Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00023

Experiment: casaminos (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00021 and MPMX26_00022 are separated by 87 nucleotidesMPMX26_00022 and MPMX26_00023 are separated by 38 nucleotidesMPMX26_00023 and MPMX26_00024 are separated by 413 nucleotides MPMX26_00021: MPMX26_00021 - hypothetical protein, at 24,288 to 25,469 _00021 MPMX26_00022: MPMX26_00022 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 25,557 to 26,138 _00022 MPMX26_00023: MPMX26_00023 - HTH-type transcriptional regulator RutR, at 26,177 to 26,842 _00023 MPMX26_00024: MPMX26_00024 - Aliphatic sulfonates import ATP-binding protein SsuB, at 27,256 to 28,050 _00024 Position (kb) 26 27Strain fitness (log2 ratio) -2 -1 0 1 2at 25.239 kb on - strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.260 kb on + strand, within MPMX26_00021at 25.303 kb on + strand, within MPMX26_00021at 25.316 kb on + strand, within MPMX26_00021at 25.383 kb on + strandat 25.401 kb on + strandat 25.425 kb on + strandat 25.425 kb on + strandat 25.427 kb on + strandat 25.471 kb on - strandat 25.481 kb on + strandat 25.501 kb on - strandat 25.560 kb on + strandat 25.572 kb on + strandat 25.577 kb on + strandat 25.577 kb on + strandat 25.598 kb on + strandat 25.600 kb on + strandat 25.600 kb on + strandat 25.614 kb on + strandat 25.619 kb on + strand, within MPMX26_00022at 25.624 kb on + strand, within MPMX26_00022at 25.632 kb on - strand, within MPMX26_00022at 25.655 kb on + strand, within MPMX26_00022at 25.655 kb on + strand, within MPMX26_00022at 25.655 kb on + strand, within MPMX26_00022at 25.655 kb on + strand, within MPMX26_00022at 25.663 kb on - strand, within MPMX26_00022at 25.760 kb on + strand, within MPMX26_00022at 25.769 kb on + strand, within MPMX26_00022at 25.774 kb on + strand, within MPMX26_00022at 25.774 kb on + strand, within MPMX26_00022at 25.793 kb on + strand, within MPMX26_00022at 25.803 kb on + strand, within MPMX26_00022at 25.803 kb on + strand, within MPMX26_00022at 25.863 kb on - strand, within MPMX26_00022at 25.863 kb on - strand, within MPMX26_00022at 25.866 kb on + strand, within MPMX26_00022at 25.882 kb on - strand, within MPMX26_00022at 25.898 kb on + strand, within MPMX26_00022at 25.898 kb on + strand, within MPMX26_00022at 25.906 kb on - strand, within MPMX26_00022at 25.916 kb on - strand, within MPMX26_00022at 25.938 kb on - strand, within MPMX26_00022at 25.942 kb on + strand, within MPMX26_00022at 25.964 kb on + strand, within MPMX26_00022at 25.965 kb on + strand, within MPMX26_00022at 25.966 kb on + strand, within MPMX26_00022at 25.966 kb on + strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.974 kb on - strand, within MPMX26_00022at 25.976 kb on + strand, within MPMX26_00022at 25.984 kb on - strand, within MPMX26_00022at 26.042 kb on - strand, within MPMX26_00022at 26.042 kb on - strand, within MPMX26_00022at 26.050 kb on - strand, within MPMX26_00022at 26.050 kb on - strand, within MPMX26_00022at 26.052 kb on + strand, within MPMX26_00022at 26.052 kb on + strand, within MPMX26_00022at 26.060 kb on - strand, within MPMX26_00022at 26.060 kb on - strand, within MPMX26_00022at 26.060 kb on - strand, within MPMX26_00022at 26.060 kb on - strand, within MPMX26_00022at 26.075 kb on + strand, within MPMX26_00022at 26.086 kb on - strandat 26.086 kb on - strandat 26.086 kb on - strandat 26.086 kb on - strandat 26.086 kb on - strandat 26.108 kb on - strandat 26.109 kb on - strandat 26.166 kb on - strandat 26.230 kb on - strandat 26.230 kb on - strandat 26.247 kb on - strand, within MPMX26_00023at 26.252 kb on - strand, within MPMX26_00023at 26.255 kb on - strand, within MPMX26_00023at 26.260 kb on - strand, within MPMX26_00023at 26.268 kb on - strand, within MPMX26_00023at 26.280 kb on - strand, within MPMX26_00023at 26.280 kb on - strand, within MPMX26_00023at 26.288 kb on - strand, within MPMX26_00023at 26.295 kb on - strand, within MPMX26_00023at 26.295 kb on - strand, within MPMX26_00023at 26.357 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.450 kb on - strand, within MPMX26_00023at 26.451 kb on - strand, within MPMX26_00023at 26.510 kb on - strand, within MPMX26_00023at 26.520 kb on - strand, within MPMX26_00023at 26.520 kb on - strand, within MPMX26_00023at 26.549 kb on - strand, within MPMX26_00023at 26.555 kb on - strand, within MPMX26_00023at 26.571 kb on - strand, within MPMX26_00023at 26.576 kb on - strand, within MPMX26_00023at 26.576 kb on - strand, within MPMX26_00023at 26.619 kb on - strand, within MPMX26_00023at 26.635 kb on - strand, within MPMX26_00023at 26.635 kb on - strand, within MPMX26_00023at 26.635 kb on - strand, within MPMX26_00023at 26.635 kb on - strand, within MPMX26_00023at 26.635 kb on - strand, within MPMX26_00023at 26.637 kb on - strand, within MPMX26_00023at 26.637 kb on - strand, within MPMX26_00023at 26.643 kb on - strand, within MPMX26_00023at 26.653 kb on - strand, within MPMX26_00023at 26.653 kb on - strand, within MPMX26_00023at 26.653 kb on - strand, within MPMX26_00023at 26.653 kb on - strand, within MPMX26_00023at 26.661 kb on - strand, within MPMX26_00023at 26.661 kb on - strand, within MPMX26_00023at 26.661 kb on - strand, within MPMX26_00023at 26.666 kb on - strand, within MPMX26_00023at 26.723 kb on - strand, within MPMX26_00023at 26.742 kb on - strand, within MPMX26_00023at 26.769 kb on - strand, within MPMX26_00023at 26.794 kb on - strandat 26.894 kb on - strandat 27.167 kb on + strandat 27.168 kb on + strandat 27.213 kb on + strandat 27.213 kb on + strandat 27.244 kb on + strandat 27.262 kb on + strandat 27.262 kb on + strandat 27.262 kb on + strandat 27.262 kb on + strandat 27.262 kb on + strandat 27.262 kb on + strandat 27.262 kb on + strandat 27.262 kb on + strandat 27.274 kb on + strandat 27.309 kb on - strandat 27.411 kb on + strand, within MPMX26_00024at 27.434 kb on + strand, within MPMX26_00024at 27.434 kb on + strand, within MPMX26_00024at 27.439 kb on + strand, within MPMX26_00024at 27.449 kb on + strand, within MPMX26_00024at 27.449 kb on + strand, within MPMX26_00024at 27.449 kb on + strand, within MPMX26_00024at 27.449 kb on + strand, within MPMX26_00024at 27.449 kb on + strand, within MPMX26_00024at 27.449 kb on + strand, within MPMX26_00024at 27.449 kb on + strand, within MPMX26_00024at 27.449 kb on + strand, within MPMX26_00024at 27.486 kb on + strand, within MPMX26_00024at 27.492 kb on + strand, within MPMX26_00024at 27.495 kb on + strand, within MPMX26_00024at 27.505 kb on + strand, within MPMX26_00024at 27.607 kb on - strand, within MPMX26_00024at 27.664 kb on - strand, within MPMX26_00024

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (N)
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25,239 - MPMX26_00021 0.80 +1.1
25,260 + MPMX26_00021 0.82 -0.5
25,260 + MPMX26_00021 0.82 +0.2
25,260 + MPMX26_00021 0.82 -0.0
25,260 + MPMX26_00021 0.82 +0.1
25,260 + MPMX26_00021 0.82 +0.4
25,260 + MPMX26_00021 0.82 +0.3
25,260 + MPMX26_00021 0.82 +0.7
25,260 + MPMX26_00021 0.82 -0.1
25,260 + MPMX26_00021 0.82 +0.2
25,260 + MPMX26_00021 0.82 +0.5
25,303 + MPMX26_00021 0.86 +0.9
25,316 + MPMX26_00021 0.87 -1.1
25,383 + +0.6
25,401 + -0.1
25,425 + -0.3
25,425 + +0.7
25,427 + -0.4
25,471 - +0.2
25,481 + +0.9
25,501 - +1.6
25,560 + +0.5
25,572 + +0.6
25,577 + -0.4
25,577 + -0.1
25,598 + +0.0
25,600 + +0.6
25,600 + -0.1
25,614 + +0.5
25,619 + MPMX26_00022 0.11 +0.0
25,624 + MPMX26_00022 0.12 -0.5
25,632 - MPMX26_00022 0.13 -0.5
25,655 + MPMX26_00022 0.17 +0.1
25,655 + MPMX26_00022 0.17 -0.4
25,655 + MPMX26_00022 0.17 -0.5
25,655 + MPMX26_00022 0.17 -1.0
25,663 - MPMX26_00022 0.18 +1.3
25,760 + MPMX26_00022 0.35 -0.3
25,769 + MPMX26_00022 0.36 +0.2
25,774 + MPMX26_00022 0.37 +0.3
25,774 + MPMX26_00022 0.37 -1.6
25,793 + MPMX26_00022 0.41 +0.6
25,803 + MPMX26_00022 0.42 +0.1
25,803 + MPMX26_00022 0.42 -0.9
25,863 - MPMX26_00022 0.53 +1.8
25,863 - MPMX26_00022 0.53 -0.2
25,866 + MPMX26_00022 0.53 -0.1
25,882 - MPMX26_00022 0.56 -1.0
25,898 + MPMX26_00022 0.59 +0.2
25,898 + MPMX26_00022 0.59 -0.1
25,906 - MPMX26_00022 0.60 -0.3
25,916 - MPMX26_00022 0.62 -0.5
25,938 - MPMX26_00022 0.65 +0.4
25,942 + MPMX26_00022 0.66 +0.7
25,964 + MPMX26_00022 0.70 +0.1
25,965 + MPMX26_00022 0.70 -0.1
25,966 + MPMX26_00022 0.70 -0.1
25,966 + MPMX26_00022 0.70 +0.1
25,974 - MPMX26_00022 0.72 +0.4
25,974 - MPMX26_00022 0.72 -1.4
25,974 - MPMX26_00022 0.72 +0.0
25,974 - MPMX26_00022 0.72 +0.8
25,974 - MPMX26_00022 0.72 +0.6
25,974 - MPMX26_00022 0.72 -0.8
25,974 - MPMX26_00022 0.72 +1.6
25,974 - MPMX26_00022 0.72 +0.9
25,974 - MPMX26_00022 0.72 +1.7
25,974 - MPMX26_00022 0.72 +0.7
25,974 - MPMX26_00022 0.72 -0.2
25,976 + MPMX26_00022 0.72 -1.3
25,984 - MPMX26_00022 0.73 -1.4
26,042 - MPMX26_00022 0.83 +0.1
26,042 - MPMX26_00022 0.83 +0.4
26,050 - MPMX26_00022 0.85 -0.3
26,050 - MPMX26_00022 0.85 -0.3
26,052 + MPMX26_00022 0.85 +0.9
26,052 + MPMX26_00022 0.85 +0.3
26,060 - MPMX26_00022 0.86 +0.7
26,060 - MPMX26_00022 0.86 +0.2
26,060 - MPMX26_00022 0.86 -0.6
26,060 - MPMX26_00022 0.86 +0.1
26,075 + MPMX26_00022 0.89 -0.6
26,086 - -0.0
26,086 - -0.5
26,086 - +0.7
26,086 - -0.4
26,086 - +0.0
26,108 - -0.1
26,109 - -0.4
26,166 - -0.2
26,230 - -0.3
26,230 - +0.5
26,247 - MPMX26_00023 0.11 +0.7
26,252 - MPMX26_00023 0.11 +0.3
26,255 - MPMX26_00023 0.12 +0.6
26,260 - MPMX26_00023 0.12 +0.5
26,268 - MPMX26_00023 0.14 +0.7
26,280 - MPMX26_00023 0.15 +0.8
26,280 - MPMX26_00023 0.15 +0.4
26,288 - MPMX26_00023 0.17 +1.1
26,295 - MPMX26_00023 0.18 +0.3
26,295 - MPMX26_00023 0.18 +0.5
26,357 - MPMX26_00023 0.27 -0.1
26,450 - MPMX26_00023 0.41 +0.7
26,450 - MPMX26_00023 0.41 +1.3
26,450 - MPMX26_00023 0.41 +0.5
26,450 - MPMX26_00023 0.41 +0.9
26,450 - MPMX26_00023 0.41 +0.8
26,450 - MPMX26_00023 0.41 +1.4
26,450 - MPMX26_00023 0.41 +0.7
26,450 - MPMX26_00023 0.41 +0.5
26,450 - MPMX26_00023 0.41 +0.5
26,450 - MPMX26_00023 0.41 +0.7
26,450 - MPMX26_00023 0.41 +1.3
26,450 - MPMX26_00023 0.41 +0.5
26,451 - MPMX26_00023 0.41 +1.1
26,510 - MPMX26_00023 0.50 +0.2
26,520 - MPMX26_00023 0.52 +0.1
26,520 - MPMX26_00023 0.52 +0.6
26,549 - MPMX26_00023 0.56 +0.7
26,555 - MPMX26_00023 0.57 +0.8
26,571 - MPMX26_00023 0.59 +0.3
26,576 - MPMX26_00023 0.60 +1.1
26,576 - MPMX26_00023 0.60 +1.0
26,619 - MPMX26_00023 0.66 +0.4
26,635 - MPMX26_00023 0.69 +0.6
26,635 - MPMX26_00023 0.69 +0.6
26,635 - MPMX26_00023 0.69 +1.1
26,635 - MPMX26_00023 0.69 +0.6
26,635 - MPMX26_00023 0.69 +0.2
26,637 - MPMX26_00023 0.69 +0.8
26,637 - MPMX26_00023 0.69 +1.6
26,643 - MPMX26_00023 0.70 +0.3
26,653 - MPMX26_00023 0.71 +0.8
26,653 - MPMX26_00023 0.71 +1.4
26,653 - MPMX26_00023 0.71 +2.0
26,653 - MPMX26_00023 0.71 +0.7
26,661 - MPMX26_00023 0.73 +0.1
26,661 - MPMX26_00023 0.73 +0.9
26,661 - MPMX26_00023 0.73 +0.7
26,666 - MPMX26_00023 0.73 +1.0
26,723 - MPMX26_00023 0.82 +0.5
26,742 - MPMX26_00023 0.85 +1.1
26,769 - MPMX26_00023 0.89 +0.2
26,794 - +0.9
26,894 - +0.7
27,167 + +0.6
27,168 + +0.3
27,213 + -0.4
27,213 + -0.1
27,244 + -1.0
27,262 + -1.2
27,262 + -0.8
27,262 + +0.1
27,262 + -2.3
27,262 + -0.3
27,262 + -0.4
27,262 + +0.0
27,262 + -0.2
27,274 + +0.4
27,309 - +0.5
27,411 + MPMX26_00024 0.19 +0.2
27,434 + MPMX26_00024 0.22 +1.4
27,434 + MPMX26_00024 0.22 -0.7
27,439 + MPMX26_00024 0.23 +0.3
27,449 + MPMX26_00024 0.24 +0.4
27,449 + MPMX26_00024 0.24 +0.3
27,449 + MPMX26_00024 0.24 +0.2
27,449 + MPMX26_00024 0.24 -1.1
27,449 + MPMX26_00024 0.24 -0.2
27,449 + MPMX26_00024 0.24 +0.2
27,449 + MPMX26_00024 0.24 -0.4
27,449 + MPMX26_00024 0.24 +0.3
27,486 + MPMX26_00024 0.29 -1.4
27,492 + MPMX26_00024 0.30 -0.4
27,495 + MPMX26_00024 0.30 +0.3
27,505 + MPMX26_00024 0.31 -0.1
27,607 - MPMX26_00024 0.44 -2.3
27,664 - MPMX26_00024 0.51 -0.6

Or see this region's nucleotide sequence