Experiment: Glucomannan (konjac) 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03202 and BACOVA_03203 are separated by 127 nucleotides BACOVA_03203 and BACOVA_03204 are separated by 77 nucleotides BACOVA_03204 and BACOVA_03205 are separated by 9 nucleotides
BACOVA_03202: BACOVA_03202 - chromosomal replication initiator protein DnaA, at 293,713 to 295,125
_03202
BACOVA_03203: BACOVA_03203 - hypothetical protein, at 295,253 to 295,399
_03203
BACOVA_03204: BACOVA_03204 - hypothetical protein, at 295,477 to 296,370
_03204
BACOVA_03205: BACOVA_03205 - N-acetylmuramoyl-L-alanine amidase, at 296,380 to 297,639
_03205
Position (kb) 295
296 Strain fitness (log2 ratio) -2
-1
0
1 at 295.165 kb on - strand at 295.289 kb on - strand, within BACOVA_03203 at 295.339 kb on + strand, within BACOVA_03203 at 295.422 kb on - strand at 295.547 kb on - strand at 295.582 kb on - strand, within BACOVA_03204 at 295.586 kb on + strand, within BACOVA_03204 at 295.587 kb on - strand, within BACOVA_03204 at 295.588 kb on + strand, within BACOVA_03204 at 295.624 kb on - strand, within BACOVA_03204 at 295.777 kb on + strand, within BACOVA_03204 at 295.778 kb on - strand, within BACOVA_03204 at 295.883 kb on - strand, within BACOVA_03204 at 295.906 kb on - strand, within BACOVA_03204 at 295.933 kb on + strand, within BACOVA_03204 at 295.934 kb on - strand, within BACOVA_03204 at 295.995 kb on + strand, within BACOVA_03204 at 296.040 kb on + strand, within BACOVA_03204 at 296.040 kb on + strand, within BACOVA_03204 at 296.061 kb on + strand, within BACOVA_03204 at 296.156 kb on + strand, within BACOVA_03204 at 296.159 kb on + strand, within BACOVA_03204 at 296.162 kb on + strand, within BACOVA_03204 at 296.163 kb on - strand, within BACOVA_03204 at 296.163 kb on - strand, within BACOVA_03204 at 296.163 kb on - strand, within BACOVA_03204 at 296.179 kb on - strand, within BACOVA_03204 at 296.183 kb on - strand, within BACOVA_03204 at 296.230 kb on + strand, within BACOVA_03204 at 296.249 kb on + strand, within BACOVA_03204 at 296.250 kb on - strand, within BACOVA_03204 at 296.255 kb on + strand, within BACOVA_03204 at 296.256 kb on - strand, within BACOVA_03204 at 296.278 kb on + strand, within BACOVA_03204 at 296.278 kb on + strand, within BACOVA_03204 at 296.304 kb on - strand at 296.308 kb on - strand at 296.329 kb on - strand at 296.338 kb on - strand at 296.386 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glucomannan (konjac) 2.5 mg/mL (C) remove 295,165 - -0.4 295,289 - BACOVA_03203 0.24 +1.1 295,339 + BACOVA_03203 0.59 -0.8 295,422 - +1.3 295,547 - -0.0 295,582 - BACOVA_03204 0.12 -0.1 295,586 + BACOVA_03204 0.12 +0.1 295,587 - BACOVA_03204 0.12 -0.3 295,588 + BACOVA_03204 0.12 -1.0 295,624 - BACOVA_03204 0.16 +0.4 295,777 + BACOVA_03204 0.34 -0.0 295,778 - BACOVA_03204 0.34 -0.0 295,883 - BACOVA_03204 0.45 -1.2 295,906 - BACOVA_03204 0.48 +0.4 295,933 + BACOVA_03204 0.51 -1.5 295,934 - BACOVA_03204 0.51 -1.5 295,995 + BACOVA_03204 0.58 +0.3 296,040 + BACOVA_03204 0.63 -0.6 296,040 + BACOVA_03204 0.63 -0.8 296,061 + BACOVA_03204 0.65 -1.1 296,156 + BACOVA_03204 0.76 -0.8 296,159 + BACOVA_03204 0.76 -2.7 296,162 + BACOVA_03204 0.77 +0.1 296,163 - BACOVA_03204 0.77 -0.3 296,163 - BACOVA_03204 0.77 +1.0 296,163 - BACOVA_03204 0.77 -0.9 296,179 - BACOVA_03204 0.79 -1.9 296,183 - BACOVA_03204 0.79 -1.5 296,230 + BACOVA_03204 0.84 +1.0 296,249 + BACOVA_03204 0.86 +0.7 296,250 - BACOVA_03204 0.86 +0.3 296,255 + BACOVA_03204 0.87 -1.5 296,256 - BACOVA_03204 0.87 -0.4 296,278 + BACOVA_03204 0.90 +0.4 296,278 + BACOVA_03204 0.90 -0.8 296,304 - -1.3 296,308 - +0.4 296,329 - +0.1 296,338 - +0.6 296,386 - -0.2
Or see this region's nucleotide sequence