0.86 +0.4
402,705 + MPMX26_00369 0.87 -0.8
402,705 + MPMX26_00369 0.87 -0.8
402,713 - MPMX26_00369 0.87 -1.6
402,724 + MPMX26_00369 0.88 -0.1
402,736 + MPMX26_00369 0.88 +0.4
402,736 + MPMX26_00369 0.88 +1.0
402,772 + +0.2
402,788 + +0.4
402,871 + +0.3
402,979 + +0.6
403,006 + +0.0
403,006 + +0.3
403,006 + +0.6
403,006 + -0.2
403,006 + -0.1
403,006 + +0.6
403,021 + +0.0
403,073 + +0.1
403,073 + -0.1
403,083 + MPMX26_00370 0.12 +0.1
403,104 + MPMX26_00370 0.20 +0.2
403,113 + MPMX26_00370 0.23 +0.2
403,113 + MPMX26_00370 0.23 +0.4
403,113 + MPMX26_00370 0.23 +0.7
403,113 + MPMX26_00370 0.23 -0.0
403,113 + MPMX26_00370 0.23 +0.3
403,113 + MPMX26_00370 0.23 -0.4
403,113 + MPMX26_00370 0.23 -0.2
403,113 + MPMX26_00370 0.23 -0.3
403,113 + MPMX26_00370 0.23 -0.8
403,113 + MPMX26_00370 0.23 +0.0
403,113 + MPMX26_00370 0.23 +0.2
403,113 + MPMX26_00370 0.23 +0.1
403,113 + MPMX26_00370 0.23 +0.4
403,120 + MPMX26_00370 0.26 +0.6
403,121 - MPMX26_00370 0.27 +0.1
403,127 + MPMX26_00370 0.29 +0.1
403,131 + MPMX26_00370 0.31 +0.1
403,136 + MPMX26_00370 0.33 -0.1
403,145 + MPMX26_00370 0.36 +0.8
403,145 + MPMX26_00370 0.36 +0.2
403,173 + MPMX26_00370 0.47 +0.9
403,173 + MPMX26_00370 0.47 +0.2
403,173 + MPMX26_00370 0.47 +0.1
403,173 + MPMX26_00370 0.47 -0.3
403,173 + MPMX26_00370 0.47 +0.1
403,173 + MPMX26_00370 0.47 +0.6
403,234 + MPMX26_00370 0.71 -0.2
403,236 + MPMX26_00370 0.72 -0.1
403,236 + MPMX26_00370 0.72 -0.1
403,236 + MPMX26_00370 0.72 +0.1
403,236 + MPMX26_00370 0.72 +0.1
403,236 + MPMX26_00370 0.72 -0.2
403,236 + MPMX26_00370 0.72 +0.3
403,237 + MPMX26_00370 0.73 -0.5
403,237 + MPMX26_00370 0.73 -0.0
403,237 + MPMX26_00370 0.73 +0.2
403,244 + MPMX26_00370 0.75 +0.1
403,244 + MPMX26_00370 0.75 -0.6
403,259 + MPMX26_00370 0.81 +0.4
403,272 + MPMX26_00370 0.87 -0.0
403,293 + -0.2
403,293 + +0.2
403,299 + -0.2
403,319 + +0.2
403,570 + +0.8
403,577 + +0.0
403,585 + -0.3
403,585 + +0.2
403,625 + MPMX26_00371 0.11 +0.7
403,625 + MPMX26_00371 0.11 +1.0
403,663 + MPMX26_00371 0.19 +0.5
403,669 + MPMX26_00371 0.20 +0.5
403,669 + MPMX26_00371 0.20 +0.4
403,675 + MPMX26_00371 0.21 +0.7
403,691 + MPMX26_00371 0.24 -0.1
403,691 + MPMX26_00371 0.24 +0.1
403,772 + MPMX26_00371 0.40 +0.8
403,772 + MPMX26_00371 0.40 +0.4
403,818 + MPMX26_00371 0.50 +0.3
403,846 + MPMX26_00371 0.55 +0.1
403,879 + MPMX26_00371 0.62 +0.2
403,909 + MPMX26_00371 0.68 +0.2
404,016 + MPMX26_00371 0.89 +0.2
404,021 + +0.1
404,065 + +1.0
404,078 + -1.3
404,138 + -0.5
404,139 + +0.1
404,158 + +0.3
404,173 + +0.1
404,182 + +0.0
404,182 + +0.1
404,182 + +0.4
404,182 + +0.8
404,182 + +0.6
404,182 + -0.9
404,213 + MPMX26_00372 0.13 -0.1
404,223 + MPMX26_00372 0.16 -0.3
404,230 + MPMX26_00372 0.19 +0.3
404,240 + MPMX26_00372 0.22 +1.0
404,240 + MPMX26_00372 0.22 +0.2
404,240 + MPMX26_00372 0.22 +0.4
404,240 + MPMX26_00372 0.22 +0.5
404,240 + MPMX26_00372 0.22 +0.2
404,240 + MPMX26_00372 0.22 +0.5
404,240 + MPMX26_00372 0.22 +0.1
404,240 + MPMX26_00372 0.22 +0.3
404,240 + MPMX26_00372 0.22 +0.2
404,240 + MPMX26_00372 0.22 -0.0
404,240 + MPMX26_00372 0.22 +0.2
404,240 + MPMX26_00372 0.22 +0.4
404,259 + MPMX26_00372 0.29 -0.1
404,259 + MPMX26_00372 0.29 +0.0
404,264 + MPMX26_00372 0.31 +0.1
404,264 + MPMX26_00372 0.31 -0.3
404,318 + MPMX26_00372 0.50 +0.5
404,319 + MPMX26_00372 0.51 +0.2
404,319 + MPMX26_00372 0.51 +0.2
404,319 + MPMX26_00372 0.51 +0.6
404,325 + MPMX26_00372 0.53 -0.1
404,360 + MPMX26_00372 0.65 -0.4
404,360 + MPMX26_00372 0.65 +1.1
404,360 + MPMX26_00372 0.65 -0.2
404,360 + MPMX26_00372 0.65 +0.4
404,360 + MPMX26_00372 0.65 -0.0
404,360 + MPMX26_00372 0.65 +0.3
404,360 + MPMX26_00372 0.65 +1.3
404,362 + MPMX26_00372 0.66 +0.1
404,362 + MPMX26_00372 0.66 -0.5
404,401 + MPMX26_00372 0.80 -0.2
404,418 + MPMX26_00372 0.86 +0.2
404,418 + MPMX26_00372 0.86 +1.3
404,455 + -0.3
404,455 + -0.0
404,455 + +0.1
404,533 + +0.6
404,537 + -0.5
404,547 - -0.3
404,547 - +1.4
404,547 - -0.4
404,547 - +0.0
404,547 - +0.5
404,562 - +0.2
404,572 - +0.2
404,652 - +0.2
404,681 - +0.3
404,681 - +0.3
404,681 - +0.2
404,681 - -0.0
404,681 - -0.9
404,737 - MPMX26_00373 0.12 -0.8
404,739 - MPMX26_00373 0.12 +0.5
404,747 - MPMX26_00373 0.13 +0.2
404,747 - MPMX26_00373 0.13 +0.5
404,751 + MPMX26_00373 0.13 +0.2
404,820 - MPMX26_00373 0.17 +0.7
404,823 - MPMX26_00373 0.17 +0.4
404,823 - MPMX26_00373 0.17 -0.1
404,833 - MPMX26_00373 0.18 -0.5
404,833 - MPMX26_00373 0.18 +0.7
404,835 - MPMX26_00373 0.18 -0.5
404,978 - MPMX26_00373 0.26 -0.5
405,018 - MPMX26_00373 0.29 -0.0
405,018 - MPMX26_00373 0.29 -0.4
405,018 - MPMX26_00373 0.29 -0.3
405,038 - MPMX26_00373 0.30 -0.2
405,038 - MPMX26_00373 0.30 +1.1
405,042 - MPMX26_00373 0.30 +0.1
405,065 - MPMX26_00373 0.31 +0.5

Or see this region's nucleotide sequence