Experiment: Glucomannan (konjac) 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03231 and BACOVA_03232 are separated by 309 nucleotides BACOVA_03232 and BACOVA_03233 are separated by 179 nucleotides
BACOVA_03231: BACOVA_03231 - hypothetical protein, at 320,102 to 320,848
_03231
BACOVA_03232: BACOVA_03232 - hypothetical protein, at 321,158 to 321,664
_03232
BACOVA_03233: BACOVA_03233 - glucose-6-phosphate isomerase, at 321,844 to 323,181
_03233
Position (kb) 321
322 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 320.181 kb on + strand, within BACOVA_03231 at 320.187 kb on + strand, within BACOVA_03231 at 320.187 kb on + strand, within BACOVA_03231 at 320.188 kb on - strand, within BACOVA_03231 at 320.188 kb on - strand, within BACOVA_03231 at 320.228 kb on + strand, within BACOVA_03231 at 320.271 kb on + strand, within BACOVA_03231 at 320.272 kb on + strand, within BACOVA_03231 at 320.342 kb on + strand, within BACOVA_03231 at 320.344 kb on + strand, within BACOVA_03231 at 320.345 kb on - strand, within BACOVA_03231 at 320.345 kb on - strand, within BACOVA_03231 at 320.346 kb on + strand, within BACOVA_03231 at 320.346 kb on + strand, within BACOVA_03231 at 320.347 kb on - strand, within BACOVA_03231 at 320.363 kb on + strand, within BACOVA_03231 at 320.363 kb on + strand, within BACOVA_03231 at 320.482 kb on + strand, within BACOVA_03231 at 320.485 kb on + strand, within BACOVA_03231 at 320.549 kb on + strand, within BACOVA_03231 at 320.555 kb on + strand, within BACOVA_03231 at 320.555 kb on + strand, within BACOVA_03231 at 320.556 kb on - strand, within BACOVA_03231 at 320.564 kb on + strand, within BACOVA_03231 at 320.642 kb on - strand, within BACOVA_03231 at 320.681 kb on + strand, within BACOVA_03231 at 320.681 kb on + strand, within BACOVA_03231 at 320.681 kb on + strand, within BACOVA_03231 at 320.681 kb on + strand, within BACOVA_03231 at 320.683 kb on + strand, within BACOVA_03231 at 320.716 kb on - strand, within BACOVA_03231 at 320.720 kb on + strand, within BACOVA_03231 at 320.720 kb on + strand, within BACOVA_03231 at 320.721 kb on - strand, within BACOVA_03231 at 320.721 kb on - strand, within BACOVA_03231 at 320.725 kb on + strand, within BACOVA_03231 at 320.774 kb on + strand at 320.850 kb on - strand at 320.858 kb on + strand at 320.859 kb on - strand at 320.863 kb on + strand at 320.867 kb on + strand at 320.871 kb on - strand at 320.946 kb on - strand at 320.955 kb on + strand at 320.956 kb on - strand at 320.988 kb on + strand at 320.988 kb on + strand at 320.989 kb on - strand at 320.989 kb on - strand at 321.006 kb on + strand at 321.011 kb on + strand at 321.029 kb on + strand at 321.029 kb on + strand at 321.029 kb on + strand at 321.030 kb on - strand at 321.030 kb on - strand at 321.030 kb on - strand at 321.032 kb on + strand at 321.032 kb on + strand at 321.032 kb on + strand at 321.033 kb on - strand at 321.033 kb on - strand at 321.049 kb on + strand at 321.075 kb on - strand at 321.095 kb on + strand at 321.096 kb on - strand at 321.098 kb on - strand at 321.101 kb on + strand at 321.155 kb on - strand at 321.155 kb on - strand at 321.155 kb on - strand at 321.172 kb on - strand at 321.172 kb on - strand at 321.174 kb on + strand at 321.174 kb on + strand at 321.174 kb on + strand at 321.174 kb on + strand at 321.175 kb on - strand at 321.183 kb on + strand at 321.183 kb on + strand at 321.196 kb on + strand at 321.229 kb on + strand, within BACOVA_03232 at 321.229 kb on + strand, within BACOVA_03232 at 321.248 kb on + strand, within BACOVA_03232 at 321.425 kb on - strand, within BACOVA_03232 at 321.427 kb on + strand, within BACOVA_03232 at 321.427 kb on + strand, within BACOVA_03232 at 321.433 kb on + strand, within BACOVA_03232 at 321.434 kb on - strand, within BACOVA_03232 at 321.453 kb on + strand, within BACOVA_03232 at 321.458 kb on - strand, within BACOVA_03232 at 321.555 kb on + strand, within BACOVA_03232 at 321.559 kb on + strand, within BACOVA_03232 at 321.560 kb on - strand, within BACOVA_03232 at 321.560 kb on - strand, within BACOVA_03232 at 321.580 kb on - strand, within BACOVA_03232 at 321.587 kb on + strand, within BACOVA_03232 at 321.588 kb on - strand, within BACOVA_03232 at 321.636 kb on + strand at 321.658 kb on + strand at 321.659 kb on - strand at 321.679 kb on + strand at 321.694 kb on + strand at 321.714 kb on - strand at 321.714 kb on - strand at 321.758 kb on + strand at 321.784 kb on + strand at 321.784 kb on + strand at 321.785 kb on - strand at 321.785 kb on - strand at 321.785 kb on - strand at 321.785 kb on - strand at 321.786 kb on + strand at 321.786 kb on + strand at 321.786 kb on + strand at 321.787 kb on - strand at 321.787 kb on - strand at 321.791 kb on + strand at 321.791 kb on + strand at 321.791 kb on + strand at 321.791 kb on + strand at 321.792 kb on - strand at 321.792 kb on - strand at 321.813 kb on + strand at 321.827 kb on + strand at 321.828 kb on - strand at 321.868 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucomannan (konjac) 2.5 mg/mL (C) remove 320,181 + BACOVA_03231 0.11 -0.9 320,187 + BACOVA_03231 0.11 -0.5 320,187 + BACOVA_03231 0.11 +0.9 320,188 - BACOVA_03231 0.12 -0.0 320,188 - BACOVA_03231 0.12 -1.2 320,228 + BACOVA_03231 0.17 +1.3 320,271 + BACOVA_03231 0.23 -0.2 320,272 + BACOVA_03231 0.23 -0.4 320,342 + BACOVA_03231 0.32 +0.0 320,344 + BACOVA_03231 0.32 -0.0 320,345 - BACOVA_03231 0.33 +2.1 320,345 - BACOVA_03231 0.33 +0.6 320,346 + BACOVA_03231 0.33 +0.4 320,346 + BACOVA_03231 0.33 -0.0 320,347 - BACOVA_03231 0.33 +0.0 320,363 + BACOVA_03231 0.35 +0.3 320,363 + BACOVA_03231 0.35 -0.5 320,482 + BACOVA_03231 0.51 -2.1 320,485 + BACOVA_03231 0.51 +0.5 320,549 + BACOVA_03231 0.60 -0.4 320,555 + BACOVA_03231 0.61 -1.0 320,555 + BACOVA_03231 0.61 -0.5 320,556 - BACOVA_03231 0.61 -0.2 320,564 + BACOVA_03231 0.62 +0.2 320,642 - BACOVA_03231 0.72 -0.1 320,681 + BACOVA_03231 0.78 -0.2 320,681 + BACOVA_03231 0.78 +0.9 320,681 + BACOVA_03231 0.78 +0.7 320,681 + BACOVA_03231 0.78 +0.4 320,683 + BACOVA_03231 0.78 +0.2 320,716 - BACOVA_03231 0.82 -1.5 320,720 + BACOVA_03231 0.83 -0.0 320,720 + BACOVA_03231 0.83 -0.2 320,721 - BACOVA_03231 0.83 -0.6 320,721 - BACOVA_03231 0.83 +0.5 320,725 + BACOVA_03231 0.83 +0.6 320,774 + +0.8 320,850 - -0.5 320,858 + -1.2 320,859 - +0.6 320,863 + -0.8 320,867 + +0.3 320,871 - -1.8 320,946 - -1.0 320,955 + -1.1 320,956 - -0.6 320,988 + +1.5 320,988 + +0.1 320,989 - +0.8 320,989 - -1.2 321,006 + +0.5 321,011 + +0.8 321,029 + -0.3 321,029 + -1.5 321,029 + -1.8 321,030 - +0.2 321,030 - -0.2 321,030 - +0.5 321,032 + +0.7 321,032 + +0.4 321,032 + -0.5 321,033 - -1.2 321,033 - -0.9 321,049 + +2.0 321,075 - -1.5 321,095 + +0.8 321,096 - +0.0 321,098 - -0.9 321,101 + -0.9 321,155 - -1.3 321,155 - -1.2 321,155 - +0.2 321,172 - -1.0 321,172 - +0.2 321,174 + +0.4 321,174 + +0.2 321,174 + +0.1 321,174 + +0.3 321,175 - +0.7 321,183 + -0.7 321,183 + -0.6 321,196 + -1.3 321,229 + BACOVA_03232 0.14 +1.3 321,229 + BACOVA_03232 0.14 -0.1 321,248 + BACOVA_03232 0.18 -1.9 321,425 - BACOVA_03232 0.53 +1.6 321,427 + BACOVA_03232 0.53 +0.7 321,427 + BACOVA_03232 0.53 +0.3 321,433 + BACOVA_03232 0.54 -0.2 321,434 - BACOVA_03232 0.54 -0.7 321,453 + BACOVA_03232 0.58 +0.0 321,458 - BACOVA_03232 0.59 -0.7 321,555 + BACOVA_03232 0.78 -0.4 321,559 + BACOVA_03232 0.79 -1.3 321,560 - BACOVA_03232 0.79 +0.6 321,560 - BACOVA_03232 0.79 -0.0 321,580 - BACOVA_03232 0.83 -0.9 321,587 + BACOVA_03232 0.85 -0.1 321,588 - BACOVA_03232 0.85 -0.4 321,636 + -1.9 321,658 + -0.6 321,659 - -0.2 321,679 + +1.4 321,694 + -2.6 321,714 - -0.6 321,714 - -0.2 321,758 + -0.2 321,784 + -0.6 321,784 + -1.3 321,785 - +0.5 321,785 - -0.7 321,785 - +0.1 321,785 - -0.3 321,786 + +0.2 321,786 + -0.1 321,786 + -0.8 321,787 - -0.0 321,787 - +0.3 321,791 + -0.4 321,791 + -4.3 321,791 + -0.9 321,791 + +0.3 321,792 - -0.5 321,792 - +0.0 321,813 + -1.0 321,827 + -3.2 321,828 - -1.2 321,868 - -0.9
Or see this region's nucleotide sequence