Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00057

Experiment: casaminos (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00056 and MPMX26_00057 overlap by 8 nucleotidesMPMX26_00057 and MPMX26_00058 overlap by 4 nucleotides MPMX26_00056: MPMX26_00056 - Putative glycosyltransferase EpsF, at 61,568 to 62,689 _00056 MPMX26_00057: MPMX26_00057 - hypothetical protein, at 62,682 to 63,815 _00057 MPMX26_00058: MPMX26_00058 - N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase, at 63,812 to 64,954 _00058 Position (kb) 62 63 64Strain fitness (log2 ratio) -2 -1 0 1 2at 61.691 kb on + strand, within MPMX26_00056at 61.711 kb on + strand, within MPMX26_00056at 61.826 kb on + strand, within MPMX26_00056at 61.920 kb on + strand, within MPMX26_00056at 61.920 kb on + strand, within MPMX26_00056at 61.920 kb on + strand, within MPMX26_00056at 61.920 kb on + strand, within MPMX26_00056at 61.928 kb on - strand, within MPMX26_00056at 61.947 kb on + strand, within MPMX26_00056at 61.997 kb on + strand, within MPMX26_00056at 61.997 kb on + strand, within MPMX26_00056at 62.007 kb on + strand, within MPMX26_00056at 62.046 kb on + strand, within MPMX26_00056at 62.082 kb on + strand, within MPMX26_00056at 62.082 kb on + strand, within MPMX26_00056at 62.170 kb on + strand, within MPMX26_00056at 62.237 kb on + strand, within MPMX26_00056at 62.288 kb on + strand, within MPMX26_00056at 62.379 kb on + strand, within MPMX26_00056at 62.422 kb on + strand, within MPMX26_00056at 62.452 kb on + strand, within MPMX26_00056at 62.454 kb on + strand, within MPMX26_00056at 62.475 kb on + strand, within MPMX26_00056at 62.475 kb on + strand, within MPMX26_00056at 62.475 kb on + strand, within MPMX26_00056at 62.475 kb on + strand, within MPMX26_00056at 62.482 kb on + strand, within MPMX26_00056at 62.585 kb on + strandat 62.623 kb on + strandat 62.953 kb on + strand, within MPMX26_00057at 62.953 kb on + strand, within MPMX26_00057at 62.953 kb on + strand, within MPMX26_00057at 62.960 kb on - strand, within MPMX26_00057at 62.961 kb on - strand, within MPMX26_00057at 62.962 kb on - strand, within MPMX26_00057at 63.111 kb on + strand, within MPMX26_00057at 63.111 kb on + strand, within MPMX26_00057at 63.111 kb on + strand, within MPMX26_00057at 63.111 kb on + strand, within MPMX26_00057at 63.111 kb on + strand, within MPMX26_00057at 63.111 kb on + strand, within MPMX26_00057at 63.111 kb on + strand, within MPMX26_00057at 63.235 kb on + strand, within MPMX26_00057at 63.284 kb on + strand, within MPMX26_00057at 63.320 kb on + strand, within MPMX26_00057at 63.412 kb on + strand, within MPMX26_00057at 63.412 kb on + strand, within MPMX26_00057at 63.412 kb on + strand, within MPMX26_00057at 63.420 kb on - strand, within MPMX26_00057at 63.451 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.473 kb on + strand, within MPMX26_00057at 63.481 kb on - strand, within MPMX26_00057at 63.503 kb on + strand, within MPMX26_00057at 63.503 kb on + strand, within MPMX26_00057at 63.511 kb on - strand, within MPMX26_00057at 63.672 kb on + strand, within MPMX26_00057at 63.785 kb on + strandat 63.848 kb on + strandat 63.920 kb on + strandat 64.003 kb on + strand, within MPMX26_00058at 64.003 kb on + strand, within MPMX26_00058at 64.003 kb on + strand, within MPMX26_00058at 64.003 kb on + strand, within MPMX26_00058at 64.105 kb on + strand, within MPMX26_00058at 64.163 kb on + strand, within MPMX26_00058at 64.163 kb on + strand, within MPMX26_00058at 64.163 kb on + strand, within MPMX26_00058at 64.163 kb on + strand, within MPMX26_00058at 64.163 kb on + strand, within MPMX26_00058at 64.163 kb on + strand, within MPMX26_00058at 64.163 kb on + strand, within MPMX26_00058at 64.163 kb on + strand, within MPMX26_00058at 64.233 kb on + strand, within MPMX26_00058at 64.243 kb on + strand, within MPMX26_00058at 64.260 kb on + strand, within MPMX26_00058at 64.315 kb on + strand, within MPMX26_00058at 64.315 kb on + strand, within MPMX26_00058at 64.315 kb on + strand, within MPMX26_00058at 64.343 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.353 kb on + strand, within MPMX26_00058at 64.358 kb on + strand, within MPMX26_00058at 64.359 kb on + strand, within MPMX26_00058at 64.360 kb on + strand, within MPMX26_00058at 64.387 kb on + strand, within MPMX26_00058at 64.650 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.655 kb on + strand, within MPMX26_00058at 64.682 kb on + strand, within MPMX26_00058at 64.682 kb on + strand, within MPMX26_00058at 64.682 kb on + strand, within MPMX26_00058at 64.682 kb on + strand, within MPMX26_00058at 64.690 kb on - strand, within MPMX26_00058at 64.697 kb on + strand, within MPMX26_00058at 64.697 kb on + strand, within MPMX26_00058at 64.705 kb on + strand, within MPMX26_00058

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
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61,691 + MPMX26_00056 0.11 +0.4
61,711 + MPMX26_00056 0.13 +0.4
61,826 + MPMX26_00056 0.23 -0.8
61,920 + MPMX26_00056 0.31 -0.0
61,920 + MPMX26_00056 0.31 -0.3
61,920 + MPMX26_00056 0.31 +0.3
61,920 + MPMX26_00056 0.31 -0.1
61,928 - MPMX26_00056 0.32 +0.5
61,947 + MPMX26_00056 0.34 +0.1
61,997 + MPMX26_00056 0.38 -0.7
61,997 + MPMX26_00056 0.38 -0.3
62,007 + MPMX26_00056 0.39 +0.2
62,046 + MPMX26_00056 0.43 +0.2
62,082 + MPMX26_00056 0.46 -0.4
62,082 + MPMX26_00056 0.46 +0.5
62,170 + MPMX26_00056 0.54 -0.1
62,237 + MPMX26_00056 0.60 -0.2
62,288 + MPMX26_00056 0.64 +0.5
62,379 + MPMX26_00056 0.72 -0.7
62,422 + MPMX26_00056 0.76 -0.7
62,452 + MPMX26_00056 0.79 +0.0
62,454 + MPMX26_00056 0.79 +0.6
62,475 + MPMX26_00056 0.81 -1.7
62,475 + MPMX26_00056 0.81 -0.3
62,475 + MPMX26_00056 0.81 -0.3
62,475 + MPMX26_00056 0.81 -0.8
62,482 + MPMX26_00056 0.81 -0.1
62,585 + -0.3
62,623 + -1.1
62,953 + MPMX26_00057 0.24 +0.5
62,953 + MPMX26_00057 0.24 +0.9
62,953 + MPMX26_00057 0.24 +0.7
62,960 - MPMX26_00057 0.25 +1.0
62,961 - MPMX26_00057 0.25 +0.5
62,962 - MPMX26_00057 0.25 +0.7
63,111 + MPMX26_00057 0.38 +0.7
63,111 + MPMX26_00057 0.38 +0.1
63,111 + MPMX26_00057 0.38 -0.1
63,111 + MPMX26_00057 0.38 +0.5
63,111 + MPMX26_00057 0.38 +0.3
63,111 + MPMX26_00057 0.38 +0.4
63,111 + MPMX26_00057 0.38 +0.3
63,235 + MPMX26_00057 0.49 +0.7
63,284 + MPMX26_00057 0.53 +0.2
63,320 + MPMX26_00057 0.56 +0.3
63,412 + MPMX26_00057 0.64 +0.2
63,412 + MPMX26_00057 0.64 +0.3
63,412 + MPMX26_00057 0.64 +0.3
63,420 - MPMX26_00057 0.65 +0.3
63,451 + MPMX26_00057 0.68 +0.8
63,473 + MPMX26_00057 0.70 -0.6
63,473 + MPMX26_00057 0.70 +0.3
63,473 + MPMX26_00057 0.70 +0.2
63,473 + MPMX26_00057 0.70 +0.5
63,473 + MPMX26_00057 0.70 -0.2
63,473 + MPMX26_00057 0.70 +0.5
63,473 + MPMX26_00057 0.70 +0.1
63,473 + MPMX26_00057 0.70 +0.5
63,473 + MPMX26_00057 0.70 +0.7
63,473 + MPMX26_00057 0.70 +0.1
63,481 - MPMX26_00057 0.70 -1.4
63,503 + MPMX26_00057 0.72 -0.3
63,503 + MPMX26_00057 0.72 +0.3
63,511 - MPMX26_00057 0.73 +1.2
63,672 + MPMX26_00057 0.87 +0.1
63,785 + +0.4
63,848 + +0.7
63,920 + +2.5
64,003 + MPMX26_00058 0.17 -0.1
64,003 + MPMX26_00058 0.17 +0.8
64,003 + MPMX26_00058 0.17 +0.7
64,003 + MPMX26_00058 0.17 -2.7
64,105 + MPMX26_00058 0.26 +0.3
64,163 + MPMX26_00058 0.31 +0.4
64,163 + MPMX26_00058 0.31 +0.7
64,163 + MPMX26_00058 0.31 +0.9
64,163 + MPMX26_00058 0.31 +0.3
64,163 + MPMX26_00058 0.31 +0.3
64,163 + MPMX26_00058 0.31 +0.4
64,163 + MPMX26_00058 0.31 +1.2
64,163 + MPMX26_00058 0.31 +0.9
64,233 + MPMX26_00058 0.37 +0.6
64,243 + MPMX26_00058 0.38 -0.2
64,260 + MPMX26_00058 0.39 +1.0
64,315 + MPMX26_00058 0.44 +0.0
64,315 + MPMX26_00058 0.44 -1.3
64,315 + MPMX26_00058 0.44 +0.5
64,343 + MPMX26_00058 0.46 +0.5
64,353 + MPMX26_00058 0.47 -0.3
64,353 + MPMX26_00058 0.47 +0.2
64,353 + MPMX26_00058 0.47 +1.7
64,353 + MPMX26_00058 0.47 -0.6
64,353 + MPMX26_00058 0.47 +0.4
64,353 + MPMX26_00058 0.47 -1.3
64,353 + MPMX26_00058 0.47 -1.0
64,353 + MPMX26_00058 0.47 +1.7
64,353 + MPMX26_00058 0.47 +0.4
64,353 + MPMX26_00058 0.47 -0.5
64,353 + MPMX26_00058 0.47 +0.6
64,353 + MPMX26_00058 0.47 -0.0
64,353 + MPMX26_00058 0.47 +0.3
64,358 + MPMX26_00058 0.48 +1.4
64,359 + MPMX26_00058 0.48 +0.2
64,360 + MPMX26_00058 0.48 -0.1
64,387 + MPMX26_00058 0.50 +0.0
64,650 + MPMX26_00058 0.73 -0.4
64,655 + MPMX26_00058 0.74 +0.5
64,655 + MPMX26_00058 0.74 +0.3
64,655 + MPMX26_00058 0.74 +1.4
64,655 + MPMX26_00058 0.74 +0.1
64,655 + MPMX26_00058 0.74 -0.7
64,655 + MPMX26_00058 0.74 -2.2
64,682 + MPMX26_00058 0.76 +0.6
64,682 + MPMX26_00058 0.76 +0.5
64,682 + MPMX26_00058 0.76 -0.3
64,682 + MPMX26_00058 0.76 -0.2
64,690 - MPMX26_00058 0.77 +1.3
64,697 + MPMX26_00058 0.77 -1.3
64,697 + MPMX26_00058 0.77 +0.4
64,705 + MPMX26_00058 0.78 -0.7

Or see this region's nucleotide sequence