Experiment: supernatant control, M9 with 0.1X LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt COO64_RS02870 and COO64_RS02875 are separated by 39 nucleotides COO64_RS02875 and COO64_RS02880 are separated by 94 nucleotides COO64_RS02880 and COO64_RS02885 are separated by 361 nucleotides
COO64_RS02870: COO64_RS02870 - N-acetyltransferase, at 47,989 to 48,468
_RS02870
COO64_RS02875: COO64_RS02875 - DJ-1 family glyoxalase III, at 48,508 to 49,056
_RS02875
COO64_RS02880: COO64_RS02880 - MFS transporter, at 49,151 to 50,377
_RS02880
COO64_RS02885: COO64_RS02885 - cytochrome ubiquinol oxidase subunit I, at 50,739 to 52,178
_RS02885
Position (kb) 49
50
51 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 48.386 kb on - strand, within COO64_RS02870 at 48.439 kb on + strand at 48.439 kb on + strand at 48.440 kb on - strand at 48.474 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.483 kb on + strand at 48.484 kb on - strand at 48.484 kb on - strand at 48.484 kb on - strand at 48.484 kb on - strand at 48.484 kb on - strand at 48.484 kb on - strand at 48.484 kb on - strand at 48.488 kb on - strand at 48.488 kb on - strand at 48.602 kb on + strand, within COO64_RS02875 at 48.602 kb on + strand, within COO64_RS02875 at 48.603 kb on - strand, within COO64_RS02875 at 48.603 kb on - strand, within COO64_RS02875 at 48.844 kb on + strand, within COO64_RS02875 at 48.844 kb on + strand, within COO64_RS02875 at 48.845 kb on - strand, within COO64_RS02875 at 48.845 kb on - strand, within COO64_RS02875 at 48.942 kb on + strand, within COO64_RS02875 at 48.942 kb on + strand, within COO64_RS02875 at 48.942 kb on + strand, within COO64_RS02875 at 48.942 kb on + strand, within COO64_RS02875 at 48.943 kb on - strand, within COO64_RS02875 at 48.943 kb on - strand, within COO64_RS02875 at 48.943 kb on - strand, within COO64_RS02875 at 48.943 kb on - strand, within COO64_RS02875 at 48.943 kb on - strand, within COO64_RS02875 at 48.943 kb on - strand, within COO64_RS02875 at 49.174 kb on + strand at 49.174 kb on + strand at 49.174 kb on + strand at 49.174 kb on + strand at 49.175 kb on - strand at 49.175 kb on - strand at 49.175 kb on - strand at 49.175 kb on - strand at 49.823 kb on + strand, within COO64_RS02880 at 49.823 kb on + strand, within COO64_RS02880 at 49.839 kb on + strand, within COO64_RS02880 at 49.839 kb on + strand, within COO64_RS02880 at 49.839 kb on + strand, within COO64_RS02880 at 49.840 kb on - strand, within COO64_RS02880 at 49.860 kb on + strand, within COO64_RS02880 at 49.861 kb on - strand, within COO64_RS02880 at 49.861 kb on - strand, within COO64_RS02880 at 49.861 kb on - strand, within COO64_RS02880 at 49.861 kb on - strand, within COO64_RS02880 at 49.861 kb on - strand, within COO64_RS02880 at 49.861 kb on - strand, within COO64_RS02880 at 49.884 kb on + strand, within COO64_RS02880 at 49.885 kb on - strand, within COO64_RS02880 at 50.259 kb on + strand at 50.260 kb on - strand at 50.308 kb on + strand at 50.358 kb on - strand at 50.419 kb on + strand at 50.419 kb on + strand at 50.419 kb on + strand at 50.419 kb on + strand at 50.420 kb on - strand at 50.420 kb on - strand at 50.438 kb on + strand at 50.439 kb on - strand at 50.439 kb on - strand at 50.439 kb on - strand at 50.439 kb on - strand at 50.556 kb on + strand at 50.556 kb on + strand at 50.557 kb on - strand at 50.643 kb on + strand at 50.643 kb on + strand at 50.643 kb on + strand at 50.674 kb on + strand at 50.674 kb on + strand at 50.675 kb on - strand at 50.675 kb on - strand at 50.675 kb on - strand at 50.719 kb on + strand at 50.719 kb on + strand at 50.720 kb on - strand at 50.720 kb on - strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.738 kb on + strand at 50.739 kb on - strand at 50.739 kb on - strand at 50.739 kb on - strand at 50.739 kb on - strand at 50.739 kb on - strand at 50.739 kb on - strand at 50.739 kb on - strand at 50.739 kb on - strand at 50.739 kb on - strand at 50.749 kb on + strand at 50.750 kb on - strand at 50.758 kb on + strand at 50.758 kb on + strand at 50.759 kb on - strand at 50.759 kb on - strand at 50.759 kb on - strand at 50.759 kb on - strand at 50.838 kb on + strand at 50.838 kb on + strand at 50.838 kb on + strand at 50.838 kb on + strand at 50.838 kb on + strand at 50.838 kb on + strand at 50.839 kb on - strand at 50.839 kb on - strand at 50.839 kb on - strand at 50.839 kb on - strand at 50.898 kb on + strand, within COO64_RS02885 at 50.899 kb on - strand, within COO64_RS02885 at 50.967 kb on + strand, within COO64_RS02885 at 51.036 kb on + strand, within COO64_RS02885 at 51.036 kb on + strand, within COO64_RS02885 at 51.036 kb on + strand, within COO64_RS02885 at 51.036 kb on + strand, within COO64_RS02885 at 51.036 kb on + strand, within COO64_RS02885 at 51.036 kb on + strand, within COO64_RS02885 at 51.036 kb on + strand, within COO64_RS02885 at 51.036 kb on + strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.037 kb on - strand, within COO64_RS02885 at 51.043 kb on + strand, within COO64_RS02885 at 51.043 kb on + strand, within COO64_RS02885 at 51.044 kb on - strand, within COO64_RS02885
Per-strain Table
Position Strand Gene LocusTag Fraction supernatant control, M9 with 0.1X LB remove 48,386 - COO64_RS02870 0.83 -0.8 48,439 + -1.2 48,439 + +0.1 48,440 - -2.1 48,474 + +0.3 48,483 + -0.4 48,483 + -0.2 48,483 + +1.0 48,483 + +0.4 48,483 + +1.6 48,483 + -0.7 48,483 + +0.0 48,483 + +0.4 48,483 + +0.8 48,483 + +0.6 48,483 + +1.2 48,483 + -1.4 48,483 + -1.8 48,483 + +0.5 48,483 + +1.0 48,483 + -0.9 48,484 - -1.3 48,484 - +0.1 48,484 - +0.0 48,484 - -0.3 48,484 - -0.0 48,484 - +0.2 48,484 - +0.7 48,488 - -0.5 48,488 - -0.5 48,602 + COO64_RS02875 0.17 -0.5 48,602 + COO64_RS02875 0.17 -0.3 48,603 - COO64_RS02875 0.17 -0.5 48,603 - COO64_RS02875 0.17 -0.0 48,844 + COO64_RS02875 0.61 -0.3 48,844 + COO64_RS02875 0.61 -1.1 48,845 - COO64_RS02875 0.61 +0.2 48,845 - COO64_RS02875 0.61 -0.5 48,942 + COO64_RS02875 0.79 -0.7 48,942 + COO64_RS02875 0.79 -0.8 48,942 + COO64_RS02875 0.79 -0.1 48,942 + COO64_RS02875 0.79 -0.1 48,943 - COO64_RS02875 0.79 -0.8 48,943 - COO64_RS02875 0.79 -0.3 48,943 - COO64_RS02875 0.79 +0.3 48,943 - COO64_RS02875 0.79 -0.3 48,943 - COO64_RS02875 0.79 -0.2 48,943 - COO64_RS02875 0.79 +0.4 49,174 + -0.1 49,174 + -0.5 49,174 + -0.9 49,174 + -1.1 49,175 - +0.9 49,175 - -0.0 49,175 - +0.0 49,175 - -0.5 49,823 + COO64_RS02880 0.55 +1.0 49,823 + COO64_RS02880 0.55 -1.1 49,839 + COO64_RS02880 0.56 +0.3 49,839 + COO64_RS02880 0.56 +1.1 49,839 + COO64_RS02880 0.56 -0.4 49,840 - COO64_RS02880 0.56 -0.8 49,860 + COO64_RS02880 0.58 +0.8 49,861 - COO64_RS02880 0.58 +1.8 49,861 - COO64_RS02880 0.58 -0.2 49,861 - COO64_RS02880 0.58 -0.1 49,861 - COO64_RS02880 0.58 -0.1 49,861 - COO64_RS02880 0.58 +0.2 49,861 - COO64_RS02880 0.58 -0.5 49,884 + COO64_RS02880 0.60 -0.8 49,885 - COO64_RS02880 0.60 +0.2 50,259 + +0.0 50,260 - -0.1 50,308 + -0.6 50,358 - +0.1 50,419 + +0.2 50,419 + +0.1 50,419 + -0.3 50,419 + -1.3 50,420 - +0.2 50,420 - -0.5 50,438 + +1.7 50,439 - +0.3 50,439 - -0.7 50,439 - +0.9 50,439 - +0.5 50,556 + +0.5 50,556 + +1.1 50,557 - +1.1 50,643 + -1.0 50,643 + +0.5 50,643 + +0.0 50,674 + -0.4 50,674 + +0.5 50,675 - +0.2 50,675 - +0.2 50,675 - +0.3 50,719 + +0.2 50,719 + +0.2 50,720 - -1.1 50,720 - +1.5 50,738 + -0.2 50,738 + +0.7 50,738 + +1.5 50,738 + -0.9 50,738 + -0.1 50,738 + +0.2 50,738 + -0.4 50,738 + +1.0 50,738 + -0.2 50,738 + +0.8 50,738 + +1.5 50,738 + +0.5 50,738 + -0.3 50,739 - -1.1 50,739 - -0.8 50,739 - -0.2 50,739 - +1.0 50,739 - +1.7 50,739 - +0.8 50,739 - -0.2 50,739 - -0.4 50,739 - +2.0 50,749 + -0.3 50,750 - -0.3 50,758 + -1.4 50,758 + -0.4 50,759 - +0.0 50,759 - +0.4 50,759 - -0.7 50,759 - -1.7 50,838 + -0.3 50,838 + -0.5 50,838 + -0.1 50,838 + +0.8 50,838 + +0.2 50,838 + +0.2 50,839 - +0.2 50,839 - -0.2 50,839 - -0.9 50,839 - +0.3 50,898 + COO64_RS02885 0.11 +2.0 50,899 - COO64_RS02885 0.11 -1.5 50,967 + COO64_RS02885 0.16 -0.9 51,036 + COO64_RS02885 0.21 +0.5 51,036 + COO64_RS02885 0.21 -0.6 51,036 + COO64_RS02885 0.21 +0.1 51,036 + COO64_RS02885 0.21 +0.2 51,036 + COO64_RS02885 0.21 +0.4 51,036 + COO64_RS02885 0.21 -0.0 51,036 + COO64_RS02885 0.21 -0.5 51,036 + COO64_RS02885 0.21 -0.7 51,037 - COO64_RS02885 0.21 -0.5 51,037 - COO64_RS02885 0.21 +3.0 51,037 - COO64_RS02885 0.21 +1.6 51,037 - COO64_RS02885 0.21 +0.1 51,037 - COO64_RS02885 0.21 -0.5 51,037 - COO64_RS02885 0.21 -0.5 51,037 - COO64_RS02885 0.21 +0.5 51,037 - COO64_RS02885 0.21 -2.0 51,037 - COO64_RS02885 0.21 +0.2 51,037 - COO64_RS02885 0.21 -0.3 51,037 - COO64_RS02885 0.21 -0.8 51,037 - COO64_RS02885 0.21 -0.1 51,043 + COO64_RS02885 0.21 -0.1 51,043 + COO64_RS02885 0.21 +1.3 51,044 - COO64_RS02885 0.21 +1.0
Or see this region's nucleotide sequence